RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 OR6K2Q8NGY2 324 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 PYDC1Q8WXC3 89 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 PPP2R3CQ969Q6 453 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 MAGEB10Q96LZ2 347 aaPredicted RBP13.4□□□□□ -0.26
SMG6-203ENST00000536871 C3orf30Q96M34 536 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 NSUN5Q96P11 429 aaKnown RBP13.4□□□□□ -0.26
SMG6-203ENST00000536871 COPS8Q99627 209 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 NPAS2Q99743 824 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 ECSITQ9BQ95 431 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 TRIM15Q9C019 465 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 MUC13Q9H3R2 512 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 ADA2Q9NZK5 511 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 ZIM2Q9NZV7 527 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 NFKBIL1Q9UBC1 381 aaPredicted RBP13.4□□□□□ -0.26
SMG6-203ENST00000536871 POLG2Q9UHN1 485 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 SLC4A7Q9Y6M7 1214 aa13.4□□□□□ -0.26
SMG6-203ENST00000536871 EME2A4GXA9 379 aaPredicted RBP13.39□□□□□ -0.27
SMG6-203ENST00000536871 C5orf67F2Z3F1 127 aa13.39□□□□□ -0.27
SMG6-203ENST00000536871 TLL1O43897 1013 aa13.39□□□□□ -0.27
SMG6-203ENST00000536871 RHOP08100 348 aa13.39□□□□□ -0.27
SMG6-203ENST00000536871 POLR2EP19388 210 aaKnown RBP13.39□□□□□ -0.27
SMG6-203ENST00000536871 DCDC1P59894 354 aa13.39□□□□□ -0.27
SMG6-203ENST00000536871 ERVFC1P60507 584 aa13.39□□□□□ -0.27
SMG6-203ENST00000536871 ERVK-8P63133 956 aa13.39□□□□□ -0.27
SMG6-203ENST00000536871 TEAD2Q15562 447 aa13.39□□□□□ -0.27
SMG6-203ENST00000536871 ZNF77Q15935 545 aa13.39□□□□□ -0.27
SMG6-203ENST00000536871 PLPP4Q5VZY2 271 aa13.39□□□□□ -0.27
SMG6-203ENST00000536871 TRIM68Q6AZZ1 485 aa13.39□□□□□ -0.27
SMG6-203ENST00000536871 C8orf82Q6P1X6 216 aaPredicted RBP13.39□□□□□ -0.27
SMG6-203ENST00000536871 SBSNQ6UWP8 590 aa13.39□□□□□ -0.27
SMG6-203ENST00000536871 GDPD4Q6W3E5 623 aa13.39□□□□□ -0.27
SMG6-203ENST00000536871 SYVN1Q86TM6 617 aa13.39□□□□□ -0.27
SMG6-203ENST00000536871 MINDY1Q8N5J2 469 aa13.39□□□□□ -0.27
SMG6-203ENST00000536871 HMGCLL1Q8TB92 370 aa13.39□□□□□ -0.27
SMG6-203ENST00000536871 PIP4K2CQ8TBX8 421 aa13.39□□□□□ -0.27
SMG6-203ENST00000536871 WFIKKN2Q8TEU8 576 aa13.39□□□□□ -0.27
SMG6-203ENST00000536871 SLC22A17Q8WUG5 538 aa13.39□□□□□ -0.27
SMG6-203ENST00000536871 PBXIP1Q96AQ6 731 aa13.39□□□□□ -0.27
SMG6-203ENST00000536871 TIFAQ96CG3 184 aa13.39□□□□□ -0.27
SMG6-203ENST00000536871 BTBD9Q96Q07 612 aa13.39□□□□□ -0.27
SMG6-203ENST00000536871 EFHD1Q9BUP0 239 aa13.39□□□□□ -0.27
SMG6-203ENST00000536871 BRINP2Q9C0B6 783 aa13.39□□□□□ -0.27
SMG6-203ENST00000536871 SMOXQ9NWM0 555 aa13.39□□□□□ -0.27
SMG6-203ENST00000536871 TMEM181Q9P2C4 612 aa13.39□□□□□ -0.27
SMG6-203ENST00000536871 PTBP2Q9UKA9 531 aaKnown RBP13.39□□□□□ -0.27
SMG6-203ENST00000536871 IKZF3Q9UKT9 509 aa13.39□□□□□ -0.27
SMG6-203ENST00000536871 CLEC4EQ9ULY5 219 aa13.39□□□□□ -0.27
SMG6-203ENST00000536871 IGLV3-16A0A075B6K0 115 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 C15orf38-AP3S2A0A0A6YYH1 394 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 ATP6AP2A0A1C7CYW4 349 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 CFAP99D6REC4 459 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 NEDD8-MDP1E9PL57 170 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 FBP2O00757 339 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 TRIM24O15164 1050 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 ATP6AP2O75787 350 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 WDR47O94967 919 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 ALDOCP09972 364 aaKnown RBP13.38□□□□□ -0.27
SMG6-203ENST00000536871 GJA1P17302 382 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 CLCN2P51788 898 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 HK3P52790 923 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 CDKL1Q00532 357 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 MAD2L1Q13257 205 aaPredicted RBP13.38□□□□□ -0.27
SMG6-203ENST00000536871 ARHGEF7Q14155 803 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 ATP6AP1LQ52LC2 224 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 LRRC66Q68CR7 880 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 IZUMO2Q6UXV1 221 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 ARPINQ7Z6K5 226 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 TMEM25Q86YD3 366 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 GALNT15Q8N3T1 639 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 ADCY4Q8NFM4 1077 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 SPPL3Q8TCT6 385 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 POF1BQ8WVV4 589 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 HERVK_113Q902F9 699 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 DUS3LQ96G46 650 aaKnown RBP13.38□□□□□ -0.27
SMG6-203ENST00000536871 LRGUKQ96M69 825 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 HEPHQ9BQS7 1158 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 TRIM54Q9BYV2 358 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 TUBB1Q9H4B7 451 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 AIG1Q9NVV5 245 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 SUN2Q9UH99 717 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 CENPFP49454 3210 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 DENND4CQ5VZ89 1909 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 TSPAN11A1L157 253 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 PABPN1LA6NDY0 278 aaKnown RBP13.38□□□□□ -0.27
SMG6-203ENST00000536871 NPIPB15A6NHN6 443 aaPredicted RBP13.38□□□□□ -0.27
SMG6-203ENST00000536871 NCF1BA6NI72 391 aaPredicted RBP13.38□□□□□ -0.27
SMG6-203ENST00000536871 NCF1CA8MVU1 366 aaPredicted RBP13.38□□□□□ -0.27
SMG6-203ENST00000536871 H3BNX3 289 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 ACOT8O14734 319 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 SLC16A5O15375 505 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 KATNA1O75449 491 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 AP2A2O94973 939 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 TRIM16O95361 564 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 SRPRAP08240 638 aaKnown RBP13.38□□□□□ -0.27
SMG6-203ENST00000536871 LINC00032P0C843 101 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 NCF1P14598 390 aaPredicted RBP13.38□□□□□ -0.27
SMG6-203ENST00000536871 TYRP14679 529 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 XRCC1P18887 633 aaPredicted RBP13.38□□□□□ -0.27
SMG6-203ENST00000536871 CCR2P41597 374 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 HSPA13P48723 471 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms