RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 ECHDC2Q86YB7 292 aa8.05□□□□□ -1.12
CTNND1-231ENST00000532463 CRYBG2Q8N1P7 616 aa8.05□□□□□ -1.12
CTNND1-231ENST00000532463 CADM2Q8N3J6 435 aa8.05□□□□□ -1.12
CTNND1-231ENST00000532463 TCF25Q9BQ70 676 aa8.05□□□□□ -1.12
CTNND1-231ENST00000532463 TRMOQ9BU70 441 aa8.05□□□□□ -1.12
CTNND1-231ENST00000532463 POLR1EQ9GZS1 481 aaKnown RBP8.05□□□□□ -1.12
CTNND1-231ENST00000532463 GDF3Q9NR23 364 aa8.05□□□□□ -1.12
CTNND1-231ENST00000532463 PCDHB16Q9NRJ7 776 aa8.05□□□□□ -1.12
CTNND1-231ENST00000532463 PARPBPQ9NWS1 579 aa8.05□□□□□ -1.12
CTNND1-231ENST00000532463 ANKARQ7Z5J8 1434 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 ELOVL7A1L3X0 281 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 ZSCAN5DPP0CG00 497 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 CPN2P22792 545 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 CSTF2P33240 577 aaKnown RBP eCLIP8.04□□□□□ -1.121e-7■■□□□ 12.3
CTNND1-231ENST00000532463 IL6STP40189 918 aaPredicted RBP8.04□□□□□ -1.12
CTNND1-231ENST00000532463 GRIA2P42262 883 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 CLCN2P51788 898 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 CDK3Q00526 305 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 RRP1BQ14684 758 aaKnown RBP8.04□□□□□ -1.12
CTNND1-231ENST00000532463 RAB39AQ14964 217 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 ATXN7L3Q14CW9 347 aaPredicted RBP8.04□□□□□ -1.12
CTNND1-231ENST00000532463 FAM98CQ17RN3 349 aaKnown RBP8.04□□□□□ -1.12
CTNND1-231ENST00000532463 TIGD6Q17RP2 521 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 PTPN20Q4JDL3 420 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 SLC22A16Q86VW1 577 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 SPPL2CQ8IUH8 684 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 PIAS4Q8N2W9 510 aaPredicted RBP8.04□□□□□ -1.12
CTNND1-231ENST00000532463 CPSF7Q8N684 471 aaKnown RBP8.04□□□□□ -1.12
CTNND1-231ENST00000532463 FRZBQ92765 325 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 MFSD3Q96ES6 412 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 HTATIP2Q9BUP3 242 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 TMEM106CQ9BVX2 250 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 CCDC106Q9BWC9 280 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 PLEKHA3Q9HB20 300 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 AGPAT3Q9NRZ7 376 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 CALML5Q9NZT1 146 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 SLAIN2Q9P270 581 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 HCN2Q9UL51 889 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 WASF2Q9Y6W5 498 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 KDM5AP29375 1690 aaKnown RBP8.04□□□□□ -1.12
CTNND1-231ENST00000532463 CYB561D2O14569 222 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 UGT1A9O60656 530 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 ARL6IP5O75915 188 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 SCELO95171 688 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 UGT1A6P19224 532 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 CD72P21854 359 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 UGT1A1P22309 533 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 UGT1A4P22310 534 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 RPL22P35268 128 aaKnown RBP8.04□□□□□ -1.12
CTNND1-231ENST00000532463 UGT1A3P35503 534 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 GRK6P43250 576 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 MAGEB1P43366 347 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 TBX4P57082 545 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 SPP2Q13103 211 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 CNPY1Q3B7I2 92 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 GNASQ5JWF2 1037 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 UBAP2Q5T6F2 1119 aaKnown RBP8.04□□□□□ -1.12
CTNND1-231ENST00000532463 GPR157Q5UAW9 335 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 NUP54Q7Z3B4 507 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 SLC41A1Q8IVJ1 513 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 ZNF101Q8IZC7 436 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 SCRN2Q96FV2 425 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 ZNF570Q96NI8 536 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 PSD2Q9BQI7 771 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 VPS25Q9BRG1 176 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 TARS2Q9BW92 718 aaKnown RBP8.04□□□□□ -1.12
CTNND1-231ENST00000532463 DENND2DQ9H6A0 471 aaPredicted RBP8.04□□□□□ -1.12
CTNND1-231ENST00000532463 UGT1A7Q9HAW7 530 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 UGT1A10Q9HAW8 530 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 UGT1A8Q9HAW9 530 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 BRD7Q9NPI1 651 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 SPG21Q9NZD8 308 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 TBX20Q9UMR3 447 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 SULT1C2O00338 296 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 ADAMTS3O15072 1205 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 CHADO15335 359 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 NME6O75414 186 aaPredicted RBP8.04□□□□□ -1.12
CTNND1-231ENST00000532463 B3GAT3O94766 335 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 RENP00797 406 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 TRBC1P01850 177 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 CD36P16671 472 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 EPHA3P29320 983 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 TAS2R39P59534 338 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 PTPAQ15257 358 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 PPP1R15BQ5SWA1 713 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 MSANTD2Q6P1R3 559 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 SGMS1Q86VZ5 419 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 CBR4Q8N4T8 237 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 RAET1EQ8TD07 263 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 KCNN1Q92952 543 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 LRRC58Q96CX6 371 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 SLC41A3Q96GZ6 507 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 PHOX2BQ99453 314 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 SAMD10Q9BYL1 202 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 PCDHA11Q9Y5I1 949 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 ADAMTS12P58397 1594 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 A0A0J9YYE9 177 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 OR6C65A6NJZ3 312 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 A8MXE2 369 aa8.04□□□□□ -1.12
CTNND1-231ENST00000532463 SGCEO43556 437 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms