RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 CYP17A1P05093 508 aa14.56□□□□□ -0.08
ECHDC1-220ENST00000528402 C1SP09871 688 aa14.56□□□□□ -0.08
ECHDC1-220ENST00000528402 MPC1LP0DKB6 136 aa14.56□□□□□ -0.08
ECHDC1-220ENST00000528402 SYN1P17600 705 aa14.56□□□□□ -0.08
ECHDC1-220ENST00000528402 TSPAN8P19075 237 aa14.56□□□□□ -0.08
ECHDC1-220ENST00000528402 MSH3P20585 1137 aa14.56□□□□□ -0.08
ECHDC1-220ENST00000528402 LHCGRP22888 699 aa14.56□□□□□ -0.08
ECHDC1-220ENST00000528402 EIF4HQ15056 248 aaKnown RBP14.56□□□□□ -0.08
ECHDC1-220ENST00000528402 RPS6KA2Q15349 733 aa14.56□□□□□ -0.08
ECHDC1-220ENST00000528402 SMU1Q2TAY7 513 aa14.56□□□□□ -0.08
ECHDC1-220ENST00000528402 EML3Q32P44 896 aa14.56□□□□□ -0.08
ECHDC1-220ENST00000528402 SPATS1Q496A3 300 aa14.56□□□□□ -0.08
ECHDC1-220ENST00000528402 COQ5Q5HYK3 327 aa14.56□□□□□ -0.08
ECHDC1-220ENST00000528402 PLEKHS1Q5SXH7 462 aa14.56□□□□□ -0.08
ECHDC1-220ENST00000528402 TMEM215Q68D42 235 aa14.56□□□□□ -0.08
ECHDC1-220ENST00000528402 CYHR1Q6ZMK1 362 aa14.56□□□□□ -0.08
ECHDC1-220ENST00000528402 NEK10Q6ZWH5 1172 aa14.56□□□□□ -0.08
ECHDC1-220ENST00000528402 NRSN1Q8IZ57 195 aa14.56□□□□□ -0.08
ECHDC1-220ENST00000528402 MIER2Q8N344 545 aa14.56□□□□□ -0.08
ECHDC1-220ENST00000528402 TRAM1L1Q8N609 369 aa14.56□□□□□ -0.08
ECHDC1-220ENST00000528402 CHST14Q8NCH0 376 aa14.56□□□□□ -0.08
ECHDC1-220ENST00000528402 BPIFB1Q8TDL5 484 aa14.56□□□□□ -0.08
ECHDC1-220ENST00000528402 TUBGCP3Q96CW5 907 aa14.56□□□□□ -0.08
ECHDC1-220ENST00000528402 NSUN5Q96P11 429 aaKnown RBP14.56□□□□□ -0.08
ECHDC1-220ENST00000528402 CDRT15Q96T59 188 aa14.56□□□□□ -0.08
ECHDC1-220ENST00000528402 VCX3BQ9H321 246 aa14.56□□□□□ -0.08
ECHDC1-220ENST00000528402 S100A14Q9HCY8 104 aa14.56□□□□□ -0.08
ECHDC1-220ENST00000528402 DZANK1Q9NVP4 752 aa14.56□□□□□ -0.08
ECHDC1-220ENST00000528402 THG1LQ9NWX6 298 aaKnown RBP14.56□□□□□ -0.08
ECHDC1-220ENST00000528402 PRSS21Q9Y6M0 314 aa14.56□□□□□ -0.08
ECHDC1-220ENST00000528402 WASF2Q9Y6W5 498 aa14.56□□□□□ -0.08
ECHDC1-220ENST00000528402 BRCA2P51587 3418 aa14.55□□□□□ -0.08
ECHDC1-220ENST00000528402 DYTNA2CJ06 578 aa14.55□□□□□ -0.08
ECHDC1-220ENST00000528402 LRRC14BA6NHZ5 514 aa14.55□□□□□ -0.08
ECHDC1-220ENST00000528402 NCF1BA6NI72 391 aaPredicted RBP14.55□□□□□ -0.08
ECHDC1-220ENST00000528402 NCF1CA8MVU1 366 aaPredicted RBP14.55□□□□□ -0.08
ECHDC1-220ENST00000528402 PER2O15055 1255 aa14.55□□□□□ -0.08
ECHDC1-220ENST00000528402 NRP2O60462 931 aa14.55□□□□□ -0.08
ECHDC1-220ENST00000528402 TBX10O75333 385 aa14.55□□□□□ -0.08
ECHDC1-220ENST00000528402 LEFTY1O75610 366 aa14.55□□□□□ -0.08
ECHDC1-220ENST00000528402 ARHGEF15O94989 841 aa14.55□□□□□ -0.08
ECHDC1-220ENST00000528402 CSPG5O95196 566 aa14.55□□□□□ -0.08
ECHDC1-220ENST00000528402 PRNPP04156 253 aa14.55□□□□□ -0.08
ECHDC1-220ENST00000528402 C8GP07360 202 aa14.55□□□□□ -0.08
ECHDC1-220ENST00000528402 PRR35P0CG20 571 aa14.55□□□□□ -0.08
ECHDC1-220ENST00000528402 ATP1B2P14415 290 aaPredicted RBP14.55□□□□□ -0.08
ECHDC1-220ENST00000528402 NCF1P14598 390 aaPredicted RBP14.55□□□□□ -0.08
ECHDC1-220ENST00000528402 TIMP2P16035 220 aa14.55□□□□□ -0.08
ECHDC1-220ENST00000528402 GPX3P22352 226 aa14.55□□□□□ -0.08
ECHDC1-220ENST00000528402 ME2P23368 584 aa14.55□□□□□ -0.08
ECHDC1-220ENST00000528402 PDGFRLQ15198 375 aa14.55□□□□□ -0.08
ECHDC1-220ENST00000528402 PPP1R3AQ16821 1122 aa14.55□□□□□ -0.08
ECHDC1-220ENST00000528402 DUSP6Q16828 381 aa14.55□□□□□ -0.08
ECHDC1-220ENST00000528402 ATP13A5Q4VNC0 1218 aa14.55□□□□□ -0.08
ECHDC1-220ENST00000528402 ARSIQ5FYB1 569 aa14.55□□□□□ -0.08
ECHDC1-220ENST00000528402 PIGGQ5H8A4 983 aa14.55□□□□□ -0.08
ECHDC1-220ENST00000528402 ERAP2Q6P179 960 aa14.55□□□□□ -0.08
ECHDC1-220ENST00000528402 ZFP1Q6P2D0 407 aa14.55□□□□□ -0.08
ECHDC1-220ENST00000528402 PRMT9Q6P2P2 845 aa14.55□□□□□ -0.08
ECHDC1-220ENST00000528402 DPPA4Q7L190 304 aa14.55□□□□□ -0.08
ECHDC1-220ENST00000528402 SYVN1Q86TM6 617 aa14.55□□□□□ -0.08
ECHDC1-220ENST00000528402 PHYKPLQ8IUZ5 450 aa14.55□□□□□ -0.08
ECHDC1-220ENST00000528402 NAT16Q8N8M0 369 aa14.55□□□□□ -0.08
ECHDC1-220ENST00000528402 C3orf30Q96M34 536 aa14.55□□□□□ -0.08
ECHDC1-220ENST00000528402 ZSCAN5AQ9BUG6 496 aa14.55□□□□□ -0.08
ECHDC1-220ENST00000528402 TRPV4Q9HBA0 871 aa14.55□□□□□ -0.08
ECHDC1-220ENST00000528402 SDR39U1Q9NRG7 319 aaPredicted RBP14.55□□□□□ -0.08
ECHDC1-220ENST00000528402 GDE1Q9NZC3 331 aa14.55□□□□□ -0.08
ECHDC1-220ENST00000528402 PIKFYVEQ9Y2I7 2098 aa14.55□□□□□ -0.08
ECHDC1-220ENST00000528402 PLXNB3Q9ULL4 1909 aa14.54□□□□□ -0.08
ECHDC1-220ENST00000528402 PABPN1LA6NDY0 278 aaKnown RBP14.54□□□□□ -0.08
ECHDC1-220ENST00000528402 TTC34A8MYJ7 566 aa14.54□□□□□ -0.08
ECHDC1-220ENST00000528402 WDR47O94967 919 aa14.54□□□□□ -0.08
ECHDC1-220ENST00000528402 ANXA5P08758 320 aa14.54□□□□□ -0.08
ECHDC1-220ENST00000528402 ANPEPP15144 967 aa14.54□□□□□ -0.08
ECHDC1-220ENST00000528402 AOAHP28039 575 aa14.54□□□□□ -0.08
ECHDC1-220ENST00000528402 MAPK9P45984 424 aa14.54□□□□□ -0.08
ECHDC1-220ENST00000528402 SP140Q13342 867 aa14.54□□□□□ -0.08
ECHDC1-220ENST00000528402 GTF2H2Q13888 395 aa14.54□□□□□ -0.08
ECHDC1-220ENST00000528402 LRP8Q14114 963 aa14.54□□□□□ -0.08
ECHDC1-220ENST00000528402 CBX2Q14781 532 aaPredicted RBP14.54□□□□□ -0.08
ECHDC1-220ENST00000528402 XKR7Q5GH72 579 aa14.54□□□□□ -0.08
ECHDC1-220ENST00000528402 LDLRAP1Q5SW96 308 aa14.54□□□□□ -0.08
ECHDC1-220ENST00000528402 ZNF697Q5TEC3 545 aa14.54□□□□□ -0.08
ECHDC1-220ENST00000528402 GTF2H2CQ6P1K8 395 aa14.54□□□□□ -0.08
ECHDC1-220ENST00000528402 LRRC74BQ6ZQY2 392 aa14.54□□□□□ -0.08
ECHDC1-220ENST00000528402 CLDN19Q8N6F1 224 aa14.54□□□□□ -0.08
ECHDC1-220ENST00000528402 TMIEQ8NEW7 156 aa14.54□□□□□ -0.08
ECHDC1-220ENST00000528402 ITFG1Q8TB96 612 aa14.54□□□□□ -0.08
ECHDC1-220ENST00000528402 ING5Q8WYH8 240 aa14.54□□□□□ -0.08
ECHDC1-220ENST00000528402 DLG3Q92796 817 aa14.54□□□□□ -0.08
ECHDC1-220ENST00000528402 SMARCD2Q92925 531 aa14.54□□□□□ -0.08
ECHDC1-220ENST00000528402 ATP6V1E2Q96A05 226 aa14.54□□□□□ -0.08
ECHDC1-220ENST00000528402 MAGEB10Q96LZ2 347 aaPredicted RBP14.54□□□□□ -0.08
ECHDC1-220ENST00000528402 HOPXQ9BPY8 73 aaPredicted RBP14.54□□□□□ -0.08
ECHDC1-220ENST00000528402 SPATA16Q9BXB7 569 aa14.54□□□□□ -0.08
ECHDC1-220ENST00000528402 CD244Q9BZW8 370 aa14.54□□□□□ -0.08
ECHDC1-220ENST00000528402 TUBB1Q9H4B7 451 aa14.54□□□□□ -0.08
ECHDC1-220ENST00000528402 GID8Q9NWU2 228 aa14.54□□□□□ -0.08
ECHDC1-220ENST00000528402 ELOVL2Q9NXB9 296 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms