RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 EBF3Q9H4W6 596 aa15.45■□□□□ 0.06
MKS1-204ENST00000537529 ZDHHC6Q9H6R6 413 aa15.45■□□□□ 0.06
MKS1-204ENST00000537529 NOL11Q9H8H0 719 aaKnown RBP15.45■□□□□ 0.06
MKS1-204ENST00000537529 SPATS2LQ9NUQ6 558 aaKnown RBP15.45■□□□□ 0.06
MKS1-204ENST00000537529 RIMS3Q9UJD0 308 aa15.45■□□□□ 0.06
MKS1-204ENST00000537529 PRORSD1PA6NEY8 169 aa15.44■□□□□ 0.06
MKS1-204ENST00000537529 NEDD8-MDP1E9PL57 170 aa15.44■□□□□ 0.06
MKS1-204ENST00000537529 POP4O95707 220 aaKnown RBP15.44■□□□□ 0.06
MKS1-204ENST00000537529 HSPA8P11142 646 aaKnown RBP15.44■□□□□ 0.06
MKS1-204ENST00000537529 PABPC1P11940 636 aaKnown RBP15.44■□□□□ 0.06
MKS1-204ENST00000537529 UQCRBP14927 111 aa15.44■□□□□ 0.06
MKS1-204ENST00000537529 ARL1P40616 181 aaPredicted RBP15.44■□□□□ 0.06
MKS1-204ENST00000537529 CCNHP51946 323 aaPredicted RBP15.44■□□□□ 0.06
MKS1-204ENST00000537529 ERVPABLB-1P60509 514 aa15.44■□□□□ 0.06
MKS1-204ENST00000537529 ERVK-8P63133 956 aa15.44■□□□□ 0.06
MKS1-204ENST00000537529 FOXM1Q08050 763 aa15.44■□□□□ 0.06
MKS1-204ENST00000537529 GTF2H2Q13888 395 aa15.44■□□□□ 0.06
MKS1-204ENST00000537529 TEAD2Q15562 447 aa15.44■□□□□ 0.06
MKS1-204ENST00000537529 VPS26BQ4G0F5 336 aa15.44■□□□□ 0.06
MKS1-204ENST00000537529 GPRC6AQ5T6X5 926 aa15.44■□□□□ 0.06
MKS1-204ENST00000537529 PLPP4Q5VZY2 271 aa15.44■□□□□ 0.06
MKS1-204ENST00000537529 ZDHHC20Q5W0Z9 365 aa15.44■□□□□ 0.06
MKS1-204ENST00000537529 GTF2H2CQ6P1K8 395 aa15.44■□□□□ 0.06
MKS1-204ENST00000537529 BLOC1S3Q6QNY0 202 aa15.44■□□□□ 0.06
MKS1-204ENST00000537529 TMEM25Q86YD3 366 aa15.44■□□□□ 0.06
MKS1-204ENST00000537529 APLFQ8IW19 511 aaPredicted RBP15.44■□□□□ 0.06
MKS1-204ENST00000537529 CLDN19Q8N6F1 224 aa15.44■□□□□ 0.06
MKS1-204ENST00000537529 GPR26Q8NDV2 337 aa15.44■□□□□ 0.06
MKS1-204ENST00000537529 OR52B6Q8NGF0 335 aa15.44■□□□□ 0.06
MKS1-204ENST00000537529 GATA6Q92908 595 aa15.44■□□□□ 0.06
MKS1-204ENST00000537529 BTBD9Q96Q07 612 aa15.44■□□□□ 0.06
MKS1-204ENST00000537529 MCCC1Q96RQ3 725 aaPredicted RBP15.44■□□□□ 0.06
MKS1-204ENST00000537529 GPATCH1Q9BRR8 931 aaKnown RBP15.44■□□□□ 0.06
MKS1-204ENST00000537529 ZDHHC3Q9NYG2 299 aa15.44■□□□□ 0.06
MKS1-204ENST00000537529 LZTS1Q9Y250 596 aa15.44■□□□□ 0.06
MKS1-204ENST00000537529 PTPRSQ13332 1948 aa15.44■□□□□ 0.06
MKS1-204ENST00000537529 SCN8AQ9UQD0 1980 aa15.44■□□□□ 0.06
MKS1-204ENST00000537529 A0A1W2PQ67 120 aa15.44■□□□□ 0.06
MKS1-204ENST00000537529 CSPG5O95196 566 aa15.44■□□□□ 0.06
MKS1-204ENST00000537529 OTCP00480 354 aa15.44■□□□□ 0.06
MKS1-204ENST00000537529 CHRM1P11229 460 aaPredicted RBP15.44■□□□□ 0.06
MKS1-204ENST00000537529 NSG1P42857 185 aa15.44■□□□□ 0.06
MKS1-204ENST00000537529 DIO3P55073 304 aa15.44■□□□□ 0.06
MKS1-204ENST00000537529 KCNK10P57789 538 aa15.44■□□□□ 0.06
MKS1-204ENST00000537529 ERVFC1P60507 584 aa15.44■□□□□ 0.06
MKS1-204ENST00000537529 DMC1Q14565 340 aa15.44■□□□□ 0.06
MKS1-204ENST00000537529 PDCD4Q53EL6 469 aaKnown RBP15.44■□□□□ 0.06
MKS1-204ENST00000537529 LETMD1Q6P1Q0 360 aa15.44■□□□□ 0.06
MKS1-204ENST00000537529 RTL10Q7L3V2 364 aa15.44■□□□□ 0.06
MKS1-204ENST00000537529 NECAB2Q7Z6G3 386 aa15.44■□□□□ 0.06
MKS1-204ENST00000537529 MINDY1Q8N5J2 469 aa15.44■□□□□ 0.06
MKS1-204ENST00000537529 MIEF2Q96C03 454 aa15.44■□□□□ 0.06
MKS1-204ENST00000537529 ARMC5Q96C12 935 aa15.44■□□□□ 0.06
MKS1-204ENST00000537529 ULK4Q96C45 1275 aa15.44■□□□□ 0.06
MKS1-204ENST00000537529 TCEAL4Q96EI5 215 aa15.44■□□□□ 0.06
MKS1-204ENST00000537529 ACOX2Q99424 681 aa15.44■□□□□ 0.06
MKS1-204ENST00000537529 BBS2Q9BXC9 721 aa15.44■□□□□ 0.06
MKS1-204ENST00000537529 BRINP2Q9C0B6 783 aa15.44■□□□□ 0.06
MKS1-204ENST00000537529 COPS7BQ9H9Q2 264 aaPredicted RBP15.44■□□□□ 0.06
MKS1-204ENST00000537529 TMEM45AQ9NWC5 275 aa15.44■□□□□ 0.06
MKS1-204ENST00000537529 PTBP2Q9UKA9 531 aaKnown RBP15.44■□□□□ 0.06
MKS1-204ENST00000537529 HELZP42694 1942 aaKnown RBP15.43■□□□□ 0.06
MKS1-204ENST00000537529 AGAP14A8MT82 685 aa15.43■□□□□ 0.06
MKS1-204ENST00000537529 HIDE1A8MVS5 230 aa15.43■□□□□ 0.06
MKS1-204ENST00000537529 FGBP02675 491 aa15.43■□□□□ 0.06
MKS1-204ENST00000537529 PTPN2P17706 415 aa15.43■□□□□ 0.06
MKS1-204ENST00000537529 VCLP18206 1134 aa15.43■□□□□ 0.06
MKS1-204ENST00000537529 ATP6AP1LQ52LC2 224 aa15.43■□□□□ 0.06
MKS1-204ENST00000537529 ASTLQ6HA08 431 aaPredicted RBP15.43■□□□□ 0.06
MKS1-204ENST00000537529 CAPRIN2Q6IMN6 1127 aaKnown RBP15.43■□□□□ 0.06
MKS1-204ENST00000537529 SCIMPQ6UWF3 145 aa15.43■□□□□ 0.06
MKS1-204ENST00000537529 MRPL43Q8N983 215 aaKnown RBP15.43■□□□□ 0.06
MKS1-204ENST00000537529 ADCY4Q8NFM4 1077 aa15.43■□□□□ 0.06
MKS1-204ENST00000537529 OR2T11Q8NH01 316 aa15.43■□□□□ 0.06
MKS1-204ENST00000537529 METTL6Q8TCB7 284 aa15.43■□□□□ 0.06
MKS1-204ENST00000537529 NAT14Q8WUY8 206 aa15.43■□□□□ 0.06
MKS1-204ENST00000537529 ATP6V1E2Q96A05 226 aa15.43■□□□□ 0.06
MKS1-204ENST00000537529 VOPP1Q96AW1 172 aa15.43■□□□□ 0.06
MKS1-204ENST00000537529 SPDL1Q96EA4 605 aa15.43■□□□□ 0.06
MKS1-204ENST00000537529 EGFL8Q99944 293 aa15.43■□□□□ 0.06
MKS1-204ENST00000537529 SLC39A3Q9BRY0 314 aa15.43■□□□□ 0.06
MKS1-204ENST00000537529 APOL5Q9BWW9 433 aa15.43■□□□□ 0.06
MKS1-204ENST00000537529 PCDHAC1Q9H158 963 aa15.43■□□□□ 0.06
MKS1-204ENST00000537529 KCTD5Q9NXV2 234 aa15.43■□□□□ 0.06
MKS1-204ENST00000537529 DLGAP2Q9P1A6 1054 aa15.43■□□□□ 0.06
MKS1-204ENST00000537529 PCDH10Q9P2E7 1040 aa15.43■□□□□ 0.06
MKS1-204ENST00000537529 MAP10Q9P2G4 905 aa15.43■□□□□ 0.06
MKS1-204ENST00000537529 KLHL42Q9P2K6 505 aa15.43■□□□□ 0.06
MKS1-204ENST00000537529 OR7A17O14581 309 aa15.42■□□□□ 0.06
MKS1-204ENST00000537529 UGT2B4P06133 528 aa15.42■□□□□ 0.06
MKS1-204ENST00000537529 CAPN1P07384 714 aa15.42■□□□□ 0.06
MKS1-204ENST00000537529 CBSLP0DN79 551 aa15.42■□□□□ 0.06
MKS1-204ENST00000537529 CTNNB1P35222 781 aa15.42■□□□□ 0.06
MKS1-204ENST00000537529 CBSP35520 551 aa15.42■□□□□ 0.06
MKS1-204ENST00000537529 RHDQ02161 417 aa15.42■□□□□ 0.06
MKS1-204ENST00000537529 PPIGQ13427 754 aaKnown RBP eCLIP15.42■□□□□ 0.062e-6■■■□□ 15.6
MKS1-204ENST00000537529 RCAN2Q14206 197 aa15.42■□□□□ 0.06
MKS1-204ENST00000537529 C18orf21Q32NC0 220 aaPredicted RBP15.42■□□□□ 0.06
MKS1-204ENST00000537529 SPATS1Q496A3 300 aa15.42■□□□□ 0.06
MKS1-204ENST00000537529 SULT1C3Q6IMI6 304 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms