RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 C9P02748 559 aa9.66□□□□□ -0.86
NUP98-220ENST00000533346 APRTP07741 180 aa9.66□□□□□ -0.86
NUP98-220ENST00000533346 ZSCAN5DPP0CG00 497 aa9.66□□□□□ -0.86
NUP98-220ENST00000533346 THRAP10827 490 aa9.66□□□□□ -0.86
NUP98-220ENST00000533346 MLNP12872 115 aa9.66□□□□□ -0.86
NUP98-220ENST00000533346 ATP1B2P14415 290 aaPredicted RBP9.66□□□□□ -0.86
NUP98-220ENST00000533346 TPH1P17752 444 aa9.66□□□□□ -0.86
NUP98-220ENST00000533346 FOXN2P32314 431 aa9.66□□□□□ -0.86
NUP98-220ENST00000533346 COILP38432 576 aaPredicted RBP9.66□□□□□ -0.86
NUP98-220ENST00000533346 GRIA1P42261 906 aa9.66□□□□□ -0.86
NUP98-220ENST00000533346 NSG1P42857 185 aa9.66□□□□□ -0.86
NUP98-220ENST00000533346 KCNJ1P48048 391 aa9.66□□□□□ -0.86
NUP98-220ENST00000533346 FNTAP49354 379 aa9.66□□□□□ -0.86
NUP98-220ENST00000533346 OR1D5P58170 312 aa9.66□□□□□ -0.86
NUP98-220ENST00000533346 GABREP78334 506 aa9.66□□□□□ -0.86
NUP98-220ENST00000533346 POU6F1Q14863 301 aa9.66□□□□□ -0.86
NUP98-220ENST00000533346 LYPLAL1Q5VWZ2 237 aa9.66□□□□□ -0.86
NUP98-220ENST00000533346 CAPRIN2Q6IMN6 1127 aaKnown RBP9.66□□□□□ -0.86
NUP98-220ENST00000533346 LRRC8BQ6P9F7 803 aa9.66□□□□□ -0.86
NUP98-220ENST00000533346 CERS6Q6ZMG9 384 aa9.66□□□□□ -0.86
NUP98-220ENST00000533346 TMEM26Q6ZUK4 368 aa9.66□□□□□ -0.86
NUP98-220ENST00000533346 ZNF534Q76KX8 674 aa9.66□□□□□ -0.86
NUP98-220ENST00000533346 RAB11FIP2Q7L804 512 aa9.66□□□□□ -0.86
NUP98-220ENST00000533346 ARHGAP22Q7Z5H3 698 aa9.66□□□□□ -0.86
NUP98-220ENST00000533346 B3GNT8Q7Z7M8 397 aa9.66□□□□□ -0.86
NUP98-220ENST00000533346 TRAPPC5Q8IUR0 188 aa9.66□□□□□ -0.86
NUP98-220ENST00000533346 DNAAF3Q8N9W5 541 aa9.66□□□□□ -0.86
NUP98-220ENST00000533346 OR10G6Q8NH81 332 aa9.66□□□□□ -0.86
NUP98-220ENST00000533346 GDAP1Q8TB36 358 aa9.66□□□□□ -0.86
NUP98-220ENST00000533346 DNAJC1Q96KC8 554 aaKnown RBP9.66□□□□□ -0.86
NUP98-220ENST00000533346 SLC38A3Q99624 504 aa9.66□□□□□ -0.86
NUP98-220ENST00000533346 CMKLR1Q99788 373 aa9.66□□□□□ -0.86
NUP98-220ENST00000533346 CCM2Q9BSQ5 444 aa9.66□□□□□ -0.86
NUP98-220ENST00000533346 IL22Q9GZX6 179 aa9.66□□□□□ -0.86
NUP98-220ENST00000533346 SLC40A1Q9NP59 571 aa9.66□□□□□ -0.86
NUP98-220ENST00000533346 THSD1Q9NS62 852 aa9.66□□□□□ -0.86
NUP98-220ENST00000533346 TREX1Q9NSU2 369 aa9.66□□□□□ -0.86
NUP98-220ENST00000533346 KCNK4Q9NYG8 393 aa9.66□□□□□ -0.86
NUP98-220ENST00000533346 SEMA5BQ9P283 1151 aa9.66□□□□□ -0.86
NUP98-220ENST00000533346 EPHA6Q9UF33 1036 aa9.66□□□□□ -0.86
NUP98-220ENST00000533346 CRLS1Q9UJA2 301 aa9.66□□□□□ -0.86
NUP98-220ENST00000533346 SATB2Q9UPW6 733 aa9.66□□□□□ -0.86
NUP98-220ENST00000533346 TCAF1Q9Y4C2 921 aa9.66□□□□□ -0.86
NUP98-220ENST00000533346 URB1O60287 2271 aaKnown RBP9.66□□□□□ -0.86
NUP98-220ENST00000533346 MN1Q10571 1320 aaPredicted RBP9.65□□□□□ -0.86
NUP98-220ENST00000533346 IGHV5-10-1A0A0J9YXX1 117 aa9.65□□□□□ -0.86
NUP98-220ENST00000533346 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.65□□□□□ -0.86
NUP98-220ENST00000533346 PLD2O14939 933 aa9.65□□□□□ -0.86
NUP98-220ENST00000533346 DUX1O43812 170 aa9.65□□□□□ -0.86
NUP98-220ENST00000533346 PHF2O75151 1096 aa9.65□□□□□ -0.86
NUP98-220ENST00000533346 MPOP05164 745 aa9.65□□□□□ -0.86
NUP98-220ENST00000533346 ANKRD34CP0C6C1 535 aa9.65□□□□□ -0.86
NUP98-220ENST00000533346 ALDH4A1P30038 563 aa9.65□□□□□ -0.86
NUP98-220ENST00000533346 HALP42357 657 aa9.65□□□□□ -0.86
NUP98-220ENST00000533346 CD151P48509 253 aa9.65□□□□□ -0.86
NUP98-220ENST00000533346 RPA4Q13156 261 aa9.65□□□□□ -0.86
NUP98-220ENST00000533346 KCNJ11Q14654 390 aa9.65□□□□□ -0.86
NUP98-220ENST00000533346 GSE1Q14687 1217 aa9.65□□□□□ -0.86
NUP98-220ENST00000533346 CLCA4Q14CN2 919 aa9.65□□□□□ -0.86
NUP98-220ENST00000533346 TTC27Q6P3X3 843 aa9.65□□□□□ -0.86
NUP98-220ENST00000533346 CCDC137Q6PK04 289 aaKnown RBP9.65□□□□□ -0.86
NUP98-220ENST00000533346 CRTC3Q6UUV7 619 aa9.65□□□□□ -0.86
NUP98-220ENST00000533346 PPP1R21Q6ZMI0 780 aa9.65□□□□□ -0.86
NUP98-220ENST00000533346 PRUNE1Q86TP1 453 aa9.65□□□□□ -0.86
NUP98-220ENST00000533346 SERPINA9Q86WD7 417 aa9.65□□□□□ -0.86
NUP98-220ENST00000533346 FBXO39Q8N4B4 442 aa9.65□□□□□ -0.86
NUP98-220ENST00000533346 Q8N9G6 341 aaPredicted RBP9.65□□□□□ -0.86
NUP98-220ENST00000533346 ZNF248Q8NDW4 579 aa9.65□□□□□ -0.86
NUP98-220ENST00000533346 MCUQ8NE86 351 aa9.65□□□□□ -0.86
NUP98-220ENST00000533346 HM13Q8TCT9 377 aa9.65□□□□□ -0.86
NUP98-220ENST00000533346 GRK7Q8WTQ7 553 aa9.65□□□□□ -0.86
NUP98-220ENST00000533346 COG1Q8WTW3 980 aa9.65□□□□□ -0.86
NUP98-220ENST00000533346 MAGOHBQ96A72 148 aaKnown RBP9.65□□□□□ -0.86
NUP98-220ENST00000533346 SGF29Q96ES7 293 aa9.65□□□□□ -0.86
NUP98-220ENST00000533346 CCDC97Q96F63 343 aaPredicted RBP9.65□□□□□ -0.86
NUP98-220ENST00000533346 DCUN1D1Q96GG9 259 aa9.65□□□□□ -0.86
NUP98-220ENST00000533346 KIFC1Q9BW19 673 aa9.65□□□□□ -0.86
NUP98-220ENST00000533346 DPH1Q9BZG8 443 aa9.65□□□□□ -0.86
NUP98-220ENST00000533346 SUDS3Q9H7L9 328 aaPredicted RBP9.65□□□□□ -0.86
NUP98-220ENST00000533346 RNF14Q9UBS8 474 aa9.65□□□□□ -0.86
NUP98-220ENST00000533346 ATXN7L1Q9ULK2 861 aaPredicted RBP9.65□□□□□ -0.86
NUP98-220ENST00000533346 WDR37Q9Y2I8 494 aa9.65□□□□□ -0.86
NUP98-220ENST00000533346 PCDHGA3Q9Y5H0 932 aa9.65□□□□□ -0.86
NUP98-220ENST00000533346 FREM2Q5SZK8 3169 aa9.65□□□□□ -0.86
NUP98-220ENST00000533346 ACACAQ13085 2346 aa9.65□□□□□ -0.87
NUP98-220ENST00000533346 MAGEB16A2A368 324 aa9.64□□□□□ -0.87
NUP98-220ENST00000533346 OR2AG2A6NM03 316 aa9.64□□□□□ -0.87
NUP98-220ENST00000533346 B4E171 279 aa9.64□□□□□ -0.87
NUP98-220ENST00000533346 VIPP01282 170 aa9.64□□□□□ -0.87
NUP98-220ENST00000533346 KRT14P02533 472 aa9.64□□□□□ -0.87
NUP98-220ENST00000533346 CD82P27701 267 aa9.64□□□□□ -0.87
NUP98-220ENST00000533346 RBMS1P29558 406 aaKnown RBP9.64□□□□□ -0.87
NUP98-220ENST00000533346 AKT1P31749 480 aa9.64□□□□□ -0.87
NUP98-220ENST00000533346 CSF2RBP32927 897 aa9.64□□□□□ -0.87
NUP98-220ENST00000533346 PPARGP37231 505 aaPredicted RBP9.64□□□□□ -0.87
NUP98-220ENST00000533346 TSPAN7P41732 249 aa9.64□□□□□ -0.87
NUP98-220ENST00000533346 LMAN1P49257 510 aa9.64□□□□□ -0.87
NUP98-220ENST00000533346 CDKN1CP49918 316 aaPredicted RBP9.64□□□□□ -0.87
NUP98-220ENST00000533346 ARSDP51689 593 aa9.64□□□□□ -0.87
NUP98-220ENST00000533346 PCBP4P57723 403 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms