RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 GALTP07902 379 aa4.85□□□□□ -1.63
CSDE1-212ENST00000529046 LINC00271P0C7V0 271 aa4.85□□□□□ -1.63
CSDE1-212ENST00000529046 SRD5A1P18405 259 aa4.85□□□□□ -1.63
CSDE1-212ENST00000529046 ITGAXP20702 1163 aa4.85□□□□□ -1.63
CSDE1-212ENST00000529046 THPOP40225 353 aa4.85□□□□□ -1.63
CSDE1-212ENST00000529046 RXRGP48443 463 aa4.85□□□□□ -1.63
CSDE1-212ENST00000529046 SLC26A2P50443 739 aa4.85□□□□□ -1.63
CSDE1-212ENST00000529046 MGAT3Q09327 533 aa4.85□□□□□ -1.63
CSDE1-212ENST00000529046 TDGQ13569 410 aa4.85□□□□□ -1.63
CSDE1-212ENST00000529046 NECTIN1Q15223 517 aa4.85□□□□□ -1.63
CSDE1-212ENST00000529046 SLC9B1Q4ZJI4 515 aa4.85□□□□□ -1.63
CSDE1-212ENST00000529046 EPC2Q52LR7 807 aa4.85□□□□□ -1.63
CSDE1-212ENST00000529046 WASHC2DQ5SRD0 308 aa4.85□□□□□ -1.63
CSDE1-212ENST00000529046 CASC1Q6TDU7 716 aa4.85□□□□□ -1.63
CSDE1-212ENST00000529046 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.85□□□□□ -1.638e-10■■□□□ 12.5
CSDE1-212ENST00000529046 MOB3CQ70IA8 216 aa4.85□□□□□ -1.63
CSDE1-212ENST00000529046 NIPA1Q7RTP0 329 aa4.85□□□□□ -1.63
CSDE1-212ENST00000529046 PLPPR4Q7Z2D5 763 aa4.85□□□□□ -1.63
CSDE1-212ENST00000529046 PATL1Q86TB9 770 aaKnown RBP4.85□□□□□ -1.63
CSDE1-212ENST00000529046 TADA2BQ86TJ2 420 aa4.85□□□□□ -1.63
CSDE1-212ENST00000529046 DENND6AQ8IWF6 608 aa4.85□□□□□ -1.63
CSDE1-212ENST00000529046 PELI3Q8N2H9 469 aa4.85□□□□□ -1.63
CSDE1-212ENST00000529046 FBXL16Q8N461 479 aa4.85□□□□□ -1.63
CSDE1-212ENST00000529046 SRBD1Q8N5C6 995 aaKnown RBP4.85□□□□□ -1.63
CSDE1-212ENST00000529046 ZNF713Q8N859 430 aaPredicted RBP4.85□□□□□ -1.63
CSDE1-212ENST00000529046 CLEC18CQ8NCF0 446 aa4.85□□□□□ -1.63
CSDE1-212ENST00000529046 NOC3LQ8WTT2 800 aaKnown RBP4.85□□□□□ -1.63
CSDE1-212ENST00000529046 ATOH1Q92858 354 aaPredicted RBP4.85□□□□□ -1.63
CSDE1-212ENST00000529046 P2RX5Q93086 422 aa4.85□□□□□ -1.63
CSDE1-212ENST00000529046 TMEM18Q96B42 140 aa4.85□□□□□ -1.63
CSDE1-212ENST00000529046 RNF183Q96D59 192 aa4.85□□□□□ -1.63
CSDE1-212ENST00000529046 CAMK1GQ96NX5 476 aa4.85□□□□□ -1.63
CSDE1-212ENST00000529046 FTHL17Q9BXU8 183 aa4.85□□□□□ -1.63
CSDE1-212ENST00000529046 IFIH1Q9BYX4 1025 aaKnown RBP4.85□□□□□ -1.63
CSDE1-212ENST00000529046 GLT8D2Q9H1C3 349 aa4.85□□□□□ -1.63
CSDE1-212ENST00000529046 SMARCAD1Q9H4L7 1026 aa4.85□□□□□ -1.63
CSDE1-212ENST00000529046 PLEKHA4Q9H4M7 779 aa4.85□□□□□ -1.63
CSDE1-212ENST00000529046 UBE2ZQ9H832 354 aaPredicted RBP4.85□□□□□ -1.63
CSDE1-212ENST00000529046 PSTPIP2Q9H939 334 aa4.85□□□□□ -1.63
CSDE1-212ENST00000529046 PLAC1Q9HBJ0 212 aa4.85□□□□□ -1.63
CSDE1-212ENST00000529046 KRCC1Q9NPI7 259 aaPredicted RBP4.85□□□□□ -1.63
CSDE1-212ENST00000529046 TAS2R10Q9NYW0 307 aa4.85□□□□□ -1.63
CSDE1-212ENST00000529046 NCKIPSDQ9NZQ3 722 aa4.85□□□□□ -1.63
CSDE1-212ENST00000529046 SEC63Q9UGP8 760 aaKnown RBP4.85□□□□□ -1.63
CSDE1-212ENST00000529046 UBIAD1Q9Y5Z9 338 aa4.85□□□□□ -1.63
CSDE1-212ENST00000529046 NFASCO94856 1347 aa4.85□□□□□ -1.63
CSDE1-212ENST00000529046 GBF1Q92538 1859 aa4.85□□□□□ -1.63
CSDE1-212ENST00000529046 TET1Q8NFU7 2136 aa4.85□□□□□ -1.63
CSDE1-212ENST00000529046 SCN5AQ14524 2016 aa4.84□□□□□ -1.63
CSDE1-212ENST00000529046 IGKV6D-21A0A0A0MT36 114 aa4.84□□□□□ -1.63
CSDE1-212ENST00000529046 GSTTP1A0A1W2PQM5 241 aa4.84□□□□□ -1.63
CSDE1-212ENST00000529046 FSD2A1L4K1 749 aa4.84□□□□□ -1.63
CSDE1-212ENST00000529046 SH2B2O14492 632 aaPredicted RBP4.84□□□□□ -1.63
CSDE1-212ENST00000529046 KLK8O60259 260 aa4.84□□□□□ -1.63
CSDE1-212ENST00000529046 CHRNA1P02708 482 aa4.84□□□□□ -1.63
CSDE1-212ENST00000529046 ZNF8P17098 575 aaPredicted RBP4.84□□□□□ -1.63
CSDE1-212ENST00000529046 FMO4P31512 558 aa4.84□□□□□ -1.63
CSDE1-212ENST00000529046 ABCD1P33897 745 aa4.84□□□□□ -1.63
CSDE1-212ENST00000529046 TCF7P36402 384 aaPredicted RBP4.84□□□□□ -1.63
CSDE1-212ENST00000529046 CDH12P55289 794 aa4.84□□□□□ -1.63
CSDE1-212ENST00000529046 P2RX3P56373 397 aa4.84□□□□□ -1.63
CSDE1-212ENST00000529046 CLDN2P57739 230 aa4.84□□□□□ -1.63
CSDE1-212ENST00000529046 NANOS2P60321 138 aaKnown RBP4.84□□□□□ -1.63
CSDE1-212ENST00000529046 LPIN1Q14693 890 aa4.84□□□□□ -1.63
CSDE1-212ENST00000529046 ZNF284Q2VY69 593 aa4.84□□□□□ -1.63
CSDE1-212ENST00000529046 EDRF1Q3B7T1 1238 aa4.84□□□□□ -1.63
CSDE1-212ENST00000529046 TMEM31Q5JXX7 168 aa4.84□□□□□ -1.63
CSDE1-212ENST00000529046 MARCH8Q5T0T0 291 aa4.84□□□□□ -1.63
CSDE1-212ENST00000529046 DCAF12L2Q5VW00 463 aa4.84□□□□□ -1.63
CSDE1-212ENST00000529046 MYOCDQ8IZQ8 938 aa4.84□□□□□ -1.63
CSDE1-212ENST00000529046 C7orf57Q8NEG2 295 aa4.84□□□□□ -1.63
CSDE1-212ENST00000529046 ADAMTS15Q8TE58 950 aa4.84□□□□□ -1.63
CSDE1-212ENST00000529046 SLC35F5Q8WV83 523 aa4.84□□□□□ -1.63
CSDE1-212ENST00000529046 PABPC5Q96DU9 382 aaKnown RBP4.84□□□□□ -1.63
CSDE1-212ENST00000529046 LSG1Q9H089 658 aaKnown RBP4.84□□□□□ -1.63
CSDE1-212ENST00000529046 CDT1Q9H211 546 aa4.84□□□□□ -1.63
CSDE1-212ENST00000529046 SETD4Q9NVD3 440 aa4.84□□□□□ -1.63
CSDE1-212ENST00000529046 RBM28Q9NW13 759 aaKnown RBP4.84□□□□□ -1.63
CSDE1-212ENST00000529046 TRIP12Q14669 1992 aaPredicted RBP4.84□□□□□ -1.64
CSDE1-212ENST00000529046 NCOR1O75376 2440 aa4.83□□□□□ -1.64
CSDE1-212ENST00000529046 PRRC2BQ5JSZ5 2229 aaKnown RBP4.83□□□□□ -1.64
CSDE1-212ENST00000529046 CCDC69A6NI79 296 aa4.83□□□□□ -1.64
CSDE1-212ENST00000529046 TGFB1I1O43294 461 aa4.83□□□□□ -1.64
CSDE1-212ENST00000529046 SPRY3O43610 288 aa4.83□□□□□ -1.64
CSDE1-212ENST00000529046 ATP9AO75110 1047 aa4.83□□□□□ -1.64
CSDE1-212ENST00000529046 TACC1O75410 805 aa4.83□□□□□ -1.64
CSDE1-212ENST00000529046 TBX18O95935 607 aa4.83□□□□□ -1.64
CSDE1-212ENST00000529046 HOXB5P09067 269 aa4.83□□□□□ -1.64
CSDE1-212ENST00000529046 CBSLP0DN79 551 aa4.83□□□□□ -1.64
CSDE1-212ENST00000529046 MYF6P23409 242 aa4.83□□□□□ -1.64
CSDE1-212ENST00000529046 RFC1P35251 1148 aaPredicted RBP4.83□□□□□ -1.64
CSDE1-212ENST00000529046 CBSP35520 551 aa4.83□□□□□ -1.64
CSDE1-212ENST00000529046 PAFAH1B1P43034 410 aa4.83□□□□□ -1.64
CSDE1-212ENST00000529046 GABRB2P47870 512 aa4.83□□□□□ -1.64
CSDE1-212ENST00000529046 ST3GAL1Q11201 340 aa4.83□□□□□ -1.64
CSDE1-212ENST00000529046 GPM6BQ13491 265 aa4.83□□□□□ -1.64
CSDE1-212ENST00000529046 RNPS1Q15287 305 aaKnown RBP4.83□□□□□ -1.64
CSDE1-212ENST00000529046 TAF11Q15544 211 aa4.83□□□□□ -1.64
CSDE1-212ENST00000529046 KLHL22Q53GT1 634 aa4.83□□□□□ -1.64
CSDE1-212ENST00000529046 FAM69AQ5T7M9 428 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms