RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 MRM3Q9HC36 420 aaKnown RBP12.45□□□□□ -0.42
CCDC90B-216ENST00000529856 XAB2Q9HCS7 855 aaKnown RBP12.45□□□□□ -0.42
CCDC90B-216ENST00000529856 SYBUQ9NX95 663 aa12.45□□□□□ -0.42
CCDC90B-216ENST00000529856 ZNF624Q9P2J8 865 aaPredicted RBP12.45□□□□□ -0.42
CCDC90B-216ENST00000529856 CPNE7Q9UBL6 633 aa12.45□□□□□ -0.42
CCDC90B-216ENST00000529856 CEP295Q9C0D2 2601 aa12.44□□□□□ -0.42
CCDC90B-216ENST00000529856 C17orf113A0A1B0GUU1 675 aa12.44□□□□□ -0.42
CCDC90B-216ENST00000529856 SDR42E2A6NKP2 422 aa12.44□□□□□ -0.42
CCDC90B-216ENST00000529856 DNALI1O14645 258 aaPredicted RBP12.44□□□□□ -0.42
CCDC90B-216ENST00000529856 AP2A2O94973 939 aa12.44□□□□□ -0.42
CCDC90B-216ENST00000529856 PROS1P07225 676 aa12.44□□□□□ -0.42
CCDC90B-216ENST00000529856 NMBRP28336 390 aa12.44□□□□□ -0.42
CCDC90B-216ENST00000529856 CD1CP29017 333 aa12.44□□□□□ -0.42
CCDC90B-216ENST00000529856 PBLDP30039 288 aaPredicted RBP12.44□□□□□ -0.42
CCDC90B-216ENST00000529856 SLC19A1P41440 591 aa12.44□□□□□ -0.42
CCDC90B-216ENST00000529856 PRLHRP49683 370 aa12.44□□□□□ -0.42
CCDC90B-216ENST00000529856 DRG2P55039 364 aaKnown RBP12.44□□□□□ -0.42
CCDC90B-216ENST00000529856 UBE2IP63279 158 aaKnown RBP12.44□□□□□ -0.42
CCDC90B-216ENST00000529856 SQSTM1Q13501 440 aa12.44□□□□□ -0.42
CCDC90B-216ENST00000529856 NFE2L1Q14494 772 aa12.44□□□□□ -0.42
CCDC90B-216ENST00000529856 CLCA4Q14CN2 919 aa12.44□□□□□ -0.42
CCDC90B-216ENST00000529856 SEPT7Q16181 437 aaKnown RBP12.44□□□□□ -0.42
CCDC90B-216ENST00000529856 CLPPQ16740 277 aaPredicted RBP12.44□□□□□ -0.42
CCDC90B-216ENST00000529856 RNASEH2BQ5TBB1 312 aaKnown RBP12.44□□□□□ -0.42
CCDC90B-216ENST00000529856 XKR5Q6UX68 686 aa12.44□□□□□ -0.42
CCDC90B-216ENST00000529856 CERS6Q6ZMG9 384 aa12.44□□□□□ -0.42
CCDC90B-216ENST00000529856 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.44□□□□□ -0.42
CCDC90B-216ENST00000529856 SERPINB12Q96P63 405 aa12.44□□□□□ -0.42
CCDC90B-216ENST00000529856 TTC1Q99614 292 aa12.44□□□□□ -0.42
CCDC90B-216ENST00000529856 SLC38A3Q99624 504 aa12.44□□□□□ -0.42
CCDC90B-216ENST00000529856 CCM2Q9BSQ5 444 aa12.44□□□□□ -0.42
CCDC90B-216ENST00000529856 ASIC3Q9UHC3 531 aa12.44□□□□□ -0.42
CCDC90B-216ENST00000529856 ACSL5Q9ULC5 683 aa12.44□□□□□ -0.42
CCDC90B-216ENST00000529856 ATXN7L1Q9ULK2 861 aaPredicted RBP12.44□□□□□ -0.42
CCDC90B-216ENST00000529856 SOX13Q9UN79 622 aa12.44□□□□□ -0.42
CCDC90B-216ENST00000529856 WDR37Q9Y2I8 494 aa12.44□□□□□ -0.42
CCDC90B-216ENST00000529856 PCDHB1Q9Y5F3 818 aa12.44□□□□□ -0.42
CCDC90B-216ENST00000529856 ENTPD2Q9Y5L3 495 aa12.44□□□□□ -0.42
CCDC90B-216ENST00000529856 FRYQ5TBA9 3013 aa12.43□□□□□ -0.42
CCDC90B-216ENST00000529856 IGHV1OR21-1A0A087WYE8 117 aa12.43□□□□□ -0.42
CCDC90B-216ENST00000529856 MAGEB16A2A368 324 aa12.43□□□□□ -0.42
CCDC90B-216ENST00000529856 D6RAR5 112 aa12.43□□□□□ -0.42
CCDC90B-216ENST00000529856 TMX2-CTNND1H3BSU7 103 aa12.43□□□□□ -0.42
CCDC90B-216ENST00000529856 GOLGA8MH3BSY2 632 aa12.43□□□□□ -0.42
CCDC90B-216ENST00000529856 CPNE6O95741 557 aa12.43□□□□□ -0.42
CCDC90B-216ENST00000529856 IVDP26440 423 aa12.43□□□□□ -0.42
CCDC90B-216ENST00000529856 NSG1P42857 185 aa12.43□□□□□ -0.42
CCDC90B-216ENST00000529856 MAGEA3P43357 314 aa12.43□□□□□ -0.42
CCDC90B-216ENST00000529856 PDX1P52945 283 aa12.43□□□□□ -0.42
CCDC90B-216ENST00000529856 DR1Q01658 176 aa12.43□□□□□ -0.42
CCDC90B-216ENST00000529856 ZFP36L1Q07352 338 aaKnown RBP12.43□□□□□ -0.42
CCDC90B-216ENST00000529856 SEMA3AQ14563 771 aa12.43□□□□□ -0.42
CCDC90B-216ENST00000529856 RTP5Q14D33 572 aa12.43□□□□□ -0.42
CCDC90B-216ENST00000529856 AMZ1Q400G9 498 aa12.43□□□□□ -0.42
CCDC90B-216ENST00000529856 FASTKD1Q53R41 847 aaKnown RBP12.43□□□□□ -0.42
CCDC90B-216ENST00000529856 CES3Q6UWW8 571 aa12.43□□□□□ -0.42
CCDC90B-216ENST00000529856 PACS1Q6VY07 963 aa12.43□□□□□ -0.42
CCDC90B-216ENST00000529856 USP53Q70EK8 1073 aa12.43□□□□□ -0.42
CCDC90B-216ENST00000529856 PCGF5Q86SE9 256 aa12.43□□□□□ -0.42
CCDC90B-216ENST00000529856 PIM3Q86V86 326 aa12.43□□□□□ -0.42
CCDC90B-216ENST00000529856 ZNF761Q86XN6 746 aaPredicted RBP12.43□□□□□ -0.42
CCDC90B-216ENST00000529856 CFAP206Q8IYR0 622 aa12.43□□□□□ -0.42
CCDC90B-216ENST00000529856 MPP5Q8N3R9 675 aa12.43□□□□□ -0.42
CCDC90B-216ENST00000529856 CLDN19Q8N6F1 224 aa12.43□□□□□ -0.42
CCDC90B-216ENST00000529856 KDF1Q8NAX2 398 aaPredicted RBP12.43□□□□□ -0.42
CCDC90B-216ENST00000529856 MFSD3Q96ES6 412 aa12.43□□□□□ -0.42
CCDC90B-216ENST00000529856 ATXN7L3BQ96GX2 97 aa12.43□□□□□ -0.42
CCDC90B-216ENST00000529856 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.43□□□□□ -0.42
CCDC90B-216ENST00000529856 STN1Q9H668 368 aaKnown RBP12.43□□□□□ -0.42
CCDC90B-216ENST00000529856 UCK1Q9HA47 277 aa12.43□□□□□ -0.42
CCDC90B-216ENST00000529856 KCNK4Q9NYG8 393 aa12.43□□□□□ -0.42
CCDC90B-216ENST00000529856 PRSS21Q9Y6M0 314 aa12.43□□□□□ -0.42
CCDC90B-216ENST00000529856 PIKFYVEQ9Y2I7 2098 aa12.42□□□□□ -0.42
CCDC90B-216ENST00000529856 FAM237BA0A1B0GVD1 139 aa12.42□□□□□ -0.42
CCDC90B-216ENST00000529856 TMEM8BA6NDV4 472 aa12.42□□□□□ -0.42
CCDC90B-216ENST00000529856 OR52A4PA6NMU1 304 aa12.42□□□□□ -0.42
CCDC90B-216ENST00000529856 CD3EAPO15446 510 aaKnown RBP12.42□□□□□ -0.42
CCDC90B-216ENST00000529856 OR1I1O60431 355 aa12.42□□□□□ -0.42
CCDC90B-216ENST00000529856 VIPP01282 170 aa12.42□□□□□ -0.42
CCDC90B-216ENST00000529856 GSTM1P09488 218 aa12.42□□□□□ -0.42
CCDC90B-216ENST00000529856 ARNTP27540 789 aa12.42□□□□□ -0.42
CCDC90B-216ENST00000529856 CCKBRP32239 447 aa12.42□□□□□ -0.42
CCDC90B-216ENST00000529856 PPARGP37231 505 aaPredicted RBP12.42□□□□□ -0.42
CCDC90B-216ENST00000529856 HALP42357 657 aa12.42□□□□□ -0.42
CCDC90B-216ENST00000529856 EPHA4P54764 986 aa12.42□□□□□ -0.42
CCDC90B-216ENST00000529856 GPLD1P80108 840 aa12.42□□□□□ -0.42
CCDC90B-216ENST00000529856 GSTM4Q03013 218 aa12.42□□□□□ -0.42
CCDC90B-216ENST00000529856 CFHR1Q03591 330 aa12.42□□□□□ -0.42
CCDC90B-216ENST00000529856 CYP4F3Q08477 520 aa12.42□□□□□ -0.42
CCDC90B-216ENST00000529856 DHX34Q14147 1143 aaKnown RBP12.42□□□□□ -0.42
CCDC90B-216ENST00000529856 RPE65Q16518 533 aa12.42□□□□□ -0.42
CCDC90B-216ENST00000529856 ZNF658BQ4V348 819 aaPredicted RBP12.42□□□□□ -0.42
CCDC90B-216ENST00000529856 AARS2Q5JTZ9 985 aaKnown RBP12.42□□□□□ -0.42
CCDC90B-216ENST00000529856 NKAIN2Q5VXU1 208 aa12.42□□□□□ -0.42
CCDC90B-216ENST00000529856 CASC4Q6P4E1 433 aa12.42□□□□□ -0.42
CCDC90B-216ENST00000529856 TMEM26Q6ZUK4 368 aa12.42□□□□□ -0.42
CCDC90B-216ENST00000529856 TMPRSS9Q7Z410 1059 aa12.42□□□□□ -0.42
CCDC90B-216ENST00000529856 B3GNT8Q7Z7M8 397 aa12.42□□□□□ -0.42
CCDC90B-216ENST00000529856 HOOK3Q86VS8 718 aa12.42□□□□□ -0.42
CCDC90B-216ENST00000529856 JAMLQ86YT9 394 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms