RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 ATP1A2P50993 1020 aa10.25□□□□□ -0.77
CAPN1-225ENST00000533704 LY6DQ14210 128 aa10.25□□□□□ -0.77
CAPN1-225ENST00000533704 GPR18Q14330 331 aa10.25□□□□□ -0.77
CAPN1-225ENST00000533704 NFE2L1Q14494 772 aa10.25□□□□□ -0.77
CAPN1-225ENST00000533704 CLCA4Q14CN2 919 aa10.25□□□□□ -0.77
CAPN1-225ENST00000533704 LONRF2Q1L5Z9 754 aa10.25□□□□□ -0.77
CAPN1-225ENST00000533704 DCAF12Q5T6F0 453 aa10.25□□□□□ -0.77
CAPN1-225ENST00000533704 SEL1L2Q5TEA6 688 aa10.25□□□□□ -0.77
CAPN1-225ENST00000533704 ABRAXAS1Q6UWZ7 409 aa10.25□□□□□ -0.77
CAPN1-225ENST00000533704 FAM83HQ6ZRV2 1179 aaPredicted RBP10.25□□□□□ -0.77
CAPN1-225ENST00000533704 C11orf96Q7Z7L8 435 aa10.25□□□□□ -0.77
CAPN1-225ENST00000533704 PLXDC1Q8IUK5 500 aa10.25□□□□□ -0.77
CAPN1-225ENST00000533704 IL22RA1Q8N6P7 574 aa10.25□□□□□ -0.77
CAPN1-225ENST00000533704 ATG4AQ8WYN0 398 aa10.25□□□□□ -0.77
CAPN1-225ENST00000533704 SGF29Q96ES7 293 aa10.25□□□□□ -0.77
CAPN1-225ENST00000533704 DCUN1D1Q96GG9 259 aa10.25□□□□□ -0.77
CAPN1-225ENST00000533704 PPP1R2P1Q96PQ5 205 aa10.25□□□□□ -0.77
CAPN1-225ENST00000533704 TMEM121Q9BTD3 319 aa10.25□□□□□ -0.77
CAPN1-225ENST00000533704 ASPSCR1Q9BZE9 553 aa10.25□□□□□ -0.77
CAPN1-225ENST00000533704 EPB41L1Q9H4G0 881 aa10.25□□□□□ -0.77
CAPN1-225ENST00000533704 POT1Q9NUX5 634 aa10.25□□□□□ -0.77
CAPN1-225ENST00000533704 PIH1D1Q9NWS0 290 aaKnown RBP10.25□□□□□ -0.77
CAPN1-225ENST00000533704 SSUH2Q9Y2M2 353 aa10.25□□□□□ -0.77
CAPN1-225ENST00000533704 CCDC78A2IDD5 438 aa10.24□□□□□ -0.77
CAPN1-225ENST00000533704 B4E171 279 aa10.24□□□□□ -0.77
CAPN1-225ENST00000533704 CAPN5O15484 640 aaPredicted RBP10.24□□□□□ -0.77
CAPN1-225ENST00000533704 ZNF189O75820 626 aaPredicted RBP10.24□□□□□ -0.77
CAPN1-225ENST00000533704 METTL18O95568 372 aa10.24□□□□□ -0.77
CAPN1-225ENST00000533704 POLBP06746 335 aa10.24□□□□□ -0.77
CAPN1-225ENST00000533704 ITGALP20701 1170 aa10.24□□□□□ -0.77
CAPN1-225ENST00000533704 TSPAN7P41732 249 aa10.24□□□□□ -0.77
CAPN1-225ENST00000533704 LEPRP48357 1165 aaKnown RBP10.24□□□□□ -0.77
CAPN1-225ENST00000533704 ARSDP51689 593 aa10.24□□□□□ -0.77
CAPN1-225ENST00000533704 GDF10P55107 478 aa10.24□□□□□ -0.77
CAPN1-225ENST00000533704 RAB15P59190 212 aa10.24□□□□□ -0.77
CAPN1-225ENST00000533704 PDE1BQ01064 536 aa10.24□□□□□ -0.77
CAPN1-225ENST00000533704 FOXM1Q08050 763 aa10.24□□□□□ -0.77
CAPN1-225ENST00000533704 C19orf57Q0VDD7 668 aa10.24□□□□□ -0.77
CAPN1-225ENST00000533704 PLCL1Q15111 1095 aa10.24□□□□□ -0.77
CAPN1-225ENST00000533704 PARP6Q2NL67 630 aa10.24□□□□□ -0.77
CAPN1-225ENST00000533704 AGAP9Q5VTM2 703 aa10.24□□□□□ -0.77
CAPN1-225ENST00000533704 IRGCQ6NXR0 463 aa10.24□□□□□ -0.77
CAPN1-225ENST00000533704 PCSK4Q6UW60 755 aa10.24□□□□□ -0.77
CAPN1-225ENST00000533704 CEACAM20Q6UY09 585 aa10.24□□□□□ -0.77
CAPN1-225ENST00000533704 WASH2PQ6VEQ5 465 aa10.24□□□□□ -0.77
CAPN1-225ENST00000533704 FAM92BQ6ZTR7 304 aa10.24□□□□□ -0.77
CAPN1-225ENST00000533704 MICALCLQ6ZW33 695 aa10.24□□□□□ -0.77
CAPN1-225ENST00000533704 ARHGAP22Q7Z5H3 698 aa10.24□□□□□ -0.77
CAPN1-225ENST00000533704 ZSCAN1Q8NBB4 408 aa10.24□□□□□ -0.77
CAPN1-225ENST00000533704 GPR150Q8NGU9 434 aa10.24□□□□□ -0.77
CAPN1-225ENST00000533704 DTX3LQ8TDB6 740 aa10.24□□□□□ -0.77
CAPN1-225ENST00000533704 RSC1A1Q92681 617 aa10.24□□□□□ -0.77
CAPN1-225ENST00000533704 HES6Q96HZ4 224 aa10.24□□□□□ -0.77
CAPN1-225ENST00000533704 DDA1Q9BW61 102 aa10.24□□□□□ -0.77
CAPN1-225ENST00000533704 WWP1Q9H0M0 922 aa10.24□□□□□ -0.77
CAPN1-225ENST00000533704 LRRC40Q9H9A6 602 aa10.24□□□□□ -0.77
CAPN1-225ENST00000533704 UCK1Q9HA47 277 aa10.24□□□□□ -0.77
CAPN1-225ENST00000533704 APMAPQ9HDC9 416 aa10.24□□□□□ -0.77
CAPN1-225ENST00000533704 WASH6PQ9NQA3 447 aa10.24□□□□□ -0.77
CAPN1-225ENST00000533704 IMP3Q9NV31 184 aaKnown RBP10.24□□□□□ -0.77
CAPN1-225ENST00000533704 SMOXQ9NWM0 555 aa10.24□□□□□ -0.77
CAPN1-225ENST00000533704 OGFRQ9NZT2 677 aa10.24□□□□□ -0.77
CAPN1-225ENST00000533704 PDP2Q9P2J9 529 aa10.24□□□□□ -0.77
CAPN1-225ENST00000533704 PCDHGA4Q9Y5G9 962 aa10.24□□□□□ -0.77
CAPN1-225ENST00000533704 PCDHGA3Q9Y5H0 932 aa10.24□□□□□ -0.77
CAPN1-225ENST00000533704 CFAP20Q9Y6A4 193 aaKnown RBP10.24□□□□□ -0.77
CAPN1-225ENST00000533704 MN1Q10571 1320 aaPredicted RBP10.24□□□□□ -0.77
CAPN1-225ENST00000533704 LOC400499M0QZD8 3231 aa10.24□□□□□ -0.77
CAPN1-225ENST00000533704 PRR19A6NJB7 356 aa10.23□□□□□ -0.77
CAPN1-225ENST00000533704 TK2O00142 265 aa10.23□□□□□ -0.77
CAPN1-225ENST00000533704 POLR1CO15160 346 aaPredicted RBP10.23□□□□□ -0.77
CAPN1-225ENST00000533704 KRT86O43790 486 aa10.23□□□□□ -0.77
CAPN1-225ENST00000533704 RAD1O60671 282 aa10.23□□□□□ -0.77
CAPN1-225ENST00000533704 KCNJ13O60928 360 aa10.23□□□□□ -0.77
CAPN1-225ENST00000533704 C1QL1O75973 258 aa10.23□□□□□ -0.77
CAPN1-225ENST00000533704 RALBP11234 206 aa10.23□□□□□ -0.77
CAPN1-225ENST00000533704 SPTBP11277 2137 aa10.23□□□□□ -0.77
CAPN1-225ENST00000533704 WT1P19544 449 aaPredicted RBP10.23□□□□□ -0.77
CAPN1-225ENST00000533704 MC4RP32245 332 aa10.23□□□□□ -0.77
CAPN1-225ENST00000533704 HADHAP40939 763 aa10.23□□□□□ -0.77
CAPN1-225ENST00000533704 LMAN1P49257 510 aa10.23□□□□□ -0.77
CAPN1-225ENST00000533704 ZNF140P52738 457 aaPredicted RBP10.23□□□□□ -0.77
CAPN1-225ENST00000533704 GSDMDP57764 484 aa10.23□□□□□ -0.77
CAPN1-225ENST00000533704 CYP4F2P78329 520 aa10.23□□□□□ -0.77
CAPN1-225ENST00000533704 XIAPP98170 497 aa10.23□□□□□ -0.77
CAPN1-225ENST00000533704 MC2RQ01718 297 aa10.23□□□□□ -0.77
CAPN1-225ENST00000533704 DMPKQ09013 629 aa10.23□□□□□ -0.77
CAPN1-225ENST00000533704 KLF1Q13351 362 aaPredicted RBP10.23□□□□□ -0.77
CAPN1-225ENST00000533704 SNX1Q13596 522 aa10.23□□□□□ -0.77
CAPN1-225ENST00000533704 POU6F1Q14863 301 aa10.23□□□□□ -0.77
CAPN1-225ENST00000533704 RPE65Q16518 533 aa10.23□□□□□ -0.77
CAPN1-225ENST00000533704 P3H1Q32P28 736 aa10.23□□□□□ -0.77
CAPN1-225ENST00000533704 ZRANB3Q5FWF4 1079 aa10.23□□□□□ -0.77
CAPN1-225ENST00000533704 CACHD1Q5VU97 1274 aa10.23□□□□□ -0.77
CAPN1-225ENST00000533704 DENND5AQ6IQ26 1287 aa10.23□□□□□ -0.77
CAPN1-225ENST00000533704 DUS1LQ6P1R4 473 aaKnown RBP10.23□□□□□ -0.77
CAPN1-225ENST00000533704 TAS2R42Q7RTR8 314 aa10.23□□□□□ -0.77
CAPN1-225ENST00000533704 DTX1Q86Y01 620 aa10.23□□□□□ -0.77
CAPN1-225ENST00000533704 CACNA2D3Q8IZS8 1091 aa10.23□□□□□ -0.77
CAPN1-225ENST00000533704 RNF10Q8N5U6 811 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms