RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 SAR1BQ9Y6B6 198 aa9.05□□□□□ -0.96
CHMP4A-205ENST00000531158 POLEQ07864 2286 aa9.05□□□□□ -0.96
CHMP4A-205ENST00000531158 C1orf232A0A0U1RR37 186 aa9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 OR52A4PA6NMU1 304 aa9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 MATN3O15232 486 aa9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 TOX3O15405 576 aaPredicted RBP9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 KATNA1O75449 491 aa9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 SPAG6O75602 509 aa9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 UBXN7O94888 489 aa9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 SEC31AO94979 1220 aaKnown RBP9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 GZMAP12544 262 aa9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 DESP17661 470 aa9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 NFKBIAP25963 317 aa9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 PRKCIP41743 596 aa9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 CAPZBP47756 277 aa9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 CLCNKAP51800 687 aa9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 ITKQ08881 620 aa9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 SLC10A2Q12908 348 aaPredicted RBP9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 SEMA5AQ13591 1074 aa9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 DNASE1L3Q13609 305 aa9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 IL10RAQ13651 578 aa9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 DPYSL3Q14195 570 aa9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 GPR18Q14330 331 aa9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 KCNAB1Q14722 419 aa9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 SEPT7Q16181 437 aaKnown RBP9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 ATP13A4Q4VNC1 1196 aa9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 BOLA3Q53S33 107 aa9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 PWWP2BQ6NUJ5 590 aa9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 FAM199XQ6PEV8 388 aaPredicted RBP9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 CRTC3Q6UUV7 619 aa9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 FAM92BQ6ZTR7 304 aa9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 MAMDC2Q7Z304 686 aaPredicted RBP9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 PRSS42Q7Z5A4 293 aa9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 RAVER1Q8IY67 606 aaKnown RBP9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 BBS5Q8N3I7 341 aa9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 CNTD1Q8N815 330 aa9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 NIPA2Q8N8Q9 360 aa9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 Q8NA96 180 aa9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 GALNT11Q8NCW6 608 aa9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 TEKT4Q8WW24 435 aa9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 KLHL6Q8WZ60 621 aa9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 TRIB3Q96RU7 358 aa9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 FUT8Q9BYC5 575 aa9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 TWSG1Q9GZX9 223 aa9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 ISCUQ9H1K1 167 aa9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 OR2AG1Q9H205 316 aa9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 CARD9Q9H257 536 aa9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 ACBD3Q9H3P7 528 aa9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 DEF6Q9H4E7 631 aa9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 EPB41L1Q9H4G0 881 aa9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 FAM83DQ9H4H8 585 aa9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 ACTL8Q9H568 366 aa9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 STN1Q9H668 368 aaKnown RBP9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 RMI1Q9H9A7 625 aa9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 PCDH9Q9HC56 1237 aa9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 RBM22Q9NW64 420 aaKnown RBP eCLIP9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 LNPEPQ9UIQ6 1025 aa9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 WDR37Q9Y2I8 494 aa9.04□□□□□ -0.96
CHMP4A-205ENST00000531158 IGHV5-51A0A0C4DH38 117 aa9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 PIPSLA2A3N6 862 aa9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 OR5K4A6NMS3 321 aa9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 ANKRD66B4E2M5 251 aa9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 MTX2O75431 263 aa9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 SASH3O75995 380 aa9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 SERPING1P05155 500 aa9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 PIRTP0C851 137 aa9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 FOLR1P15328 257 aa9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 TCP1P17987 556 aaKnown RBP9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 NELFEP18615 380 aaKnown RBP9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 RPL10P27635 214 aaKnown RBP9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 CA5AP35218 305 aa9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 SERPINB6P35237 376 aa9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 EPHB1P54762 984 aa9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 DRG2P55039 364 aaKnown RBP9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 RPL26P61254 145 aaKnown RBP9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 GBE1Q04446 702 aa9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 ZBTB17Q13105 803 aa9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 GALNT3Q14435 633 aa9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 IL11RAQ14626 422 aa9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 PAFAH1B3Q15102 231 aaKnown RBP9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 ASTE1Q2TB18 679 aaPredicted RBP9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 BEND6Q5SZJ8 279 aaPredicted RBP9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 FAM69BQ5VUD6 431 aa9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 C1QL3Q5VWW1 255 aa9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 ALS2CLQ60I27 953 aa9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 HGSNATQ68CP4 663 aa9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 PPP1R2P3Q6NXS1 205 aa9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 ABRAXAS1Q6UWZ7 409 aa9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 HDXQ7Z353 690 aa9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 PHYKPLQ8IUZ5 450 aa9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 RASGRP3Q8IV61 690 aa9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 RNF10Q8N5U6 811 aaKnown RBP9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 PQLC3Q8N755 202 aa9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 SLC38A9Q8NBW4 561 aa9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 GPR150Q8NGU9 434 aa9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 CPT1CQ8TCG5 803 aa9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 STAMBPL1Q96FJ0 436 aa9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 TSGA13Q96PP4 275 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms