RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 DPP10Q8N608 796 aa3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 FNDC5Q8NAU1 212 aa3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 SRFBP1Q8NEF9 429 aaKnown RBP3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 OR2W6PQ8NHA6 318 aa3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 IFI44Q8TCB0 444 aa3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 MGARPQ8TDB4 240 aa3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 U2AF1L4Q8WU68 220 aaKnown RBP3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 FAM172AQ8WUF8 416 aa3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 ZNF480Q8WV37 535 aa3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 UBLCP1Q8WVY7 318 aaPredicted RBP3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 ASZ1Q8WWH4 475 aa3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 PSPC1Q8WXF1 523 aaKnown RBP3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 KRT35Q92764 455 aa3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 GLG1Q92896 1179 aa3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 TSR2Q969E8 191 aaKnown RBP3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 YIPF5Q969M3 257 aa3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 PHF21AQ96BD5 680 aa3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 ZDHHC12Q96GR4 267 aa3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 HES6Q96HZ4 224 aa3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 APOPT1Q96IL0 206 aa3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 MAGEB18Q96M61 343 aa3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 NUP88Q99567 741 aaPredicted RBP3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 C1orf50Q9BV19 199 aa3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 KIFC1Q9BW19 673 aa3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 KATNAL1Q9BW62 490 aa3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 ADGRE3Q9BY15 652 aa3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 TTYH3Q9C0H2 523 aa3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 WDR12Q9GZL7 423 aaKnown RBP3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 NYXQ9GZU5 481 aa3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 ELAC1Q9H777 363 aaKnown RBP3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 MAGEE1Q9HCI5 957 aa3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 PRDM8Q9NQV8 689 aa3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 PKD2L2Q9NZM6 624 aa3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 EIF3KQ9UBQ5 218 aaKnown RBP3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 LIMA1Q9UHB6 759 aaKnown RBP3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 NARFQ9UHQ1 456 aa3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 BCAP29Q9UHQ4 241 aa3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 IPO11Q9UI26 975 aaKnown RBP3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 RPS6KA6Q9UK32 745 aa3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 AGO1Q9UL18 857 aaKnown RBP3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 GTF2A1LQ9UNN4 478 aa3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 CHKBQ9Y259 395 aa3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 MTF2Q9Y483 593 aaPredicted RBP3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 IPPQ9Y573 584 aa3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 TRPV2Q9Y5S1 764 aa3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 PIAS3Q9Y6X2 628 aa3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 MAGI3Q5TCQ9 1506 aa3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 NSD3Q9BZ95 1437 aa3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 MYO5AQ9Y4I1 1855 aaKnown RBP3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 MN1Q10571 1320 aaPredicted RBP3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 FRMPD4Q14CM0 1322 aa3.69□□□□□ -1.82
CLNS1A-209ENST00000527299 BCL9LQ86UU0 1499 aa3.68□□□□□ -1.82
CLNS1A-209ENST00000527299 ARHGEF10O15013 1369 aa3.68□□□□□ -1.82
CLNS1A-209ENST00000527299 ATRNL1Q5VV63 1379 aa3.68□□□□□ -1.82
CLNS1A-209ENST00000527299 LOC100653049A0A140TA62 436 aa3.68□□□□□ -1.82
CLNS1A-209ENST00000527299 PQLC2LA1A4F0 135 aa3.68□□□□□ -1.82
CLNS1A-209ENST00000527299 LCHNA4D1U4 455 aa3.68□□□□□ -1.82
CLNS1A-209ENST00000527299 OR6C74A6NCV1 312 aa3.68□□□□□ -1.82
CLNS1A-209ENST00000527299 ACOD1A6NK06 481 aa3.68□□□□□ -1.82
CLNS1A-209ENST00000527299 C12orf71A8MTZ7 269 aa3.68□□□□□ -1.82
CLNS1A-209ENST00000527299 ERVV-1B6SEH8 477 aa3.68□□□□□ -1.82
CLNS1A-209ENST00000527299 UBXN8O00124 270 aa3.68□□□□□ -1.82
CLNS1A-209ENST00000527299 PSMD12O00232 456 aaPredicted RBP3.68□□□□□ -1.82
CLNS1A-209ENST00000527299 PODXLO00592 558 aa3.68□□□□□ -1.82
CLNS1A-209ENST00000527299 TM9SF1O15321 606 aa3.68□□□□□ -1.82
CLNS1A-209ENST00000527299 RGS16O15492 202 aaPredicted RBP3.68□□□□□ -1.82
CLNS1A-209ENST00000527299 TEX33O43247 280 aa3.68□□□□□ -1.82
CLNS1A-209ENST00000527299 BCAS1O75363 584 aaPredicted RBP3.68□□□□□ -1.82
CLNS1A-209ENST00000527299 GCATO75600 419 aa3.68□□□□□ -1.82
CLNS1A-209ENST00000527299 PALMO75781 387 aa3.68□□□□□ -1.82
CLNS1A-209ENST00000527299 KRT34O76011 436 aa3.68□□□□□ -1.82
CLNS1A-209ENST00000527299 KRT18P05783 430 aaKnown RBP3.68□□□□□ -1.82
CLNS1A-209ENST00000527299 KRT8P05787 483 aa3.68□□□□□ -1.82
CLNS1A-209ENST00000527299 RB1P06400 928 aa3.68□□□□□ -1.82
CLNS1A-209ENST00000527299 S100A9P06702 114 aaKnown RBP3.68□□□□□ -1.82
CLNS1A-209ENST00000527299 FAM58BPP0C7Q3 252 aa3.68□□□□□ -1.82
CLNS1A-209ENST00000527299 POLR2MP0CAP2 368 aa3.68□□□□□ -1.82
CLNS1A-209ENST00000527299 MYL4P12829 197 aa3.68□□□□□ -1.82
CLNS1A-209ENST00000527299 SLC5A1P13866 664 aa3.68□□□□□ -1.82
CLNS1A-209ENST00000527299 ENO3P13929 434 aaPredicted RBP3.68□□□□□ -1.82
CLNS1A-209ENST00000527299 AKR1B1P15121 316 aa3.68□□□□□ -1.82
CLNS1A-209ENST00000527299 NCF2P19878 526 aaPredicted RBP3.68□□□□□ -1.82
CLNS1A-209ENST00000527299 RAB3AP20336 220 aa3.68□□□□□ -1.82
CLNS1A-209ENST00000527299 RBL1P28749 1068 aa3.68□□□□□ -1.82
CLNS1A-209ENST00000527299 SERPINB1P30740 379 aa3.68□□□□□ -1.82
CLNS1A-209ENST00000527299 UGT2B10P36537 528 aa3.68□□□□□ -1.82
CLNS1A-209ENST00000527299 CASP3P42574 277 aa3.68□□□□□ -1.82
CLNS1A-209ENST00000527299 NR4A2P43354 598 aa3.68□□□□□ -1.82
CLNS1A-209ENST00000527299 SULT1E1P49888 294 aa3.68□□□□□ -1.82
CLNS1A-209ENST00000527299 MANFP55145 182 aaKnown RBP3.68□□□□□ -1.82
CLNS1A-209ENST00000527299 SOX10P56693 466 aa3.68□□□□□ -1.82
CLNS1A-209ENST00000527299 RAB4BP61018 213 aa3.68□□□□□ -1.82
CLNS1A-209ENST00000527299 COPZ1P61923 177 aa3.68□□□□□ -1.82
CLNS1A-209ENST00000527299 ESRRGP62508 458 aa3.68□□□□□ -1.82
CLNS1A-209ENST00000527299 KCNJ10P78508 379 aa3.68□□□□□ -1.82
CLNS1A-209ENST00000527299 MYBPC1Q00872 1141 aa3.68□□□□□ -1.82
CLNS1A-209ENST00000527299 BNC1Q01954 994 aa3.68□□□□□ -1.82
CLNS1A-209ENST00000527299 SPAG1Q07617 926 aa3.68□□□□□ -1.82
CLNS1A-209ENST00000527299 THOC5Q13769 683 aaKnown RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms