RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 POU5F1Q01860 360 aaKnown RBP3.73□□□□□ -1.81
PTPRK-220ENST00000531466 CDC16Q13042 620 aa3.73□□□□□ -1.81
PTPRK-220ENST00000531466 EFR3AQ14156 821 aa3.73□□□□□ -1.81
PTPRK-220ENST00000531466 RRS1Q15050 365 aaKnown RBP3.73□□□□□ -1.81
PTPRK-220ENST00000531466 LCN10Q6JVE6 187 aa3.73□□□□□ -1.81
PTPRK-220ENST00000531466 Q8N377 158 aa3.73□□□□□ -1.81
PTPRK-220ENST00000531466 OTUD6BQ8N6M0 293 aa3.73□□□□□ -1.81
PTPRK-220ENST00000531466 TMEM178AQ8NBL3 297 aa3.73□□□□□ -1.81
PTPRK-220ENST00000531466 OR2T12Q8NG77 320 aa3.73□□□□□ -1.81
PTPRK-220ENST00000531466 PPP4R1Q8TF05 950 aa3.73□□□□□ -1.81
PTPRK-220ENST00000531466 KIF1BPQ96EK5 621 aa3.73□□□□□ -1.81
PTPRK-220ENST00000531466 SLC47A1Q96FL8 570 aa3.73□□□□□ -1.81
PTPRK-220ENST00000531466 HARBI1Q96MB7 349 aa3.73□□□□□ -1.81
PTPRK-220ENST00000531466 LIMA1Q9UHB6 759 aaKnown RBP3.73□□□□□ -1.81
PTPRK-220ENST00000531466 BICDL2A1A5D9 508 aa3.72□□□□□ -1.81
PTPRK-220ENST00000531466 BMP10O95393 424 aa3.72□□□□□ -1.81
PTPRK-220ENST00000531466 HSP90AB1P08238 724 aaKnown RBP3.72□□□□□ -1.81
PTPRK-220ENST00000531466 DUX4L4P0CJ87 422 aa3.72□□□□□ -1.81
PTPRK-220ENST00000531466 PSMC2P35998 433 aaKnown RBP3.72□□□□□ -1.81
PTPRK-220ENST00000531466 GGT5P36269 586 aa3.72□□□□□ -1.81
PTPRK-220ENST00000531466 MMP15P51511 669 aa3.72□□□□□ -1.81
PTPRK-220ENST00000531466 ARL4CP56559 192 aa3.72□□□□□ -1.81
PTPRK-220ENST00000531466 TMEM95Q3KNT9 176 aa3.72□□□□□ -1.81
PTPRK-220ENST00000531466 C2CD6Q53TS8 623 aa3.72□□□□□ -1.81
PTPRK-220ENST00000531466 SLC25A30Q5SVS4 291 aa3.72□□□□□ -1.81
PTPRK-220ENST00000531466 GPRIN3Q6ZVF9 776 aa3.72□□□□□ -1.81
PTPRK-220ENST00000531466 SLC16A9Q7RTY1 509 aa3.72□□□□□ -1.81
PTPRK-220ENST00000531466 PCGF5Q86SE9 256 aa3.72□□□□□ -1.81
PTPRK-220ENST00000531466 ADIPOR2Q86V24 386 aa3.72□□□□□ -1.81
PTPRK-220ENST00000531466 PM20D2Q8IYS1 436 aa3.72□□□□□ -1.81
PTPRK-220ENST00000531466 SEMA4DQ92854 862 aa3.72□□□□□ -1.81
PTPRK-220ENST00000531466 TBC1D20Q96BZ9 403 aa3.72□□□□□ -1.81
PTPRK-220ENST00000531466 LRRC61Q9BV99 259 aa3.72□□□□□ -1.81
PTPRK-220ENST00000531466 TMX4Q9H1E5 349 aaPredicted RBP3.72□□□□□ -1.81
PTPRK-220ENST00000531466 KIF9Q9HAQ2 790 aa3.72□□□□□ -1.81
PTPRK-220ENST00000531466 COQ3Q9NZJ6 369 aa3.72□□□□□ -1.81
PTPRK-220ENST00000531466 EPHA6Q9UF33 1036 aa3.72□□□□□ -1.81
PTPRK-220ENST00000531466 MAN1B1Q9UKM7 699 aa3.72□□□□□ -1.81
PTPRK-220ENST00000531466 PRRC2AP48634 2157 aaKnown RBP3.72□□□□□ -1.81
PTPRK-220ENST00000531466 LRRC53A6NM62 1247 aa3.71□□□□□ -1.82
PTPRK-220ENST00000531466 EIF4E1BA6NMX2 242 aaKnown RBP3.71□□□□□ -1.82
PTPRK-220ENST00000531466 BDNFP23560 247 aa3.71□□□□□ -1.82
PTPRK-220ENST00000531466 PTOV1Q86YD1 416 aa3.71□□□□□ -1.82
PTPRK-220ENST00000531466 PLD3Q8IV08 490 aa3.71□□□□□ -1.82
PTPRK-220ENST00000531466 SLC5A8Q8N695 610 aa3.71□□□□□ -1.82
PTPRK-220ENST00000531466 PDILTQ8N807 584 aa3.71□□□□□ -1.82
PTPRK-220ENST00000531466 MAGED4Q96JG8 741 aa3.71□□□□□ -1.82
PTPRK-220ENST00000531466 SEMA3CQ99985 751 aa3.71□□□□□ -1.82
PTPRK-220ENST00000531466 RAB11FIP5Q9BXF6 653 aa3.71□□□□□ -1.82
PTPRK-220ENST00000531466 C1orf226A1L170 272 aa3.7□□□□□ -1.82
PTPRK-220ENST00000531466 GPR137BO60478 399 aa3.7□□□□□ -1.82
PTPRK-220ENST00000531466 CDC123O75794 336 aaPredicted RBP3.7□□□□□ -1.82
PTPRK-220ENST00000531466 VDRP11473 427 aa3.7□□□□□ -1.82
PTPRK-220ENST00000531466 PTGER3P43115 390 aa3.7□□□□□ -1.82
PTPRK-220ENST00000531466 SSR1P43307 286 aaKnown RBP3.7□□□□□ -1.82
PTPRK-220ENST00000531466 TRAPPC10P48553 1259 aa3.7□□□□□ -1.82
PTPRK-220ENST00000531466 CCR5P51681 352 aa3.7□□□□□ -1.82
PTPRK-220ENST00000531466 CD81P60033 236 aa3.7□□□□□ -1.82
PTPRK-220ENST00000531466 DCTN2Q13561 401 aaKnown RBP3.7□□□□□ -1.82
PTPRK-220ENST00000531466 PDE1CQ14123 709 aaPredicted RBP3.7□□□□□ -1.82
PTPRK-220ENST00000531466 RAB6CQ53S08 254 aa3.7□□□□□ -1.82
PTPRK-220ENST00000531466 IL27RAQ6UWB1 636 aa3.7□□□□□ -1.82
PTPRK-220ENST00000531466 CREBRFQ8IUR6 639 aa3.7□□□□□ -1.82
PTPRK-220ENST00000531466 NKAPQ8N5F7 415 aaKnown RBP3.7□□□□□ -1.82
PTPRK-220ENST00000531466 OR1J2Q8NGS2 313 aa3.7□□□□□ -1.82
PTPRK-220ENST00000531466 RAB6CQ9H0N0 254 aa3.7□□□□□ -1.82
PTPRK-220ENST00000531466 RSPH9Q9H1X1 276 aaPredicted RBP3.7□□□□□ -1.82
PTPRK-220ENST00000531466 MPP6Q9NZW5 540 aa3.7□□□□□ -1.82
PTPRK-220ENST00000531466 RPGRIP1LQ68CZ1 1315 aa3.7□□□□□ -1.82
PTPRK-220ENST00000531466 IGHV4-61A0A0C4DH41 118 aa3.69□□□□□ -1.82
PTPRK-220ENST00000531466 FAM237AA0A1B0GTK4 181 aa3.69□□□□□ -1.82
PTPRK-220ENST00000531466 CCDC189A1A4V9 331 aa3.69□□□□□ -1.82
PTPRK-220ENST00000531466 OR6C76A6NM76 312 aa3.69□□□□□ -1.82
PTPRK-220ENST00000531466 C15orf62A8K5M9 175 aa3.69□□□□□ -1.82
PTPRK-220ENST00000531466 KLLNB2CW77 178 aa3.69□□□□□ -1.82
PTPRK-220ENST00000531466 IGKV3-15P01624 115 aa3.69□□□□□ -1.82
PTPRK-220ENST00000531466 IGHV4-59P01825 116 aa3.69□□□□□ -1.82
PTPRK-220ENST00000531466 ZNF182P17025 639 aaPredicted RBP3.69□□□□□ -1.82
PTPRK-220ENST00000531466 HNF4AP41235 474 aa3.69□□□□□ -1.82
PTPRK-220ENST00000531466 GRK6P43250 576 aa3.69□□□□□ -1.82
PTPRK-220ENST00000531466 IRX3P78415 501 aaPredicted RBP3.69□□□□□ -1.82
PTPRK-220ENST00000531466 UBE3AQ05086 875 aa3.69□□□□□ -1.82
PTPRK-220ENST00000531466 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.69□□□□□ -1.82
PTPRK-220ENST00000531466 P2RY6Q15077 328 aa3.69□□□□□ -1.82
PTPRK-220ENST00000531466 TAF1BQ53T94 588 aaPredicted RBP3.69□□□□□ -1.82
PTPRK-220ENST00000531466 HSP90AB3PQ58FF7 597 aa3.69□□□□□ -1.82
PTPRK-220ENST00000531466 NSUN5P2Q63ZY6 315 aa3.69□□□□□ -1.82
PTPRK-220ENST00000531466 Q6ZR54 194 aa3.69□□□□□ -1.82
PTPRK-220ENST00000531466 GET4Q7L5D6 327 aaPredicted RBP3.69□□□□□ -1.82
PTPRK-220ENST00000531466 FASTKD5Q7L8L6 764 aaKnown RBP3.69□□□□□ -1.82
PTPRK-220ENST00000531466 ADGRA1Q86SQ6 560 aa3.69□□□□□ -1.82
PTPRK-220ENST00000531466 C1orf52Q8N6N3 182 aaKnown RBP3.69□□□□□ -1.82
PTPRK-220ENST00000531466 ZNF383Q8NA42 475 aa3.69□□□□□ -1.82
PTPRK-220ENST00000531466 ZCCHC10Q8TBK6 192 aa3.69□□□□□ -1.82
PTPRK-220ENST00000531466 ZBTB10Q96DT7 871 aa3.69□□□□□ -1.82
PTPRK-220ENST00000531466 SIL1Q9H173 461 aa3.69□□□□□ -1.82
PTPRK-220ENST00000531466 P2RY12Q9H244 342 aa3.69□□□□□ -1.82
PTPRK-220ENST00000531466 PPCSQ9HAB8 311 aa3.69□□□□□ -1.82
PTPRK-220ENST00000531466 ASAH2Q9NR71 780 aa3.69□□□□□ -1.82
PTPRK-220ENST00000531466 COPG2Q9UBF2 871 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms