RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 SEMA3AQ14563 771 aa8.14□□□□□ -1.11
ABCA4-207ENST00000536513 C18orf21Q32NC0 220 aaPredicted RBP8.14□□□□□ -1.11
ABCA4-207ENST00000536513 PERM1Q5SV97 790 aa8.14□□□□□ -1.11
ABCA4-207ENST00000536513 C22orf39Q6P5X5 142 aa8.14□□□□□ -1.11
ABCA4-207ENST00000536513 PARM1Q6UWI2 310 aa8.14□□□□□ -1.11
ABCA4-207ENST00000536513 MBOAT1Q6ZNC8 495 aa8.14□□□□□ -1.11
ABCA4-207ENST00000536513 SERPINA9Q86WD7 417 aa8.14□□□□□ -1.11
ABCA4-207ENST00000536513 ZNF781Q8N8C0 355 aa8.14□□□□□ -1.11
ABCA4-207ENST00000536513 PTGR2Q8N8N7 351 aaPredicted RBP8.14□□□□□ -1.11
ABCA4-207ENST00000536513 ENDOVQ8N8Q3 282 aaKnown RBP8.14□□□□□ -1.11
ABCA4-207ENST00000536513 CATSPER1Q8NEC5 780 aa8.14□□□□□ -1.11
ABCA4-207ENST00000536513 HERVK_113Q902F9 699 aa8.14□□□□□ -1.11
ABCA4-207ENST00000536513 NXPE3Q969Y0 559 aa8.14□□□□□ -1.11
ABCA4-207ENST00000536513 MIPEPQ99797 713 aa8.14□□□□□ -1.11
ABCA4-207ENST00000536513 ATG10Q9H0Y0 220 aa8.14□□□□□ -1.11
ABCA4-207ENST00000536513 ZNF576Q9H609 170 aa8.14□□□□□ -1.11
ABCA4-207ENST00000536513 RETREG1Q9H6L5 497 aa8.14□□□□□ -1.11
ABCA4-207ENST00000536513 FZD3Q9NPG1 666 aa8.14□□□□□ -1.11
ABCA4-207ENST00000536513 THG1LQ9NWX6 298 aaKnown RBP8.14□□□□□ -1.11
ABCA4-207ENST00000536513 DCDC2Q9UHG0 476 aa8.14□□□□□ -1.11
ABCA4-207ENST00000536513 N6AMT1Q9Y5N5 214 aa8.14□□□□□ -1.11
ABCA4-207ENST00000536513 AP4B1Q9Y6B7 739 aa8.14□□□□□ -1.11
ABCA4-207ENST00000536513 IFRD1O00458 451 aaPredicted RBP8.14□□□□□ -1.11
ABCA4-207ENST00000536513 VPS26AO75436 327 aa8.14□□□□□ -1.11
ABCA4-207ENST00000536513 ADH1CP00326 375 aa8.14□□□□□ -1.11
ABCA4-207ENST00000536513 SERPIND1P05546 499 aa8.14□□□□□ -1.11
ABCA4-207ENST00000536513 RPL10P27635 214 aaKnown RBP8.14□□□□□ -1.11
ABCA4-207ENST00000536513 GGT5P36269 586 aa8.14□□□□□ -1.11
ABCA4-207ENST00000536513 MRPS15P82914 257 aaKnown RBP8.14□□□□□ -1.11
ABCA4-207ENST00000536513 IL1RL1Q01638 556 aa8.14□□□□□ -1.11
ABCA4-207ENST00000536513 LSAMPQ13449 338 aa8.14□□□□□ -1.11
ABCA4-207ENST00000536513 MAPK11Q15759 364 aa8.14□□□□□ -1.11
ABCA4-207ENST00000536513 NADK2Q4G0N4 442 aa8.14□□□□□ -1.11
ABCA4-207ENST00000536513 KDELC1Q6UW63 502 aa8.14□□□□□ -1.11
ABCA4-207ENST00000536513 TRMT11Q7Z4G4 463 aaKnown RBP8.14□□□□□ -1.11
ABCA4-207ENST00000536513 TMEM135Q86UB9 458 aa8.14□□□□□ -1.11
ABCA4-207ENST00000536513 NPAS3Q8IXF0 933 aa8.14□□□□□ -1.11
ABCA4-207ENST00000536513 SVIPQ8NHG7 77 aa8.14□□□□□ -1.11
ABCA4-207ENST00000536513 ZNF398Q8TD17 642 aa8.14□□□□□ -1.11
ABCA4-207ENST00000536513 NRG4Q8WWG1 115 aa8.14□□□□□ -1.11
ABCA4-207ENST00000536513 MED8Q96G25 268 aa8.14□□□□□ -1.11
ABCA4-207ENST00000536513 ZFRQ96KR1 1074 aaKnown RBP8.14□□□□□ -1.11
ABCA4-207ENST00000536513 TDRD1Q9BXT4 1180 aaKnown RBP8.14□□□□□ -1.11
ABCA4-207ENST00000536513 C20orf27Q9GZN8 174 aa8.14□□□□□ -1.11
ABCA4-207ENST00000536513 SUV39H2Q9H5I1 410 aa8.14□□□□□ -1.11
ABCA4-207ENST00000536513 PTTG2Q9NZH5 202 aa8.14□□□□□ -1.11
ABCA4-207ENST00000536513 SLC7A8Q9UHI5 535 aa8.14□□□□□ -1.11
ABCA4-207ENST00000536513 PTGDR2Q9Y5Y4 395 aa8.14□□□□□ -1.11
ABCA4-207ENST00000536513 BDP1A6H8Y1 2624 aa8.13□□□□□ -1.11
ABCA4-207ENST00000536513 DRGXA6NNA5 263 aa8.13□□□□□ -1.11
ABCA4-207ENST00000536513 TRIM13O60858 407 aa8.13□□□□□ -1.11
ABCA4-207ENST00000536513 RPP40O75818 363 aaKnown RBP8.13□□□□□ -1.11
ABCA4-207ENST00000536513 MMP2P08253 660 aa8.13□□□□□ -1.11
ABCA4-207ENST00000536513 PRKCHP24723 683 aa8.13□□□□□ -1.11
ABCA4-207ENST00000536513 SIM2Q14190 667 aaPredicted RBP8.13□□□□□ -1.11
ABCA4-207ENST00000536513 STARD3Q14849 445 aa8.13□□□□□ -1.11
ABCA4-207ENST00000536513 SPDYAQ5MJ70 313 aa8.13□□□□□ -1.11
ABCA4-207ENST00000536513 PRAMEF14Q5SWL7 426 aa8.13□□□□□ -1.11
ABCA4-207ENST00000536513 AGAP9Q5VTM2 703 aa8.13□□□□□ -1.11
ABCA4-207ENST00000536513 LRRC8EQ6NSJ5 796 aa8.13□□□□□ -1.11
ABCA4-207ENST00000536513 NCCRP1Q6ZVX7 275 aaPredicted RBP8.13□□□□□ -1.11
ABCA4-207ENST00000536513 IFNEQ86WN2 208 aa8.13□□□□□ -1.11
ABCA4-207ENST00000536513 HPS6Q86YV9 775 aa8.13□□□□□ -1.11
ABCA4-207ENST00000536513 OR13J1Q8NGT2 312 aa8.13□□□□□ -1.11
ABCA4-207ENST00000536513 OR14C36Q8NHC7 312 aa8.13□□□□□ -1.11
ABCA4-207ENST00000536513 CSGALNACT1Q8TDX6 532 aa8.13□□□□□ -1.11
ABCA4-207ENST00000536513 FGF14Q92915 247 aa8.13□□□□□ -1.11
ABCA4-207ENST00000536513 RSPRY1Q96DX4 576 aa8.13□□□□□ -1.11
ABCA4-207ENST00000536513 MYRFLQ96LU7 910 aa8.13□□□□□ -1.11
ABCA4-207ENST00000536513 TAS2R13Q9NYV9 303 aa8.13□□□□□ -1.11
ABCA4-207ENST00000536513 AHCTF1Q8WYP5 2266 aa8.13□□□□□ -1.11
ABCA4-207ENST00000536513 TBC1D3DA0A087WVF3 549 aa8.13□□□□□ -1.11
ABCA4-207ENST00000536513 TBC1D3IA0A087WXS9 549 aa8.13□□□□□ -1.11
ABCA4-207ENST00000536513 TBC1D3EA0A087X179 549 aa8.13□□□□□ -1.11
ABCA4-207ENST00000536513 TBC1D3KA0A087X1G2 549 aa8.13□□□□□ -1.11
ABCA4-207ENST00000536513 GLYATL1P3A0A0U1RQE8 302 aa8.13□□□□□ -1.11
ABCA4-207ENST00000536513 TBC1D3FA6NER0 549 aaPredicted RBP8.13□□□□□ -1.11
ABCA4-207ENST00000536513 TBC1D3LB9A6J9 549 aa8.13□□□□□ -1.11
ABCA4-207ENST00000536513 TYROBPO43914 113 aa8.13□□□□□ -1.11
ABCA4-207ENST00000536513 PLIN3O60664 434 aa8.13□□□□□ -1.11
ABCA4-207ENST00000536513 PAK4O96013 591 aaPredicted RBP8.13□□□□□ -1.11
ABCA4-207ENST00000536513 TBC1D3HP0C7X1 549 aa8.13□□□□□ -1.11
ABCA4-207ENST00000536513 KRT33BQ14525 404 aa8.13□□□□□ -1.11
ABCA4-207ENST00000536513 NEDD8Q15843 81 aa8.13□□□□□ -1.11
ABCA4-207ENST00000536513 AAK1Q2M2I8 961 aa8.13□□□□□ -1.11
ABCA4-207ENST00000536513 MYLK3Q32MK0 819 aa8.13□□□□□ -1.11
ABCA4-207ENST00000536513 SYTL3Q4VX76 610 aa8.13□□□□□ -1.11
ABCA4-207ENST00000536513 SETMARQ53H47 684 aaPredicted RBP8.13□□□□□ -1.11
ABCA4-207ENST00000536513 ARL13AQ5H913 290 aaPredicted RBP8.13□□□□□ -1.11
ABCA4-207ENST00000536513 C6orf52Q5T4I8 152 aa8.13□□□□□ -1.11
ABCA4-207ENST00000536513 TBC1D3GQ6DHY5 549 aa8.13□□□□□ -1.11
ABCA4-207ENST00000536513 TBC1D3CQ6IPX1 549 aa8.13□□□□□ -1.11
ABCA4-207ENST00000536513 LILRA6Q6PI73 481 aa8.13□□□□□ -1.11
ABCA4-207ENST00000536513 USP45Q70EL2 814 aa8.13□□□□□ -1.11
ABCA4-207ENST00000536513 RAB44Q7Z6P3 723 aaPredicted RBP8.13□□□□□ -1.11
ABCA4-207ENST00000536513 TMC8Q8IU68 726 aa8.13□□□□□ -1.11
ABCA4-207ENST00000536513 RELL1Q8IUW5 271 aa8.13□□□□□ -1.11
ABCA4-207ENST00000536513 TBC1D3Q8IZP1 549 aaPredicted RBP8.13□□□□□ -1.11
ABCA4-207ENST00000536513 TSPAN14Q8NG11 270 aa8.13□□□□□ -1.11
ABCA4-207ENST00000536513 EEF1AKMT1Q8WVE0 214 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms