RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 TOX3O15405 576 aaPredicted RBP15.22■□□□□ 0.03
CLNS1A-210ENST00000528364 KATNA1O75449 491 aa15.22■□□□□ 0.03
CLNS1A-210ENST00000528364 SPAG6O75602 509 aa15.22■□□□□ 0.03
CLNS1A-210ENST00000528364 NDUFA10O95299 355 aa15.22■□□□□ 0.03
CLNS1A-210ENST00000528364 TIAF1O95411 115 aa15.22■□□□□ 0.03
CLNS1A-210ENST00000528364 EPOP01588 193 aa15.22■□□□□ 0.03
CLNS1A-210ENST00000528364 PBLDP30039 288 aaPredicted RBP15.22■□□□□ 0.03
CLNS1A-210ENST00000528364 SPAM1P38567 509 aa15.22■□□□□ 0.03
CLNS1A-210ENST00000528364 CAPZBP47756 277 aa15.22■□□□□ 0.03
CLNS1A-210ENST00000528364 TBX2Q13207 712 aaPredicted RBP15.22■□□□□ 0.03
CLNS1A-210ENST00000528364 OLIG2Q13516 323 aa15.22■□□□□ 0.03
CLNS1A-210ENST00000528364 ERV3-1Q14264 604 aa15.22■□□□□ 0.03
CLNS1A-210ENST00000528364 NFE2L1Q14494 772 aa15.22■□□□□ 0.03
CLNS1A-210ENST00000528364 KCNAB1Q14722 419 aa15.22■□□□□ 0.03
CLNS1A-210ENST00000528364 SLC1A5Q15758 541 aa15.22■□□□□ 0.03
CLNS1A-210ENST00000528364 PPP2R5EQ16537 467 aa15.22■□□□□ 0.03
CLNS1A-210ENST00000528364 GPRC6AQ5T6X5 926 aa15.22■□□□□ 0.03
CLNS1A-210ENST00000528364 PRSS42Q7Z5A4 293 aa15.22■□□□□ 0.03
CLNS1A-210ENST00000528364 TMEM135Q86UB9 458 aa15.22■□□□□ 0.03
CLNS1A-210ENST00000528364 AMZ2Q86W34 360 aa15.22■□□□□ 0.03
CLNS1A-210ENST00000528364 BEND7Q8N7W2 519 aaPredicted RBP15.22■□□□□ 0.03
CLNS1A-210ENST00000528364 C9orf43Q8TAL5 461 aaPredicted RBP15.22■□□□□ 0.03
CLNS1A-210ENST00000528364 BRSK1Q8TDC3 778 aa15.22■□□□□ 0.03
CLNS1A-210ENST00000528364 APOBEC4Q8WW27 367 aaKnown RBP15.22■□□□□ 0.03
CLNS1A-210ENST00000528364 KRT35Q92764 455 aa15.22■□□□□ 0.03
CLNS1A-210ENST00000528364 P3H4Q92791 437 aa15.22■□□□□ 0.03
CLNS1A-210ENST00000528364 EPN3Q9H201 632 aa15.22■□□□□ 0.03
CLNS1A-210ENST00000528364 TRABDQ9H4I3 376 aa15.22■□□□□ 0.03
CLNS1A-210ENST00000528364 AKIRIN1Q9H9L7 192 aaPredicted RBP15.22■□□□□ 0.03
CLNS1A-210ENST00000528364 TUBD1Q9UJT1 453 aa15.22■□□□□ 0.03
CLNS1A-210ENST00000528364 CFAP20Q9Y6A4 193 aaKnown RBP15.22■□□□□ 0.03
CLNS1A-210ENST00000528364 SPTBP11277 2137 aa15.22■□□□□ 0.03
CLNS1A-210ENST00000528364 PTPN13Q12923 2485 aa15.21■□□□□ 0.03
CLNS1A-210ENST00000528364 ZNF106Q9H2Y7 1883 aaKnown RBP15.21■□□□□ 0.03
CLNS1A-210ENST00000528364 GLYATL1P3A0A0U1RQE8 302 aa15.21■□□□□ 0.03
CLNS1A-210ENST00000528364 AKR1B15C9JRZ8 316 aaPredicted RBP15.21■□□□□ 0.03
CLNS1A-210ENST00000528364 PSTPIP1O43586 416 aa15.21■□□□□ 0.03
CLNS1A-210ENST00000528364 ZRANB2O95218 330 aaKnown RBP eCLIP15.21■□□□□ 0.03
CLNS1A-210ENST00000528364 FGF5P12034 268 aa15.21■□□□□ 0.03
CLNS1A-210ENST00000528364 FOLR1P15328 257 aa15.21■□□□□ 0.03
CLNS1A-210ENST00000528364 VCLP18206 1134 aa15.21■□□□□ 0.03
CLNS1A-210ENST00000528364 NR1D1P20393 614 aa15.21■□□□□ 0.03
CLNS1A-210ENST00000528364 MAP7Q14244 749 aa15.21■□□□□ 0.03
CLNS1A-210ENST00000528364 TFDP3Q5H9I0 405 aa15.21■□□□□ 0.03
CLNS1A-210ENST00000528364 MICALCLQ6ZW33 695 aa15.21■□□□□ 0.03
CLNS1A-210ENST00000528364 DET1Q7L5Y6 550 aa15.21■□□□□ 0.03
CLNS1A-210ENST00000528364 GLT6D1Q7Z4J2 308 aa15.21■□□□□ 0.03
CLNS1A-210ENST00000528364 RCOR2Q8IZ40 523 aa15.21■□□□□ 0.03
CLNS1A-210ENST00000528364 ZDHHC12Q96GR4 267 aa15.21■□□□□ 0.03
CLNS1A-210ENST00000528364 INSM2Q96T92 566 aaPredicted RBP15.21■□□□□ 0.03
CLNS1A-210ENST00000528364 APOL2Q9BQE5 337 aa15.21■□□□□ 0.03
CLNS1A-210ENST00000528364 GORASP1Q9BQQ3 440 aa15.21■□□□□ 0.03
CLNS1A-210ENST00000528364 TSPY26PQ9H489 355 aa15.21■□□□□ 0.03
CLNS1A-210ENST00000528364 EPHA6Q9UF33 1036 aa15.21■□□□□ 0.03
CLNS1A-210ENST00000528364 LNPEPQ9UIQ6 1025 aa15.21■□□□□ 0.03
CLNS1A-210ENST00000528364 MTSS1O43312 755 aa15.2■□□□□ 0.02
CLNS1A-210ENST00000528364 NELFEP18615 380 aaKnown RBP15.2■□□□□ 0.02
CLNS1A-210ENST00000528364 FECHP22830 423 aa15.2■□□□□ 0.02
CLNS1A-210ENST00000528364 RBL1P28749 1068 aa15.2■□□□□ 0.02
CLNS1A-210ENST00000528364 HALP42357 657 aa15.2■□□□□ 0.02
CLNS1A-210ENST00000528364 MC1RQ01726 317 aa15.2■□□□□ 0.02
CLNS1A-210ENST00000528364 IL11RAQ14626 422 aa15.2■□□□□ 0.02
CLNS1A-210ENST00000528364 LDLRAP1Q5SW96 308 aa15.2■□□□□ 0.02
CLNS1A-210ENST00000528364 FNBP1LQ5T0N5 605 aa15.2■□□□□ 0.02
CLNS1A-210ENST00000528364 DUS1LQ6P1R4 473 aaKnown RBP15.2■□□□□ 0.02
CLNS1A-210ENST00000528364 CCDC50Q8IVM0 306 aa15.2■□□□□ 0.02
CLNS1A-210ENST00000528364 RBM12BQ8IXT5 1001 aaKnown RBP15.2■□□□□ 0.02
CLNS1A-210ENST00000528364 KATNAL2Q8IYT4 538 aa15.2■□□□□ 0.02
CLNS1A-210ENST00000528364 DDHD1Q8NEL9 900 aa15.2■□□□□ 0.02
CLNS1A-210ENST00000528364 ZNF398Q8TD17 642 aa15.2■□□□□ 0.02
CLNS1A-210ENST00000528364 DTX3LQ8TDB6 740 aa15.2■□□□□ 0.02
CLNS1A-210ENST00000528364 STAMBPL1Q96FJ0 436 aa15.2■□□□□ 0.02
CLNS1A-210ENST00000528364 QKIQ96PU8 341 aaKnown RBP eCLIP15.2■□□□□ 0.02
CLNS1A-210ENST00000528364 RUFY1Q96T51 708 aa15.2■□□□□ 0.02
CLNS1A-210ENST00000528364 MAP3K3Q99759 626 aa15.2■□□□□ 0.02
CLNS1A-210ENST00000528364 FICDQ9BVA6 458 aa15.2■□□□□ 0.02
CLNS1A-210ENST00000528364 HACD3Q9P035 362 aa15.2■□□□□ 0.02
CLNS1A-210ENST00000528364 FAM8A1Q9UBU6 413 aa15.2■□□□□ 0.02
CLNS1A-210ENST00000528364 RSPH14Q9UHP6 348 aa15.2■□□□□ 0.02
CLNS1A-210ENST00000528364 ARL5AQ9Y689 179 aa15.2■□□□□ 0.02
CLNS1A-210ENST00000528364 KCNMB2Q9Y691 235 aa15.2■□□□□ 0.02
CLNS1A-210ENST00000528364 UBR5O95071 2799 aaPredicted RBP15.19■□□□□ 0.02
CLNS1A-210ENST00000528364 CDC14CA4D256 554 aa15.19■□□□□ 0.02
CLNS1A-210ENST00000528364 H7C0C1 242 aa15.19■□□□□ 0.02
CLNS1A-210ENST00000528364 STX7O15400 261 aaKnown RBP15.19■□□□□ 0.02
CLNS1A-210ENST00000528364 KCNJ13O60928 360 aa15.19■□□□□ 0.02
CLNS1A-210ENST00000528364 HLA-DPA1P20036 260 aa15.19■□□□□ 0.02
CLNS1A-210ENST00000528364 ATP5OP48047 213 aa15.19■□□□□ 0.02
CLNS1A-210ENST00000528364 HADHBP55084 474 aaKnown RBP15.19■□□□□ 0.02
CLNS1A-210ENST00000528364 DMPKQ09013 629 aa15.19■□□□□ 0.02
CLNS1A-210ENST00000528364 MPP3Q13368 585 aa15.19■□□□□ 0.02
CLNS1A-210ENST00000528364 METRNLQ641Q3 311 aa15.19■□□□□ 0.02
CLNS1A-210ENST00000528364 PWWP2BQ6NUJ5 590 aa15.19■□□□□ 0.02
CLNS1A-210ENST00000528364 FAM199XQ6PEV8 388 aaPredicted RBP15.19■□□□□ 0.02
CLNS1A-210ENST00000528364 FBXO38Q6PIJ6 1188 aa15.19■□□□□ 0.02
CLNS1A-210ENST00000528364 PPP1R3BQ86XI6 285 aa15.19■□□□□ 0.02
CLNS1A-210ENST00000528364 CNGA4Q8IV77 575 aa15.19■□□□□ 0.02
CLNS1A-210ENST00000528364 TC2NQ8N9U0 490 aa15.19■□□□□ 0.02
CLNS1A-210ENST00000528364 SPDYE1Q8NFV5 336 aaPredicted RBP15.19■□□□□ 0.02
CLNS1A-210ENST00000528364 CT55Q8WUE5 264 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms