RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 PEX13Q92968 403 aa13.78□□□□□ -0.2
VPS11-205ENST00000534551 ERP44Q9BS26 406 aa13.78□□□□□ -0.2
VPS11-205ENST00000534551 ANAPC5Q9UJX4 755 aa13.78□□□□□ -0.2
VPS11-205ENST00000534551 PSMD13Q9UNM6 376 aa13.78□□□□□ -0.2
VPS11-205ENST00000534551 WASF3Q9UPY6 502 aa13.78□□□□□ -0.2
VPS11-205ENST00000534551 FAM237BA0A1B0GVD1 139 aa13.77□□□□□ -0.21
VPS11-205ENST00000534551 IQCF5A8MTL0 148 aa13.77□□□□□ -0.21
VPS11-205ENST00000534551 CFAP99D6REC4 459 aa13.77□□□□□ -0.21
VPS11-205ENST00000534551 CD3EAPO15446 510 aaKnown RBP13.77□□□□□ -0.21
VPS11-205ENST00000534551 RALBP11234 206 aa13.77□□□□□ -0.21
VPS11-205ENST00000534551 F3P13726 295 aa13.77□□□□□ -0.21
VPS11-205ENST00000534551 ITIH4Q14624 930 aa13.77□□□□□ -0.21
VPS11-205ENST00000534551 CRYMQ14894 314 aa13.77□□□□□ -0.21
VPS11-205ENST00000534551 HIF1AQ16665 826 aa13.77□□□□□ -0.21
VPS11-205ENST00000534551 ZNF470Q6ECI4 717 aa13.77□□□□□ -0.21
VPS11-205ENST00000534551 ZDHHC24Q6UX98 284 aa13.77□□□□□ -0.21
VPS11-205ENST00000534551 PACS1Q6VY07 963 aa13.77□□□□□ -0.21
VPS11-205ENST00000534551 AMZ2Q86W34 360 aa13.77□□□□□ -0.21
VPS11-205ENST00000534551 C17orf82Q86X59 251 aaPredicted RBP13.77□□□□□ -0.21
VPS11-205ENST00000534551 KRT222Q8N1A0 295 aa13.77□□□□□ -0.21
VPS11-205ENST00000534551 Q8N9G6 341 aaPredicted RBP13.77□□□□□ -0.21
VPS11-205ENST00000534551 SPDYE1Q8NFV5 336 aaPredicted RBP13.77□□□□□ -0.21
VPS11-205ENST00000534551 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.77□□□□□ -0.21
VPS11-205ENST00000534551 RMDN2Q96LZ7 410 aa13.77□□□□□ -0.21
VPS11-205ENST00000534551 PCDHGA1Q9Y5H4 931 aa13.77□□□□□ -0.21
VPS11-205ENST00000534551 CFAP20Q9Y6A4 193 aaKnown RBP13.77□□□□□ -0.21
VPS11-205ENST00000534551 PPM1DO15297 605 aa13.76□□□□□ -0.21
VPS11-205ENST00000534551 USP1O94782 785 aa13.76□□□□□ -0.21
VPS11-205ENST00000534551 PGAM1P18669 254 aa13.76□□□□□ -0.21
VPS11-205ENST00000534551 ELK3P41970 407 aa13.76□□□□□ -0.21
VPS11-205ENST00000534551 PREPP48147 710 aa13.76□□□□□ -0.21
VPS11-205ENST00000534551 RPIAP49247 311 aa13.76□□□□□ -0.21
VPS11-205ENST00000534551 CCL7P80098 99 aa13.76□□□□□ -0.21
VPS11-205ENST00000534551 MPP1Q00013 466 aa13.76□□□□□ -0.21
VPS11-205ENST00000534551 DMPKQ09013 629 aa13.76□□□□□ -0.21
VPS11-205ENST00000534551 CLCA4Q14CN2 919 aa13.76□□□□□ -0.21
VPS11-205ENST00000534551 ZNF658BQ4V348 819 aaPredicted RBP13.76□□□□□ -0.21
VPS11-205ENST00000534551 DNAJC21Q5F1R6 531 aaKnown RBP13.76□□□□□ -0.21
VPS11-205ENST00000534551 ZNF789Q5FWF6 425 aa13.76□□□□□ -0.21
VPS11-205ENST00000534551 ERMP1Q7Z2K6 904 aa13.76□□□□□ -0.21
VPS11-205ENST00000534551 MAATS1Q7Z4T9 603 aa13.76□□□□□ -0.21
VPS11-205ENST00000534551 SPRED1Q7Z699 444 aa13.76□□□□□ -0.21
VPS11-205ENST00000534551 TMEM135Q86UB9 458 aa13.76□□□□□ -0.21
VPS11-205ENST00000534551 DENND6AQ8IWF6 608 aa13.76□□□□□ -0.21
VPS11-205ENST00000534551 SFRP1Q8N474 314 aa13.76□□□□□ -0.21
VPS11-205ENST00000534551 MAPK15Q8TD08 544 aa13.76□□□□□ -0.21
VPS11-205ENST00000534551 JPH3Q8WXH2 748 aaPredicted RBP13.76□□□□□ -0.21
VPS11-205ENST00000534551 GLMNQ92990 594 aa13.76□□□□□ -0.21
VPS11-205ENST00000534551 NAT6Q93015 286 aa13.76□□□□□ -0.21
VPS11-205ENST00000534551 FAM136AQ96C01 138 aa13.76□□□□□ -0.21
VPS11-205ENST00000534551 CARD6Q9BX69 1037 aa13.76□□□□□ -0.21
VPS11-205ENST00000534551 WWP1Q9H0M0 922 aa13.76□□□□□ -0.21
VPS11-205ENST00000534551 COG4Q9H9E3 785 aa13.76□□□□□ -0.21
VPS11-205ENST00000534551 ZNF624Q9P2J8 865 aaPredicted RBP13.76□□□□□ -0.21
VPS11-205ENST00000534551 LRIT1Q9P2V4 623 aa13.76□□□□□ -0.21
VPS11-205ENST00000534551 ATXN7L1Q9ULK2 861 aaPredicted RBP13.76□□□□□ -0.21
VPS11-205ENST00000534551 SNRNP200O75643 2136 aaKnown RBP13.75□□□□□ -0.21
VPS11-205ENST00000534551 A0A1W2PQM1 296 aa13.75□□□□□ -0.21
VPS11-205ENST00000534551 UBA6A0AVT1 1052 aaPredicted RBP13.75□□□□□ -0.21
VPS11-205ENST00000534551 CTAGE15A4D2H0 777 aa13.75□□□□□ -0.21
VPS11-205ENST00000534551 MGAT4DA6NG13 374 aa13.75□□□□□ -0.21
VPS11-205ENST00000534551 AGRPO00253 132 aa13.75□□□□□ -0.21
VPS11-205ENST00000534551 OPA1O60313 960 aa13.75□□□□□ -0.21
VPS11-205ENST00000534551 RPLP0P05388 317 aaKnown RBP13.75□□□□□ -0.21
VPS11-205ENST00000534551 POLBP06746 335 aa13.75□□□□□ -0.21
VPS11-205ENST00000534551 CTAGE8P0CG41 777 aa13.75□□□□□ -0.21
VPS11-205ENST00000534551 ERVK-10P10266 1014 aa13.75□□□□□ -0.21
VPS11-205ENST00000534551 GLB1P16278 677 aa13.75□□□□□ -0.21
VPS11-205ENST00000534551 CSF2RBP32927 897 aa13.75□□□□□ -0.21
VPS11-205ENST00000534551 NSG1P42857 185 aa13.75□□□□□ -0.21
VPS11-205ENST00000534551 SLC1A2P43004 574 aa13.75□□□□□ -0.21
VPS11-205ENST00000534551 ABCG1P45844 678 aa13.75□□□□□ -0.21
VPS11-205ENST00000534551 DUSP3P51452 185 aaPredicted RBP13.75□□□□□ -0.21
VPS11-205ENST00000534551 CLCNKAP51800 687 aa13.75□□□□□ -0.21
VPS11-205ENST00000534551 PDX1P52945 283 aa13.75□□□□□ -0.21
VPS11-205ENST00000534551 CSE1LP55060 971 aaKnown RBP13.75□□□□□ -0.21
VPS11-205ENST00000534551 EIF3BP55884 814 aaKnown RBP13.75□□□□□ -0.21
VPS11-205ENST00000534551 ARL4CP56559 192 aa13.75□□□□□ -0.21
VPS11-205ENST00000534551 OR1D5P58170 312 aa13.75□□□□□ -0.21
VPS11-205ENST00000534551 UBE2IP63279 158 aaKnown RBP13.75□□□□□ -0.21
VPS11-205ENST00000534551 HHEXQ03014 270 aa13.75□□□□□ -0.21
VPS11-205ENST00000534551 PDIA2Q13087 525 aaKnown RBP13.75□□□□□ -0.21
VPS11-205ENST00000534551 BOP1Q14137 746 aaKnown RBP13.75□□□□□ -0.21
VPS11-205ENST00000534551 BRD3Q15059 726 aa13.75□□□□□ -0.21
VPS11-205ENST00000534551 TYSND1Q2T9J0 566 aa13.75□□□□□ -0.21
VPS11-205ENST00000534551 CTSL3PQ5NE16 218 aa13.75□□□□□ -0.21
VPS11-205ENST00000534551 NKAIN2Q5VXU1 208 aa13.75□□□□□ -0.21
VPS11-205ENST00000534551 TRMT10BQ6PF06 316 aaKnown RBP13.75□□□□□ -0.21
VPS11-205ENST00000534551 IYDQ6PHW0 289 aa13.75□□□□□ -0.21
VPS11-205ENST00000534551 UNC5AQ6ZN44 842 aa13.75□□□□□ -0.21
VPS11-205ENST00000534551 CAPN12Q6ZSI9 719 aa13.75□□□□□ -0.21
VPS11-205ENST00000534551 CENPUQ71F23 418 aa13.75□□□□□ -0.21
VPS11-205ENST00000534551 TMPRSS9Q7Z410 1059 aa13.75□□□□□ -0.21
VPS11-205ENST00000534551 ZNF438Q7Z4V0 828 aa13.75□□□□□ -0.21
VPS11-205ENST00000534551 CTAGE6Q86UF2 777 aa13.75□□□□□ -0.21
VPS11-205ENST00000534551 CCNJLQ8IV13 435 aa13.75□□□□□ -0.21
VPS11-205ENST00000534551 CTAGE4Q8IX94 777 aa13.75□□□□□ -0.21
VPS11-205ENST00000534551 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.75□□□□□ -0.21
VPS11-205ENST00000534551 OR2L2Q8NH16 312 aa13.75□□□□□ -0.21
VPS11-205ENST00000534551 HM13Q8TCT9 377 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms