RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 PRKG2Q13237 762 aa18.38■□□□□ 0.53
SFSWAP-207ENST00000538548 NOMO2Q5JPE7 1267 aa18.38■□□□□ 0.53
SFSWAP-207ENST00000538548 OSTM1Q86WC4 334 aa18.38■□□□□ 0.53
SFSWAP-207ENST00000538548 ZFAND4Q86XD8 727 aa18.38■□□□□ 0.53
SFSWAP-207ENST00000538548 FAM86B1Q8N7N1 296 aa18.38■□□□□ 0.53
SFSWAP-207ENST00000538548 POC5Q8NA72 575 aa18.38■□□□□ 0.53
SFSWAP-207ENST00000538548 CNIH3Q8TBE1 160 aa18.38■□□□□ 0.53
SFSWAP-207ENST00000538548 PABPC5Q96DU9 382 aaKnown RBP18.38■□□□□ 0.53
SFSWAP-207ENST00000538548 ATOH8Q96SQ7 321 aa18.38■□□□□ 0.53
SFSWAP-207ENST00000538548 NUSAP1Q9BXS6 441 aaKnown RBP18.38■□□□□ 0.53
SFSWAP-207ENST00000538548 GORASP2Q9H8Y8 452 aa18.38■□□□□ 0.53
SFSWAP-207ENST00000538548 RNF19AQ9NV58 838 aa18.38■□□□□ 0.53
SFSWAP-207ENST00000538548 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.38■□□□□ 0.533e-7■□□□□ 9.3
SFSWAP-207ENST00000538548 TIMM22Q9Y584 194 aa18.38■□□□□ 0.53
SFSWAP-207ENST00000538548 TAF4O00268 1085 aa18.37■□□□□ 0.53
SFSWAP-207ENST00000538548 CD4P01730 458 aa18.37■□□□□ 0.53
SFSWAP-207ENST00000538548 FSHRP23945 695 aa18.37■□□□□ 0.53
SFSWAP-207ENST00000538548 CD6P30203 668 aa18.37■□□□□ 0.53
SFSWAP-207ENST00000538548 PNPLA4P41247 253 aa18.37■□□□□ 0.53
SFSWAP-207ENST00000538548 CASP3P42574 277 aa18.37■□□□□ 0.53
SFSWAP-207ENST00000538548 SELPLGQ14242 412 aa18.37■□□□□ 0.53
SFSWAP-207ENST00000538548 C9orf131Q5VYM1 1079 aa18.37■□□□□ 0.53
SFSWAP-207ENST00000538548 ANKRD34AQ69YU3 496 aa18.37■□□□□ 0.53
SFSWAP-207ENST00000538548 EFL1Q7Z2Z2 1120 aaKnown RBP18.37■□□□□ 0.53
SFSWAP-207ENST00000538548 MCFD2Q8NI22 146 aa18.37■□□□□ 0.53
SFSWAP-207ENST00000538548 PROKR1Q8TCW9 393 aa18.37■□□□□ 0.53
SFSWAP-207ENST00000538548 LGALS12Q96DT0 336 aa18.37■□□□□ 0.53
SFSWAP-207ENST00000538548 PPM1MQ96MI6 270 aa18.37■□□□□ 0.53
SFSWAP-207ENST00000538548 ZNF599Q96NL3 588 aa18.37■□□□□ 0.53
SFSWAP-207ENST00000538548 MFSD1Q9H3U5 465 aa18.37■□□□□ 0.53
SFSWAP-207ENST00000538548 ARNT2Q9HBZ2 717 aa18.37■□□□□ 0.53
SFSWAP-207ENST00000538548 EXD2Q9NVH0 621 aa18.37■□□□□ 0.53
SFSWAP-207ENST00000538548 RBM22Q9NW64 420 aaKnown RBP eCLIP18.37■□□□□ 0.535e-11■■■■■ 35.9
SFSWAP-207ENST00000538548 ERVK-18Q9QC07 812 aa18.37■□□□□ 0.53
SFSWAP-207ENST00000538548 PRKD3O94806 890 aa18.37■□□□□ 0.53
SFSWAP-207ENST00000538548 MAP2K4P45985 399 aa18.37■□□□□ 0.53
SFSWAP-207ENST00000538548 TAF6P49848 677 aa18.37■□□□□ 0.53
SFSWAP-207ENST00000538548 WNT3AP56704 352 aa18.37■□□□□ 0.53
SFSWAP-207ENST00000538548 VAC14Q08AM6 782 aa18.37■□□□□ 0.53
SFSWAP-207ENST00000538548 CLCA4Q14CN2 919 aa18.37■□□□□ 0.53
SFSWAP-207ENST00000538548 NPTX1Q15818 432 aa18.37■□□□□ 0.53
SFSWAP-207ENST00000538548 RFX4Q33E94 735 aa18.37■□□□□ 0.53
SFSWAP-207ENST00000538548 ZC3H12BQ5HYM0 836 aaKnown RBP18.37■□□□□ 0.53
SFSWAP-207ENST00000538548 STEAP3Q658P3 488 aa18.37■□□□□ 0.53
SFSWAP-207ENST00000538548 ENPP6Q6UWR7 440 aa18.37■□□□□ 0.53
SFSWAP-207ENST00000538548 ALKAL1Q6UXT8 129 aa18.37■□□□□ 0.53
SFSWAP-207ENST00000538548 USP43Q70EL4 1123 aa18.37■□□□□ 0.53
SFSWAP-207ENST00000538548 NECAB2Q7Z6G3 386 aa18.37■□□□□ 0.53
SFSWAP-207ENST00000538548 PLD3Q8IV08 490 aa18.37■□□□□ 0.53
SFSWAP-207ENST00000538548 KIAA1958Q8N8K9 716 aa18.37■□□□□ 0.53
SFSWAP-207ENST00000538548 OR6P1Q8NGX9 317 aa18.37■□□□□ 0.53
SFSWAP-207ENST00000538548 DUSP21Q9H596 190 aa18.37■□□□□ 0.53
SFSWAP-207ENST00000538548 SEMA4BQ9NPR2 832 aaPredicted RBP18.37■□□□□ 0.53
SFSWAP-207ENST00000538548 CNGB3Q9NQW8 809 aa18.37■□□□□ 0.53
SFSWAP-207ENST00000538548 TPRKBQ9Y3C4 175 aa18.37■□□□□ 0.53
SFSWAP-207ENST00000538548 CENPBD1B2RD01 187 aa18.36■□□□□ 0.53
SFSWAP-207ENST00000538548 PRMT5O14744 637 aaPredicted RBP18.36■□□□□ 0.53
SFSWAP-207ENST00000538548 BCKDKO14874 412 aa18.36■□□□□ 0.53
SFSWAP-207ENST00000538548 SLC4A1P02730 911 aa18.36■□□□□ 0.53
SFSWAP-207ENST00000538548 PSMB9P28065 219 aa18.36■□□□□ 0.53
SFSWAP-207ENST00000538548 SERPINH1P50454 418 aaKnown RBP18.36■□□□□ 0.53
SFSWAP-207ENST00000538548 SLC35A2P78381 396 aa18.36■□□□□ 0.53
SFSWAP-207ENST00000538548 IL5RAQ01344 420 aa18.36■□□□□ 0.53
SFSWAP-207ENST00000538548 DGCR6Q14129 220 aa18.36■□□□□ 0.53
SFSWAP-207ENST00000538548 PCSK7Q16549 785 aa18.36■□□□□ 0.53
SFSWAP-207ENST00000538548 NKG7Q16617 165 aa18.36■□□□□ 0.53
SFSWAP-207ENST00000538548 DCP2Q8IU60 420 aaKnown RBP18.36■□□□□ 0.53
SFSWAP-207ENST00000538548 EID3Q8N140 333 aa18.36■□□□□ 0.53
SFSWAP-207ENST00000538548 FBXO30Q8TB52 745 aa18.36■□□□□ 0.53
SFSWAP-207ENST00000538548 MED10Q9BTT4 135 aa18.36■□□□□ 0.53
SFSWAP-207ENST00000538548 TFB2MQ9H5Q4 396 aaKnown RBP18.36■□□□□ 0.53
SFSWAP-207ENST00000538548 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.36■□□□□ 0.53
SFSWAP-207ENST00000538548 CRYL1Q9Y2S2 319 aa18.36■□□□□ 0.53
SFSWAP-207ENST00000538548 FAM172BPA6NC97 362 aa18.36■□□□□ 0.53
SFSWAP-207ENST00000538548 ZNF37AP17032 561 aaPredicted RBP18.36■□□□□ 0.53
SFSWAP-207ENST00000538548 JUNDP17535 347 aa18.36■□□□□ 0.53
SFSWAP-207ENST00000538548 POLR2EP19388 210 aaKnown RBP18.36■□□□□ 0.53
SFSWAP-207ENST00000538548 WARSP23381 471 aaKnown RBP18.36■□□□□ 0.53
SFSWAP-207ENST00000538548 COPZ1P61923 177 aa18.36■□□□□ 0.53
SFSWAP-207ENST00000538548 LAPTM5Q13571 262 aa18.36■□□□□ 0.53
SFSWAP-207ENST00000538548 SLC27A1Q6PCB7 646 aa18.36■□□□□ 0.53
SFSWAP-207ENST00000538548 TAS2R42Q7RTR8 314 aa18.36■□□□□ 0.53
SFSWAP-207ENST00000538548 HEATR4Q86WZ0 1026 aa18.36■□□□□ 0.53
SFSWAP-207ENST00000538548 OR5K1Q8NHB7 308 aa18.36■□□□□ 0.53
SFSWAP-207ENST00000538548 FIG4Q92562 907 aa18.36■□□□□ 0.53
SFSWAP-207ENST00000538548 SLC47A1Q96FL8 570 aa18.36■□□□□ 0.53
SFSWAP-207ENST00000538548 ORC6Q9Y5N6 252 aa18.36■□□□□ 0.53
SFSWAP-207ENST00000538548 MN1Q10571 1320 aaPredicted RBP18.36■□□□□ 0.53
SFSWAP-207ENST00000538548 H0Y626 953 aa18.36■□□□□ 0.53
SFSWAP-207ENST00000538548 TBX1O43435 398 aa18.36■□□□□ 0.53
SFSWAP-207ENST00000538548 TRIM16O95361 564 aa18.36■□□□□ 0.53
SFSWAP-207ENST00000538548 CYP11A1P05108 521 aa18.36■□□□□ 0.53
SFSWAP-207ENST00000538548 CCNA1P78396 465 aa18.36■□□□□ 0.53
SFSWAP-207ENST00000538548 ANKS6Q68DC2 871 aa18.36■□□□□ 0.53
SFSWAP-207ENST00000538548 ADHFE1Q8IWW8 467 aa18.36■□□□□ 0.53
SFSWAP-207ENST00000538548 SETD9Q8NE22 299 aa18.36■□□□□ 0.53
SFSWAP-207ENST00000538548 FRS2Q8WU20 508 aa18.36■□□□□ 0.53
SFSWAP-207ENST00000538548 TP53INP1Q96A56 240 aa18.36■□□□□ 0.53
SFSWAP-207ENST00000538548 ZHX1-C8orf76Q96EF9 292 aa18.36■□□□□ 0.53
SFSWAP-207ENST00000538548 ZNF583Q96ND8 569 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms