RNA–Protein interactions for RNA: ENST00000527133.2

CLNS1A-207, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-207ENST00000527133 PLCL1Q15111 1095 aa12.72□□□□□ -0.37
CLNS1A-207ENST00000527133 IFI16Q16666 785 aaKnown RBP12.72□□□□□ -0.37
CLNS1A-207ENST00000527133 KYNUQ16719 465 aa12.72□□□□□ -0.37
CLNS1A-207ENST00000527133 PRAMEF17Q5VTA0 474 aa12.72□□□□□ -0.37
CLNS1A-207ENST00000527133 PDPK2PQ6A1A2 396 aa12.72□□□□□ -0.37
CLNS1A-207ENST00000527133 MED25Q71SY5 747 aa12.72□□□□□ -0.37
CLNS1A-207ENST00000527133 D2HGDHQ8N465 521 aa12.72□□□□□ -0.37
CLNS1A-207ENST00000527133 GLIS1Q8NBF1 620 aa12.72□□□□□ -0.37
CLNS1A-207ENST00000527133 RANBP9Q96S59 729 aa12.72□□□□□ -0.37
CLNS1A-207ENST00000527133 SMAD5Q99717 465 aaKnown RBP12.72□□□□□ -0.37
CLNS1A-207ENST00000527133 MRPL47Q9HD33 250 aaKnown RBP12.72□□□□□ -0.37
CLNS1A-207ENST00000527133 KCND1Q9NSA2 647 aa12.72□□□□□ -0.37
CLNS1A-207ENST00000527133 LIMA1Q9UHB6 759 aaKnown RBP12.72□□□□□ -0.37
CLNS1A-207ENST00000527133 AMACRQ9UHK6 382 aa12.72□□□□□ -0.37
CLNS1A-207ENST00000527133 TCFL5Q9UL49 500 aa12.72□□□□□ -0.37
CLNS1A-207ENST00000527133 AKAP9Q99996 3911 aa12.72□□□□□ -0.37
CLNS1A-207ENST00000527133 F5H423 210 aaPredicted RBP12.71□□□□□ -0.37
CLNS1A-207ENST00000527133 MEN1O00255 615 aa12.71□□□□□ -0.37
CLNS1A-207ENST00000527133 DDX3YO15523 660 aaKnown RBP12.71□□□□□ -0.37
CLNS1A-207ENST00000527133 RAB40ALP0C0E4 278 aa12.71□□□□□ -0.37
CLNS1A-207ENST00000527133 CCNCP24863 283 aa12.71□□□□□ -0.37
CLNS1A-207ENST00000527133 RRADP55042 308 aa12.71□□□□□ -0.37
CLNS1A-207ENST00000527133 RIPPLY3P57055 190 aa12.71□□□□□ -0.37
CLNS1A-207ENST00000527133 GSDMDP57764 484 aa12.71□□□□□ -0.37
CLNS1A-207ENST00000527133 SLC25A11Q02978 314 aaKnown RBP12.71□□□□□ -0.37
CLNS1A-207ENST00000527133 ATP1A4Q13733 1029 aa12.71□□□□□ -0.37
CLNS1A-207ENST00000527133 ASIC2Q16515 512 aa12.71□□□□□ -0.37
CLNS1A-207ENST00000527133 PLEKHS1Q5SXH7 462 aa12.71□□□□□ -0.37
CLNS1A-207ENST00000527133 NCBP2-AS2Q69YL0 99 aa12.71□□□□□ -0.37
CLNS1A-207ENST00000527133 ZNF571Q7Z3V5 609 aaPredicted RBP12.71□□□□□ -0.37
CLNS1A-207ENST00000527133 C11orf96Q7Z7L8 435 aa12.71□□□□□ -0.37
CLNS1A-207ENST00000527133 SLC34A3Q8N130 599 aa12.71□□□□□ -0.37
CLNS1A-207ENST00000527133 ZBTB2Q8N680 514 aa12.71□□□□□ -0.37
CLNS1A-207ENST00000527133 TMEM102Q8N9M5 508 aaPredicted RBP12.71□□□□□ -0.37
CLNS1A-207ENST00000527133 FATE1Q969F0 183 aa12.71□□□□□ -0.37
CLNS1A-207ENST00000527133 MARVELD3Q96A59 401 aa12.71□□□□□ -0.37
CLNS1A-207ENST00000527133 ZNF501Q96CX3 271 aaPredicted RBP12.71□□□□□ -0.37
CLNS1A-207ENST00000527133 TSGA13Q96PP4 275 aa12.71□□□□□ -0.37
CLNS1A-207ENST00000527133 CD180Q99467 661 aa12.71□□□□□ -0.37
CLNS1A-207ENST00000527133 NLNQ9BYT8 704 aa12.71□□□□□ -0.37
CLNS1A-207ENST00000527133 HAUS4Q9H6D7 363 aa12.71□□□□□ -0.37
CLNS1A-207ENST00000527133 RAD18Q9NS91 495 aa12.71□□□□□ -0.37
CLNS1A-207ENST00000527133 SOHLH2Q9NX45 425 aa12.71□□□□□ -0.37
CLNS1A-207ENST00000527133 PSMD13Q9UNM6 376 aa12.71□□□□□ -0.37
CLNS1A-207ENST00000527133 B3GNT3Q9Y2A9 372 aa12.71□□□□□ -0.37
CLNS1A-207ENST00000527133 ARHGAP10A1A4S6 786 aa12.7□□□□□ -0.38
CLNS1A-207ENST00000527133 OR5K3A6NET4 321 aa12.7□□□□□ -0.38
CLNS1A-207ENST00000527133 LRRC53A6NM62 1247 aa12.7□□□□□ -0.38
CLNS1A-207ENST00000527133 DDX3XO00571 662 aaKnown RBP eCLIP12.7□□□□□ -0.382e-22■■■□□ 15.8
CLNS1A-207ENST00000527133 ZBTB11O95625 1053 aaPredicted RBP12.7□□□□□ -0.38
CLNS1A-207ENST00000527133 MYBL1P10243 752 aa12.7□□□□□ -0.38
CLNS1A-207ENST00000527133 GZMAP12544 262 aa12.7□□□□□ -0.38
CLNS1A-207ENST00000527133 PRF1P14222 555 aa12.7□□□□□ -0.38
CLNS1A-207ENST00000527133 BPIP17213 487 aa12.7□□□□□ -0.38
CLNS1A-207ENST00000527133 HNRNPH3P31942 346 aaKnown RBP12.7□□□□□ -0.38
CLNS1A-207ENST00000527133 SSR1P43307 286 aaKnown RBP12.7□□□□□ -0.38
CLNS1A-207ENST00000527133 GTF2H3Q13889 308 aa12.7□□□□□ -0.38
CLNS1A-207ENST00000527133 PIGHQ14442 188 aaPredicted RBP12.7□□□□□ -0.38
CLNS1A-207ENST00000527133 PAFAH1B3Q15102 231 aaKnown RBP12.7□□□□□ -0.38
CLNS1A-207ENST00000527133 RPE65Q16518 533 aa12.7□□□□□ -0.38
CLNS1A-207ENST00000527133 TMTC4Q5T4D3 741 aa12.7□□□□□ -0.38
CLNS1A-207ENST00000527133 VWA5B1Q5TIE3 1220 aa12.7□□□□□ -0.38
CLNS1A-207ENST00000527133 FBXO38Q6PIJ6 1188 aa12.7□□□□□ -0.38
CLNS1A-207ENST00000527133 TMC3Q7Z5M5 1100 aa12.7□□□□□ -0.38
CLNS1A-207ENST00000527133 DSELQ8IZU8 1212 aa12.7□□□□□ -0.38
CLNS1A-207ENST00000527133 OR8K5Q8NH50 307 aa12.7□□□□□ -0.38
CLNS1A-207ENST00000527133 GDAP1Q8TB36 358 aa12.7□□□□□ -0.38
CLNS1A-207ENST00000527133 CPT1BQ92523 772 aa12.7□□□□□ -0.38
CLNS1A-207ENST00000527133 CLIP3Q96DZ5 547 aa12.7□□□□□ -0.38
CLNS1A-207ENST00000527133 MOCOSQ96EN8 888 aa12.7□□□□□ -0.38
CLNS1A-207ENST00000527133 TRIM11Q96F44 468 aa12.7□□□□□ -0.38
CLNS1A-207ENST00000527133 SGSM3Q96HU1 749 aa12.7□□□□□ -0.38
CLNS1A-207ENST00000527133 BTBD6Q96KE9 485 aa12.7□□□□□ -0.38
CLNS1A-207ENST00000527133 LRFN5Q96NI6 719 aa12.7□□□□□ -0.38
CLNS1A-207ENST00000527133 GPR63Q9BZJ6 419 aa12.7□□□□□ -0.38
CLNS1A-207ENST00000527133 ILKAPQ9H0C8 392 aaPredicted RBP12.7□□□□□ -0.38
CLNS1A-207ENST00000527133 IMP3Q9NV31 184 aaKnown RBP12.7□□□□□ -0.38
CLNS1A-207ENST00000527133 HRASLS2Q9NWW9 162 aa12.7□□□□□ -0.38
CLNS1A-207ENST00000527133 C5AR2Q9P296 337 aa12.7□□□□□ -0.38
CLNS1A-207ENST00000527133 NFKBIL1Q9UBC1 381 aaPredicted RBP12.7□□□□□ -0.38
CLNS1A-207ENST00000527133 TMPRSS11EQ9UL52 423 aa12.7□□□□□ -0.38
CLNS1A-207ENST00000527133 ZNF711Q9Y462 761 aa12.7□□□□□ -0.38
CLNS1A-207ENST00000527133 POLEQ07864 2286 aa12.69□□□□□ -0.38
CLNS1A-207ENST00000527133 DIDO1Q9BTC0 2240 aaKnown RBP12.69□□□□□ -0.38
CLNS1A-207ENST00000527133 KCNK1O00180 336 aa12.69□□□□□ -0.38
CLNS1A-207ENST00000527133 HNRNPRO43390 633 aaKnown RBP12.69□□□□□ -0.38
CLNS1A-207ENST00000527133 CDK11BP21127 795 aaKnown RBP12.69□□□□□ -0.38
CLNS1A-207ENST00000527133 RORAP35398 523 aa12.69□□□□□ -0.38
CLNS1A-207ENST00000527133 ARCN1P48444 511 aaKnown RBP12.69□□□□□ -0.38
CLNS1A-207ENST00000527133 TMEM115Q12893 351 aaPredicted RBP12.69□□□□□ -0.38
CLNS1A-207ENST00000527133 ABRQ12979 859 aa12.69□□□□□ -0.38
CLNS1A-207ENST00000527133 NAA30Q147X3 362 aaPredicted RBP12.69□□□□□ -0.38
CLNS1A-207ENST00000527133 FAM182AQ5T1J6 154 aa12.69□□□□□ -0.38
CLNS1A-207ENST00000527133 FAM198BQ6UWH4 519 aa12.69□□□□□ -0.38
CLNS1A-207ENST00000527133 FAM83HQ6ZRV2 1179 aaPredicted RBP12.69□□□□□ -0.38
CLNS1A-207ENST00000527133 AMZ2Q86W34 360 aa12.69□□□□□ -0.38
CLNS1A-207ENST00000527133 OOSP2Q86WS3 158 aa12.69□□□□□ -0.38
CLNS1A-207ENST00000527133 CCNYQ8ND76 341 aa12.69□□□□□ -0.38
CLNS1A-207ENST00000527133 PPM1MQ96MI6 270 aa12.69□□□□□ -0.38
CLNS1A-207ENST00000527133 TRIB3Q96RU7 358 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms