RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 COPS2P61201 443 aa10.36□□□□□ -0.75
CPSF1-203ENST00000527916 DYNLT1P63172 113 aa10.36□□□□□ -0.75
CPSF1-203ENST00000527916 NFATC2Q13469 925 aa10.36□□□□□ -0.75
CPSF1-203ENST00000527916 DNASE1L3Q13609 305 aa10.36□□□□□ -0.75
CPSF1-203ENST00000527916 TMEM135Q86UB9 458 aa10.36□□□□□ -0.75
CPSF1-203ENST00000527916 TMTC1Q8IUR5 882 aa10.36□□□□□ -0.75
CPSF1-203ENST00000527916 AVL9Q8NBF6 648 aa10.36□□□□□ -0.75
CPSF1-203ENST00000527916 DTX3LQ8TDB6 740 aa10.36□□□□□ -0.75
CPSF1-203ENST00000527916 MRFAP1L1Q96HT8 127 aa10.36□□□□□ -0.75
CPSF1-203ENST00000527916 ZSCAN5AQ9BUG6 496 aa10.36□□□□□ -0.75
CPSF1-203ENST00000527916 CARD9Q9H257 536 aa10.36□□□□□ -0.75
CPSF1-203ENST00000527916 TRIM39Q9HCM9 518 aa10.36□□□□□ -0.75
CPSF1-203ENST00000527916 ACSS2Q9NR19 701 aa10.36□□□□□ -0.75
CPSF1-203ENST00000527916 SIDT1Q9NXL6 827 aaKnown RBP10.36□□□□□ -0.75
CPSF1-203ENST00000527916 ZNHIT2Q9UHR6 403 aa10.36□□□□□ -0.75
CPSF1-203ENST00000527916 ERRFI1Q9UJM3 462 aaPredicted RBP10.36□□□□□ -0.75
CPSF1-203ENST00000527916 SLC5A6Q9Y289 635 aa10.36□□□□□ -0.75
CPSF1-203ENST00000527916 ZNF451Q9Y4E5 1061 aa10.36□□□□□ -0.75
CPSF1-203ENST00000527916 PCDHGB7Q9Y5F8 929 aa10.36□□□□□ -0.75
CPSF1-203ENST00000527916 EPN1Q9Y6I3 576 aaPredicted RBP10.36□□□□□ -0.75
CPSF1-203ENST00000527916 POLEQ07864 2286 aa10.36□□□□□ -0.75
CPSF1-203ENST00000527916 hCG_1818297A0A087WSY0 165 aa10.35□□□□□ -0.75
CPSF1-203ENST00000527916 BTNL10A8MVZ5 291 aa10.35□□□□□ -0.75
CPSF1-203ENST00000527916 NUAK1O60285 661 aa10.35□□□□□ -0.75
CPSF1-203ENST00000527916 DPM1O60762 260 aa10.35□□□□□ -0.75
CPSF1-203ENST00000527916 KIAA0754O94854 1291 aa10.35□□□□□ -0.75
CPSF1-203ENST00000527916 MT-CYBP00156 380 aaPredicted RBP10.35□□□□□ -0.75
CPSF1-203ENST00000527916 ATP1A1P05023 1023 aaKnown RBP10.35□□□□□ -0.75
CPSF1-203ENST00000527916 TNNT1P13805 278 aa10.35□□□□□ -0.75
CPSF1-203ENST00000527916 ZNF28P17035 718 aa10.35□□□□□ -0.75
CPSF1-203ENST00000527916 CD68P34810 354 aaPredicted RBP10.35□□□□□ -0.75
CPSF1-203ENST00000527916 WASHC5Q12768 1159 aa10.35□□□□□ -0.75
CPSF1-203ENST00000527916 XRCC4Q13426 336 aa10.35□□□□□ -0.75
CPSF1-203ENST00000527916 GALNT3Q14435 633 aa10.35□□□□□ -0.75
CPSF1-203ENST00000527916 CHRNA6Q15825 494 aa10.35□□□□□ -0.75
CPSF1-203ENST00000527916 PPP2R5EQ16537 467 aa10.35□□□□□ -0.75
CPSF1-203ENST00000527916 KAZNQ674X7 775 aa10.35□□□□□ -0.75
CPSF1-203ENST00000527916 CYB5D1Q6P9G0 228 aa10.35□□□□□ -0.75
CPSF1-203ENST00000527916 IYDQ6PHW0 289 aa10.35□□□□□ -0.75
CPSF1-203ENST00000527916 SLC9B2Q86UD5 537 aa10.35□□□□□ -0.75
CPSF1-203ENST00000527916 TRIM74Q86UV6 250 aa10.35□□□□□ -0.75
CPSF1-203ENST00000527916 HPS6Q86YV9 775 aa10.35□□□□□ -0.75
CPSF1-203ENST00000527916 TRAM1L1Q8N609 369 aa10.35□□□□□ -0.75
CPSF1-203ENST00000527916 TTC13Q8NBP0 860 aa10.35□□□□□ -0.75
CPSF1-203ENST00000527916 GPR26Q8NDV2 337 aa10.35□□□□□ -0.75
CPSF1-203ENST00000527916 SPATA22Q8NHS9 363 aa10.35□□□□□ -0.75
CPSF1-203ENST00000527916 RBM41Q96IZ5 413 aaKnown RBP10.35□□□□□ -0.75
CPSF1-203ENST00000527916 FCRL5Q96RD9 977 aa10.35□□□□□ -0.75
CPSF1-203ENST00000527916 TRIM55Q9BYV6 548 aa10.35□□□□□ -0.75
CPSF1-203ENST00000527916 CEP41Q9BYV8 373 aa10.35□□□□□ -0.75
CPSF1-203ENST00000527916 GPR63Q9BZJ6 419 aa10.35□□□□□ -0.75
CPSF1-203ENST00000527916 TRABDQ9H4I3 376 aa10.35□□□□□ -0.75
CPSF1-203ENST00000527916 ZNF768Q9H5H4 540 aaKnown RBP10.35□□□□□ -0.75
CPSF1-203ENST00000527916 MLXIPLQ9NP71 852 aa10.35□□□□□ -0.75
CPSF1-203ENST00000527916 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.35□□□□□ -0.75
CPSF1-203ENST00000527916 SAE1Q9UBE0 346 aaPredicted RBP10.35□□□□□ -0.75
CPSF1-203ENST00000527916 FAM153AQ9UHL3 310 aa10.35□□□□□ -0.75
CPSF1-203ENST00000527916 LNPEPQ9UIQ6 1025 aa10.35□□□□□ -0.75
CPSF1-203ENST00000527916 TRHDEQ9UKU6 1024 aa10.35□□□□□ -0.75
CPSF1-203ENST00000527916 ZNF711Q9Y462 761 aa10.35□□□□□ -0.75
CPSF1-203ENST00000527916 PLEKHM1Q9Y4G2 1056 aa10.35□□□□□ -0.75
CPSF1-203ENST00000527916 ADGRG1Q9Y653 693 aa10.35□□□□□ -0.75
CPSF1-203ENST00000527916 ZNF106Q9H2Y7 1883 aaKnown RBP10.35□□□□□ -0.75
CPSF1-203ENST00000527916 PDZD2O15018 2839 aa10.34□□□□□ -0.75
CPSF1-203ENST00000527916 MN1Q10571 1320 aaPredicted RBP10.34□□□□□ -0.75
CPSF1-203ENST00000527916 KIR2DS5A0A0G2JLQ3 304 aa10.34□□□□□ -0.75
CPSF1-203ENST00000527916 A0A0G2JNG1 304 aa10.34□□□□□ -0.75
CPSF1-203ENST00000527916 OR5K4A6NMS3 321 aa10.34□□□□□ -0.75
CPSF1-203ENST00000527916 KIR2DS3K7RE56 304 aa10.34□□□□□ -0.75
CPSF1-203ENST00000527916 CHUKO15111 745 aa10.34□□□□□ -0.75
CPSF1-203ENST00000527916 TOX3O15405 576 aaPredicted RBP10.34□□□□□ -0.75
CPSF1-203ENST00000527916 HNRNPRO43390 633 aaKnown RBP10.34□□□□□ -0.75
CPSF1-203ENST00000527916 GRID2O43424 1007 aa10.34□□□□□ -0.75
CPSF1-203ENST00000527916 SLC25A14O95258 325 aaPredicted RBP10.34□□□□□ -0.75
CPSF1-203ENST00000527916 PECAM1P16284 738 aaPredicted RBP10.34□□□□□ -0.75
CPSF1-203ENST00000527916 HMGCLP35914 325 aa10.34□□□□□ -0.75
CPSF1-203ENST00000527916 CCL11P51671 97 aa10.34□□□□□ -0.75
CPSF1-203ENST00000527916 ZNF75DP51815 510 aa10.34□□□□□ -0.75
CPSF1-203ENST00000527916 ADCY2Q08462 1091 aa10.34□□□□□ -0.75
CPSF1-203ENST00000527916 KIR2DS5Q14953 304 aa10.34□□□□□ -0.75
CPSF1-203ENST00000527916 PCSK7Q16549 785 aa10.34□□□□□ -0.75
CPSF1-203ENST00000527916 UGT8Q16880 541 aa10.34□□□□□ -0.75
CPSF1-203ENST00000527916 ZDHHC20Q5W0Z9 365 aa10.34□□□□□ -0.75
CPSF1-203ENST00000527916 PAPD7Q5XG87 772 aaKnown RBP10.34□□□□□ -0.75
CPSF1-203ENST00000527916 JMJD6Q6NYC1 403 aaPredicted RBP10.34□□□□□ -0.75
CPSF1-203ENST00000527916 BBS12Q6ZW61 710 aa10.34□□□□□ -0.75
CPSF1-203ENST00000527916 MARK2Q7KZI7 788 aaKnown RBP10.34□□□□□ -0.75
CPSF1-203ENST00000527916 CHST15Q7LFX5 561 aaPredicted RBP10.34□□□□□ -0.75
CPSF1-203ENST00000527916 PID1Q7Z2X4 250 aa10.34□□□□□ -0.75
CPSF1-203ENST00000527916 DAAM2Q86T65 1068 aa10.34□□□□□ -0.75
CPSF1-203ENST00000527916 GLYATL1Q969I3 302 aa10.34□□□□□ -0.75
CPSF1-203ENST00000527916 TCTN2Q96GX1 697 aa10.34□□□□□ -0.75
CPSF1-203ENST00000527916 C9orf72Q96LT7 481 aa10.34□□□□□ -0.75
CPSF1-203ENST00000527916 PLEKHG4BQ96PX9 1271 aa10.34□□□□□ -0.75
CPSF1-203ENST00000527916 VPS35Q96QK1 796 aa10.34□□□□□ -0.75
CPSF1-203ENST00000527916 OR6C1Q96RD1 312 aa10.34□□□□□ -0.75
CPSF1-203ENST00000527916 HERPUD2Q9BSE4 406 aa10.34□□□□□ -0.75
CPSF1-203ENST00000527916 SPATA16Q9BXB7 569 aa10.34□□□□□ -0.75
CPSF1-203ENST00000527916 GPR87Q9BY21 358 aa10.34□□□□□ -0.75
CPSF1-203ENST00000527916 ACTL8Q9H568 366 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms