RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 UBTD2Q8WUN7 234 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 SORCS1Q8WY21 1168 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 JADE3Q92613 823 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 MRPL38Q96DV4 380 aaKnown RBP13.2□□□□□ -0.3
BEST1-208ENST00000534553 ANKRD27Q96NW4 1050 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 SLC28A3Q9HAS3 691 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 TMEM45AQ9NWC5 275 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 UTP6Q9NYH9 597 aaKnown RBP13.2□□□□□ -0.3
BEST1-208ENST00000534553 CDH7Q9ULB5 785 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 PABPN1LA6NDY0 278 aaKnown RBP13.2□□□□□ -0.3
BEST1-208ENST00000534553 NCF1BA6NI72 391 aaPredicted RBP13.2□□□□□ -0.3
BEST1-208ENST00000534553 NCF1CA8MVU1 366 aaPredicted RBP13.2□□□□□ -0.3
BEST1-208ENST00000534553 NUAK1O60285 661 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 OTCP00480 354 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 FTH1P02794 183 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 C8GP07360 202 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 CTSLP07711 333 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 MPC1LP0DKB6 136 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 NCF1P14598 390 aaPredicted RBP13.2□□□□□ -0.3
BEST1-208ENST00000534553 ITGAXP20702 1163 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 ITGB7P26010 798 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 ACTR3P61158 418 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 SLC25A3Q00325 362 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 CDKL1Q00532 357 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 GRIK2Q13002 908 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 SP140Q13342 867 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 GSTA3Q16772 222 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 FNDC3BQ53EP0 1204 aaKnown RBP13.2□□□□□ -0.3
BEST1-208ENST00000534553 RARS2Q5T160 578 aaKnown RBP13.2□□□□□ -0.3
BEST1-208ENST00000534553 HENMT1Q5T8I9 393 aaKnown RBP13.2□□□□□ -0.3
BEST1-208ENST00000534553 TMEM198Q66K66 360 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 OGFOD2Q6N063 350 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 NEK10Q6ZWH5 1172 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 RPS27LQ71UM5 84 aaKnown RBP13.2□□□□□ -0.3
BEST1-208ENST00000534553 C12orf40Q86WS4 652 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 TCAIMQ8N3R3 496 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 TERB1Q8NA31 727 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 FBXO27Q8NI29 283 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 TRIM54Q9BYV2 358 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 EBF3Q9H4W6 596 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 TNFRSF12AQ9NP84 129 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 SEMA4BQ9NPR2 832 aaPredicted RBP13.2□□□□□ -0.3
BEST1-208ENST00000534553 MRPL40Q9NQ50 206 aaKnown RBP13.2□□□□□ -0.3
BEST1-208ENST00000534553 RIC8BQ9NVN3 520 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 SLC7A8Q9UHI5 535 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 BCAP29Q9UHQ4 241 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 PTBP2Q9UKA9 531 aaKnown RBP13.2□□□□□ -0.3
BEST1-208ENST00000534553 A0A088AWK7 358 aa13.19□□□□□ -0.3
BEST1-208ENST00000534553 BBIP1A8MTZ0 92 aa13.19□□□□□ -0.3
BEST1-208ENST00000534553 MEI4A8MW99 385 aa13.19□□□□□ -0.3
BEST1-208ENST00000534553 PSMD12O00232 456 aaPredicted RBP13.19□□□□□ -0.3
BEST1-208ENST00000534553 PIP5K1BO14986 540 aa13.19□□□□□ -0.3
BEST1-208ENST00000534553 SLC16A5O15375 505 aa13.19□□□□□ -0.3
BEST1-208ENST00000534553 ELFN1P0C7U0 828 aa13.19□□□□□ -0.3
BEST1-208ENST00000534553 ARSAP15289 507 aa13.19□□□□□ -0.3
BEST1-208ENST00000534553 LBPP18428 481 aa13.19□□□□□ -0.3
BEST1-208ENST00000534553 AKT1P31749 480 aa13.19□□□□□ -0.3
BEST1-208ENST00000534553 MRPL19P49406 292 aaKnown RBP13.19□□□□□ -0.3
BEST1-208ENST00000534553 NUDT2P50583 147 aa13.19□□□□□ -0.3
BEST1-208ENST00000534553 GBX1Q14549 363 aa13.19□□□□□ -0.3
BEST1-208ENST00000534553 KPNB1Q14974 876 aaKnown RBP13.19□□□□□ -0.3
BEST1-208ENST00000534553 RBBP7Q16576 425 aa13.19□□□□□ -0.3
BEST1-208ENST00000534553 ACSBG2Q5FVE4 666 aa13.19□□□□□ -0.3
BEST1-208ENST00000534553 PGM2L1Q6PCE3 622 aa13.19□□□□□ -0.3
BEST1-208ENST00000534553 RNF165Q6ZSG1 346 aa13.19□□□□□ -0.3
BEST1-208ENST00000534553 CYP2U1Q7Z449 544 aa13.19□□□□□ -0.3
BEST1-208ENST00000534553 SPATA19Q7Z5L4 167 aa13.19□□□□□ -0.3
BEST1-208ENST00000534553 YAF2Q8IY57 180 aa13.19□□□□□ -0.3
BEST1-208ENST00000534553 DEFB107AQ8IZN7 70 aa13.19□□□□□ -0.3
BEST1-208ENST00000534553 PGAM4Q8N0Y7 254 aa13.19□□□□□ -0.3
BEST1-208ENST00000534553 GDPD5Q8WTR4 605 aa13.19□□□□□ -0.3
BEST1-208ENST00000534553 NSUN5Q96P11 429 aaKnown RBP13.19□□□□□ -0.3
BEST1-208ENST00000534553 SLC25A23Q9BV35 468 aa13.19□□□□□ -0.3
BEST1-208ENST00000534553 MRPL1Q9BYD6 325 aaKnown RBP13.19□□□□□ -0.3
BEST1-208ENST00000534553 NKX2-4Q9H2Z4 354 aa13.19□□□□□ -0.3
BEST1-208ENST00000534553 CERS4Q9HA82 394 aa13.19□□□□□ -0.3
BEST1-208ENST00000534553 STOML1Q9UBI4 398 aa13.19□□□□□ -0.3
BEST1-208ENST00000534553 CDH22Q9UJ99 828 aa13.19□□□□□ -0.3
BEST1-208ENST00000534553 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.19□□□□□ -0.3
BEST1-208ENST00000534553 MYOFQ9NZM1 2061 aa13.19□□□□□ -0.3
BEST1-208ENST00000534553 FKBP6O75344 327 aa13.18□□□□□ -0.3
BEST1-208ENST00000534553 ENTPD5O75356 428 aa13.18□□□□□ -0.3
BEST1-208ENST00000534553 ANXA5P08758 320 aa13.18□□□□□ -0.3
BEST1-208ENST00000534553 IDO1P14902 403 aa13.18□□□□□ -0.3
BEST1-208ENST00000534553 TSPAN8P19075 237 aa13.18□□□□□ -0.3
BEST1-208ENST00000534553 MSH3P20585 1137 aa13.18□□□□□ -0.3
BEST1-208ENST00000534553 FCARP24071 287 aa13.18□□□□□ -0.3
BEST1-208ENST00000534553 AOAHP28039 575 aa13.18□□□□□ -0.3
BEST1-208ENST00000534553 CA5AP35218 305 aa13.18□□□□□ -0.3
BEST1-208ENST00000534553 PBX2P40425 430 aa13.18□□□□□ -0.3
BEST1-208ENST00000534553 B4GALNT1Q00973 533 aa13.18□□□□□ -0.3
BEST1-208ENST00000534553 TBL3Q12788 808 aaKnown RBP13.18□□□□□ -0.3
BEST1-208ENST00000534553 ART3Q13508 389 aa13.18□□□□□ -0.3
BEST1-208ENST00000534553 PTK2BQ14289 1009 aa13.18□□□□□ -0.3
BEST1-208ENST00000534553 FASTKQ14296 549 aaKnown RBP13.18□□□□□ -0.3
BEST1-208ENST00000534553 C1orf146Q5VVC0 180 aa13.18□□□□□ -0.3
BEST1-208ENST00000534553 CYHR1Q6ZMK1 362 aa13.18□□□□□ -0.3
BEST1-208ENST00000534553 ZNF765Q7L2R6 523 aa13.18□□□□□ -0.3
BEST1-208ENST00000534553 HSD11B1LQ7Z5J1 315 aa13.18□□□□□ -0.3
BEST1-208ENST00000534553 TECPR1Q7Z6L1 1165 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms