RNA–Protein interactions for RNA: ENST00000529970.5

ARHGEF12-208, Transcript of Rho guanine nucleotide exchange factor 12, human

TSL 2

Gene ARHGEF12, Length 3,786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF12-208	ENST00000529970	RNASEH2B	Q5TBB1	312 aa	Known RBP	4.15	□□□□□ -1.74
ARHGEF12-208	ENST00000529970	LRRC38	Q5VT99	294 aa		4.15	□□□□□ -1.74
ARHGEF12-208	ENST00000529970	SCARA3	Q6AZY7	606 aa		4.15	□□□□□ -1.74
ARHGEF12-208	ENST00000529970	NPNT	Q6UXI9	565 aa		4.15	□□□□□ -1.74
ARHGEF12-208	ENST00000529970	LIMS2	Q7Z4I7	341 aa		4.15	□□□□□ -1.74
ARHGEF12-208	ENST00000529970	PPP1R35	Q8TAP8	253 aa		4.15	□□□□□ -1.74
ARHGEF12-208	ENST00000529970	KCTD13	Q8WZ19	329 aa		4.15	□□□□□ -1.74
ARHGEF12-208	ENST00000529970	MIB2	Q96AX9	1013 aa		4.15	□□□□□ -1.74
ARHGEF12-208	ENST00000529970	FAM111A	Q96PZ2	611 aa		4.15	□□□□□ -1.74
ARHGEF12-208	ENST00000529970	TSSK1B	Q9BXA7	367 aa		4.15	□□□□□ -1.74
ARHGEF12-208	ENST00000529970	MIS12	Q9H081	205 aa		4.15	□□□□□ -1.74
ARHGEF12-208	ENST00000529970	SMYD3	Q9H7B4	428 aa		4.15	□□□□□ -1.74
ARHGEF12-208	ENST00000529970	LRRC4	Q9HBW1	653 aa		4.15	□□□□□ -1.74
ARHGEF12-208	ENST00000529970	DRG1	Q9Y295	367 aa	Known RBP	4.15	□□□□□ -1.74
ARHGEF12-208	ENST00000529970	MAP4K5	Q9Y4K4	846 aa		4.15	□□□□□ -1.74
ARHGEF12-208	ENST00000529970	HS3ST3A1	Q9Y663	406 aa		4.15	□□□□□ -1.74
ARHGEF12-208	ENST00000529970	SYNJ2BP-COX16	A0A087WUM0	186 aa		4.15	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	TP73	O15350	636 aa		4.15	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	TBL1X	O60907	577 aa		4.15	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	PCDH8	O95206	1070 aa		4.15	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	APRT	P07741	180 aa		4.15	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	CTSE	P14091	401 aa		4.15	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	JUND	P17535	347 aa		4.15	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	GPD1	P21695	349 aa		4.15	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	ELK3	P41970	407 aa		4.15	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	RAD23B	P54727	409 aa		4.15	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	ENPEP	Q07075	957 aa		4.15	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	MMRN1	Q13201	1228 aa		4.15	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	ELOC	Q15369	112 aa		4.15	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	PDK4	Q16654	411 aa		4.15	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	FNBP1L	Q5T0N5	605 aa		4.15	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	LGSN	Q5TDP6	509 aa		4.15	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	MTDH	Q86UE4	582 aa	Known RBP	4.15	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	HORMAD1	Q86X24	394 aa		4.15	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	AGGF1	Q8N302	714 aa	eCLIP	4.15	□□□□□ -1.75	4e-7	■■■■□ 25.7
ARHGEF12-208	ENST00000529970	TMEM130	Q8N3G9	435 aa		4.15	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	ZNF366	Q8N895	744 aa		4.15	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	TCP10L	Q8TDR4	215 aa		4.15	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	ZNF75CP	Q92670	426 aa	Predicted RBP	4.15	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	STMN2	Q93045	179 aa		4.15	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	RILP	Q96NA2	401 aa		4.15	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	NUDCD1	Q96RS6	583 aa		4.15	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	CPXM1	Q96SM3	734 aa		4.15	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	DPYSL5	Q9BPU6	564 aa		4.15	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	ORAI3	Q9BRQ5	295 aa		4.15	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	VPS11	Q9H270	941 aa		4.15	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	MANSC1	Q9H8J5	431 aa		4.15	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	COX16	Q9P0S2	106 aa		4.15	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	4.15	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	GULP1	Q9UBP9	304 aa		4.15	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	HESX1	Q9UBX0	185 aa		4.15	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	SIX4	Q9UIU6	781 aa		4.15	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	BLOC1S6	Q9UL45	172 aa		4.15	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	C15orf41	Q9Y2V0	281 aa		4.15	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	CEP192	Q8TEP8	1941 aa		4.15	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	MYO16	Q9Y6X6	1858 aa		4.15	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	SIGLEC16	A6NMB1	481 aa		4.14	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	TMEM229A	B2RXF0	380 aa		4.14	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	SLC31A1	O15431	190 aa		4.14	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	EDF1	O60869	148 aa	Known RBP	4.14	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	FBXO21	O94952	628 aa		4.14	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	UNC5C	O95185	931 aa		4.14	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	KIT	P10721	976 aa		4.14	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	ESRRA	P11474	423 aa	Predicted RBP	4.14	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	RHCE	P18577	417 aa		4.14	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	EPHB2	P29323	1055 aa		4.14	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	SDC4	P31431	198 aa		4.14	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	CSK	P41240	450 aa		4.14	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	PRIM2	P49643	509 aa		4.14	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	ECT2L	Q008S8	904 aa		4.14	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	C15orf59	Q2T9L4	293 aa	Predicted RBP	4.14	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	MUM1	Q2TAK8	710 aa		4.14	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	TNFAIP8L3	Q5GJ75	292 aa		4.14	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	KIAA1161	Q6NSJ0	714 aa		4.14	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	KYAT3	Q6YP21	454 aa	Known RBP	4.14	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	TIPARP	Q7Z3E1	657 aa	Known RBP	4.14	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	RD3	Q7Z3Z2	195 aa		4.14	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	FGD2	Q7Z6J4	655 aa		4.14	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	VASH2	Q86V25	355 aa		4.14	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	GKN2	Q86XP6	184 aa		4.14	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	TICAM1	Q8IUC6	712 aa		4.14	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	CEP97	Q8IW35	865 aa		4.14	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	SIX6OS1	Q8N1H7	587 aa		4.14	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	SLC25A45	Q8N413	288 aa		4.14	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	ZBTB34	Q8NCN2	500 aa		4.14	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	ZNF548	Q8NEK5	533 aa	Predicted RBP	4.14	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	IPMK	Q8NFU5	416 aa		4.14	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	SLC2A14	Q8TDB8	520 aa		4.14	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	CPT1B	Q92523	772 aa		4.14	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	FEM1C	Q96JP0	617 aa		4.14	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	ALPK1	Q96QP1	1244 aa		4.14	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	KCNK16	Q96T55	309 aa		4.14	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	CCDC3	Q9BQI4	270 aa		4.14	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	KLC2	Q9H0B6	622 aa		4.14	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	GPN2	Q9H9Y4	310 aa	Predicted RBP	4.14	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	CYP3A43	Q9HB55	503 aa		4.14	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	FAM49B	Q9NUQ9	324 aa		4.14	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	HELZ	P42694	1942 aa	Known RBP	4.14	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	PTPN13	Q12923	2485 aa		4.14	□□□□□ -1.75
ARHGEF12-208	ENST00000529970	SPTAN1	Q13813	2472 aa	Known RBP	4.14	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms