RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 RPS6KA6Q9UK32 745 aa5.76□□□□□ -1.49
PCF11-202ENST00000528336 KCNS2Q9ULS6 477 aa5.76□□□□□ -1.49
PCF11-202ENST00000528336 TNRQ92752 1358 aa5.76□□□□□ -1.49
PCF11-202ENST00000528336 CEP152O94986 1710 aa5.76□□□□□ -1.49
PCF11-202ENST00000528336 ERVK-7P63135 1459 aa5.76□□□□□ -1.49
PCF11-202ENST00000528336 SPATA31D1Q6ZQQ2 1576 aa5.76□□□□□ -1.49
PCF11-202ENST00000528336 NOS1P29475 1434 aa5.75□□□□□ -1.49
PCF11-202ENST00000528336 PLSCR5A0PG75 271 aa5.75□□□□□ -1.49
PCF11-202ENST00000528336 IPO7O95373 1038 aaKnown RBP5.75□□□□□ -1.49
PCF11-202ENST00000528336 PMS2P2O95744 297 aa5.75□□□□□ -1.49
PCF11-202ENST00000528336 DDX5P17844 614 aaKnown RBP5.75□□□□□ -1.49
PCF11-202ENST00000528336 PSMA4P25789 261 aaKnown RBP5.75□□□□□ -1.49
PCF11-202ENST00000528336 CREB5Q02930 508 aa5.75□□□□□ -1.49
PCF11-202ENST00000528336 PPARDQ03181 441 aa5.75□□□□□ -1.49
PCF11-202ENST00000528336 LRRC74AQ0VAA2 488 aa5.75□□□□□ -1.49
PCF11-202ENST00000528336 ZNF155Q12901 538 aaPredicted RBP5.75□□□□□ -1.49
PCF11-202ENST00000528336 IFT88Q13099 833 aa5.75□□□□□ -1.49
PCF11-202ENST00000528336 SNTA1Q13424 505 aa5.75□□□□□ -1.49
PCF11-202ENST00000528336 OASLQ15646 514 aaKnown RBP5.75□□□□□ -1.49
PCF11-202ENST00000528336 C9orf57Q5W0N0 161 aa5.75□□□□□ -1.49
PCF11-202ENST00000528336 DUS1LQ6P1R4 473 aaKnown RBP5.75□□□□□ -1.49
PCF11-202ENST00000528336 KCTD18Q6PI47 426 aaPredicted RBP5.75□□□□□ -1.49
PCF11-202ENST00000528336 NUP54Q7Z3B4 507 aa5.75□□□□□ -1.49
PCF11-202ENST00000528336 CCDC91Q7Z6B0 441 aa5.75□□□□□ -1.49
PCF11-202ENST00000528336 UNC45BQ8IWX7 931 aa5.75□□□□□ -1.49
PCF11-202ENST00000528336 NUP93Q8N1F7 819 aa5.75□□□□□ -1.49
PCF11-202ENST00000528336 TRIML1Q8N9V2 468 aa5.75□□□□□ -1.49
PCF11-202ENST00000528336 TANKQ92844 425 aa5.75□□□□□ -1.49
PCF11-202ENST00000528336 HGH1Q9BTY7 390 aa5.75□□□□□ -1.49
PCF11-202ENST00000528336 MXD3Q9BW11 206 aa5.75□□□□□ -1.49
PCF11-202ENST00000528336 SYNCQ9H7C4 482 aa5.75□□□□□ -1.49
PCF11-202ENST00000528336 SMARCAL1Q9NZC9 954 aa5.75□□□□□ -1.49
PCF11-202ENST00000528336 CORO1CQ9ULV4 474 aaPredicted RBP5.75□□□□□ -1.49
PCF11-202ENST00000528336 ADAM18Q9Y3Q7 739 aa5.75□□□□□ -1.49
PCF11-202ENST00000528336 PTPRTO14522 1441 aa5.74□□□□□ -1.49
PCF11-202ENST00000528336 SYNJ2BP-COX16A0A087WUM0 186 aa5.74□□□□□ -1.49
PCF11-202ENST00000528336 SAA2-SAA4A0A096LPE2 208 aa5.74□□□□□ -1.49
PCF11-202ENST00000528336 A0A1W2PQF6 199 aa5.74□□□□□ -1.49
PCF11-202ENST00000528336 C1orf226A1L170 272 aa5.74□□□□□ -1.49
PCF11-202ENST00000528336 CCDC69A6NI79 296 aa5.74□□□□□ -1.49
PCF11-202ENST00000528336 NDC80O14777 642 aa5.74□□□□□ -1.49
PCF11-202ENST00000528336 EGFP01133 1207 aa5.74□□□□□ -1.49
PCF11-202ENST00000528336 EIF2S1P05198 315 aaKnown RBP5.74□□□□□ -1.49
PCF11-202ENST00000528336 CCDC159P0C7I6 412 aa5.74□□□□□ -1.49
PCF11-202ENST00000528336 CSH1P0DML2 217 aa5.74□□□□□ -1.49
PCF11-202ENST00000528336 CSH2P0DML3 217 aa5.74□□□□□ -1.49
PCF11-202ENST00000528336 DAOP14920 347 aa5.74□□□□□ -1.49
PCF11-202ENST00000528336 ACSL1P33121 698 aa5.74□□□□□ -1.49
PCF11-202ENST00000528336 KRT2P35908 639 aa5.74□□□□□ -1.49
PCF11-202ENST00000528336 ARL3P36405 182 aa5.74□□□□□ -1.49
PCF11-202ENST00000528336 NNMTP40261 264 aa5.74□□□□□ -1.49
PCF11-202ENST00000528336 CLCN3P51790 818 aa5.74□□□□□ -1.49
PCF11-202ENST00000528336 RAD23BP54727 409 aa5.74□□□□□ -1.49
PCF11-202ENST00000528336 HNRNPH2P55795 449 aaKnown RBP5.74□□□□□ -1.49
PCF11-202ENST00000528336 IL1RL1Q01638 556 aa5.74□□□□□ -1.49
PCF11-202ENST00000528336 EEF1A2Q05639 463 aaKnown RBP5.74□□□□□ -1.49
PCF11-202ENST00000528336 KRTAP1-1Q07627 177 aa5.74□□□□□ -1.49
PCF11-202ENST00000528336 EPS8Q12929 822 aa5.74□□□□□ -1.49
PCF11-202ENST00000528336 SLMAPQ14BN4 828 aa5.74□□□□□ -1.49
PCF11-202ENST00000528336 PPA1Q15181 289 aa5.74□□□□□ -1.49
PCF11-202ENST00000528336 C1orf141Q5JVX7 400 aa5.74□□□□□ -1.49
PCF11-202ENST00000528336 KRTAP5-3Q6L8H2 238 aa5.74□□□□□ -1.49
PCF11-202ENST00000528336 CCNI2Q6ZMN8 369 aaPredicted RBP5.74□□□□□ -1.49
PCF11-202ENST00000528336 CEP97Q8IW35 865 aa5.74□□□□□ -1.49
PCF11-202ENST00000528336 WFIKKN2Q8TEU8 576 aa5.74□□□□□ -1.49
PCF11-202ENST00000528336 TAF4BQ92750 862 aa5.74□□□□□ -1.49
PCF11-202ENST00000528336 ARHGEF2Q92974 986 aaKnown RBP5.74□□□□□ -1.49
PCF11-202ENST00000528336 ZKSCAN4Q969J2 545 aaPredicted RBP5.74□□□□□ -1.49
PCF11-202ENST00000528336 ORAI1Q96D31 301 aa5.74□□□□□ -1.49
PCF11-202ENST00000528336 RRNAD1Q96FB5 475 aaKnown RBP5.74□□□□□ -1.49
PCF11-202ENST00000528336 CTAGE1Q96RT6 745 aa5.74□□□□□ -1.49
PCF11-202ENST00000528336 ACOX2Q99424 681 aa5.74□□□□□ -1.49
PCF11-202ENST00000528336 CMKLR1Q99788 373 aa5.74□□□□□ -1.49
PCF11-202ENST00000528336 ANP32EQ9BTT0 268 aa5.74□□□□□ -1.49
PCF11-202ENST00000528336 ITPAQ9BY32 194 aa5.74□□□□□ -1.49
PCF11-202ENST00000528336 KRTAP17-1Q9BYP8 105 aa5.74□□□□□ -1.49
PCF11-202ENST00000528336 ACSS1Q9NUB1 689 aaPredicted RBP5.74□□□□□ -1.49
PCF11-202ENST00000528336 MORF4L1Q9UBU8 362 aa5.74□□□□□ -1.49
PCF11-202ENST00000528336 SIX4Q9UIU6 781 aa5.74□□□□□ -1.49
PCF11-202ENST00000528336 PCDHGB4Q9UN71 923 aa5.74□□□□□ -1.49
PCF11-202ENST00000528336 PROCRQ9UNN8 238 aa5.74□□□□□ -1.49
PCF11-202ENST00000528336 TMEM5Q9Y2B1 443 aa5.74□□□□□ -1.49
PCF11-202ENST00000528336 MAU2Q9Y6X3 613 aa5.74□□□□□ -1.49
PCF11-202ENST00000528336 NLRP1Q9C000 1473 aa5.74□□□□□ -1.49
PCF11-202ENST00000528336 UHRF1BP1Q6BDS2 1440 aa5.74□□□□□ -1.49
PCF11-202ENST00000528336 MPHOSPH10O00566 681 aaKnown RBP5.73□□□□□ -1.49
PCF11-202ENST00000528336 CAPN9O14815 690 aa5.73□□□□□ -1.49
PCF11-202ENST00000528336 SLC25A12O75746 678 aa5.73□□□□□ -1.49
PCF11-202ENST00000528336 TSPAN9O75954 239 aa5.73□□□□□ -1.49
PCF11-202ENST00000528336 APBB3O95704 486 aa5.73□□□□□ -1.49
PCF11-202ENST00000528336 SFTPCP11686 197 aa5.73□□□□□ -1.49
PCF11-202ENST00000528336 LAMP2P13473 410 aa5.73□□□□□ -1.49
PCF11-202ENST00000528336 RARGP13631 454 aa5.73□□□□□ -1.49
PCF11-202ENST00000528336 IFNAR1P17181 557 aa5.73□□□□□ -1.49
PCF11-202ENST00000528336 RAD23AP54725 363 aa5.73□□□□□ -1.49
PCF11-202ENST00000528336 RRP1P56182 461 aaKnown RBP5.73□□□□□ -1.49
PCF11-202ENST00000528336 NLRP5P59047 1200 aa5.73□□□□□ -1.49
PCF11-202ENST00000528336 BRWD1-AS2P59051 145 aa5.73□□□□□ -1.49
PCF11-202ENST00000528336 SEC61BP60468 96 aaKnown RBP5.73□□□□□ -1.49
PCF11-202ENST00000528336 COASYQ13057 564 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms