RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 FAM114A2Q9NRY5 505 aa12.72□□□□□ -0.37
SMPD1-202ENST00000526280 C20orf96Q9NUD7 363 aaPredicted RBP12.72□□□□□ -0.37
SMPD1-202ENST00000526280 ZDHHC18Q9NUE0 388 aa12.72□□□□□ -0.37
SMPD1-202ENST00000526280 IL1RAPL1Q9NZN1 696 aa12.72□□□□□ -0.37
SMPD1-202ENST00000526280 SIRPGQ9P1W8 387 aa12.72□□□□□ -0.37
SMPD1-202ENST00000526280 TBC1D29Q9UFV1 150 aa12.72□□□□□ -0.37
SMPD1-202ENST00000526280 ZC3H7BQ9UGR2 993 aaKnown RBP12.72□□□□□ -0.37
SMPD1-202ENST00000526280 CHMP2BQ9UQN3 213 aa12.72□□□□□ -0.37
SMPD1-202ENST00000526280 PRSS21Q9Y6M0 314 aa12.72□□□□□ -0.37
SMPD1-202ENST00000526280 CACNA1AO00555 2505 aa12.72□□□□□ -0.37
SMPD1-202ENST00000526280 PIKFYVEQ9Y2I7 2098 aa12.72□□□□□ -0.37
SMPD1-202ENST00000526280 SPAARA0A1B0GVQ0 90 aa12.71□□□□□ -0.37
SMPD1-202ENST00000526280 KLHL33A6NCF5 533 aa12.71□□□□□ -0.37
SMPD1-202ENST00000526280 A6NCN8 305 aa12.71□□□□□ -0.37
SMPD1-202ENST00000526280 MGAT4DA6NG13 374 aa12.71□□□□□ -0.37
SMPD1-202ENST00000526280 B4DGG1 531 aa12.71□□□□□ -0.37
SMPD1-202ENST00000526280 NOBOXO60393 691 aa12.71□□□□□ -0.37
SMPD1-202ENST00000526280 MYF5P13349 255 aa12.71□□□□□ -0.37
SMPD1-202ENST00000526280 VCLP18206 1134 aa12.71□□□□□ -0.37
SMPD1-202ENST00000526280 OGNP20774 298 aaKnown RBP12.71□□□□□ -0.37
SMPD1-202ENST00000526280 ACP1P24666 158 aa12.71□□□□□ -0.37
SMPD1-202ENST00000526280 PMLP29590 882 aa12.71□□□□□ -0.37
SMPD1-202ENST00000526280 RPIAP49247 311 aa12.71□□□□□ -0.37
SMPD1-202ENST00000526280 SIM1P81133 766 aaPredicted RBP12.71□□□□□ -0.37
SMPD1-202ENST00000526280 DMPKQ09013 629 aa12.71□□□□□ -0.37
SMPD1-202ENST00000526280 DNAJC3Q13217 504 aa12.71□□□□□ -0.37
SMPD1-202ENST00000526280 THOC5Q13769 683 aaKnown RBP12.71□□□□□ -0.37
SMPD1-202ENST00000526280 FASTKD3Q14CZ7 662 aaKnown RBP12.71□□□□□ -0.37
SMPD1-202ENST00000526280 NR0B2Q15466 257 aa12.71□□□□□ -0.37
SMPD1-202ENST00000526280 SMAD1Q15797 465 aaKnown RBP12.71□□□□□ -0.37
SMPD1-202ENST00000526280 TYSND1Q2T9J0 566 aa12.71□□□□□ -0.37
SMPD1-202ENST00000526280 TEX35Q5T0J7 233 aa12.71□□□□□ -0.37
SMPD1-202ENST00000526280 STEAP4Q687X5 459 aa12.71□□□□□ -0.37
SMPD1-202ENST00000526280 UNC5AQ6ZN44 842 aa12.71□□□□□ -0.37
SMPD1-202ENST00000526280 C17orf82Q86X59 251 aaPredicted RBP12.71□□□□□ -0.37
SMPD1-202ENST00000526280 CILP2Q8IUL8 1156 aa12.71□□□□□ -0.37
SMPD1-202ENST00000526280 ANKMY2Q8IV38 441 aa12.71□□□□□ -0.37
SMPD1-202ENST00000526280 SFTPA2Q8IWL1 248 aa12.71□□□□□ -0.37
SMPD1-202ENST00000526280 LMNTD2Q8IXW0 634 aa12.71□□□□□ -0.37
SMPD1-202ENST00000526280 NAGSQ8N159 534 aa12.71□□□□□ -0.37
SMPD1-202ENST00000526280 OTUD6BQ8N6M0 293 aa12.71□□□□□ -0.37
SMPD1-202ENST00000526280 KYQ8NBH2 561 aa12.71□□□□□ -0.37
SMPD1-202ENST00000526280 FBXO36Q8NEA4 188 aa12.71□□□□□ -0.37
SMPD1-202ENST00000526280 OR2L2Q8NH16 312 aa12.71□□□□□ -0.37
SMPD1-202ENST00000526280 CCM2Q9BSQ5 444 aa12.71□□□□□ -0.37
SMPD1-202ENST00000526280 FAM129AQ9BZQ8 928 aa12.71□□□□□ -0.37
SMPD1-202ENST00000526280 PHACTR1Q9C0D0 580 aa12.71□□□□□ -0.37
SMPD1-202ENST00000526280 SAYSD1Q9NPB0 183 aa12.71□□□□□ -0.37
SMPD1-202ENST00000526280 TOR4AQ9NXH8 423 aa12.71□□□□□ -0.37
SMPD1-202ENST00000526280 GULP1Q9UBP9 304 aa12.71□□□□□ -0.37
SMPD1-202ENST00000526280 PADI4Q9UM07 663 aa12.71□□□□□ -0.37
SMPD1-202ENST00000526280 DNAJC16Q9Y2G8 782 aa12.71□□□□□ -0.37
SMPD1-202ENST00000526280 ASXL3Q9C0F0 2248 aa12.7□□□□□ -0.38
SMPD1-202ENST00000526280 C17orf113A0A1B0GUU1 675 aa12.7□□□□□ -0.38
SMPD1-202ENST00000526280 EME2A4GXA9 379 aaPredicted RBP12.7□□□□□ -0.38
SMPD1-202ENST00000526280 QSOX1O00391 747 aa12.7□□□□□ -0.38
SMPD1-202ENST00000526280 PRMT5O14744 637 aaPredicted RBP12.7□□□□□ -0.38
SMPD1-202ENST00000526280 NDUFS3O75489 264 aa12.7□□□□□ -0.38
SMPD1-202ENST00000526280 EML2O95834 649 aa12.7□□□□□ -0.38
SMPD1-202ENST00000526280 S1PR4O95977 384 aa12.7□□□□□ -0.38
SMPD1-202ENST00000526280 IDSP22304 550 aa12.7□□□□□ -0.38
SMPD1-202ENST00000526280 ACADVLP49748 655 aa12.7□□□□□ -0.38
SMPD1-202ENST00000526280 DUSP3P51452 185 aaPredicted RBP12.7□□□□□ -0.38
SMPD1-202ENST00000526280 DAB2P98082 770 aa12.7□□□□□ -0.38
SMPD1-202ENST00000526280 FRG1Q14331 258 aaKnown RBP12.7□□□□□ -0.38
SMPD1-202ENST00000526280 ZNF658BQ4V348 819 aaPredicted RBP12.7□□□□□ -0.38
SMPD1-202ENST00000526280 C14orf28Q4W4Y0 310 aa12.7□□□□□ -0.38
SMPD1-202ENST00000526280 HSP90AA5PQ58FG0 334 aa12.7□□□□□ -0.38
SMPD1-202ENST00000526280 PPM1JQ5JR12 505 aa12.7□□□□□ -0.38
SMPD1-202ENST00000526280 RNF187Q5TA31 235 aaPredicted RBP12.7□□□□□ -0.38
SMPD1-202ENST00000526280 METRNLQ641Q3 311 aa12.7□□□□□ -0.38
SMPD1-202ENST00000526280 IYDQ6PHW0 289 aa12.7□□□□□ -0.38
SMPD1-202ENST00000526280 WASH2PQ6VEQ5 465 aa12.7□□□□□ -0.38
SMPD1-202ENST00000526280 FAM83HQ6ZRV2 1179 aaPredicted RBP12.7□□□□□ -0.38
SMPD1-202ENST00000526280 KCNMB4Q86W47 210 aa12.7□□□□□ -0.38
SMPD1-202ENST00000526280 ZBED8Q8IZ13 594 aa12.7□□□□□ -0.38
SMPD1-202ENST00000526280 UNC5BQ8IZJ1 945 aa12.7□□□□□ -0.38
SMPD1-202ENST00000526280 CALML6Q8TD86 181 aa12.7□□□□□ -0.38
SMPD1-202ENST00000526280 PYROXD1Q8WU10 500 aa12.7□□□□□ -0.38
SMPD1-202ENST00000526280 CFAP36Q96G28 342 aa12.7□□□□□ -0.38
SMPD1-202ENST00000526280 P2RY12Q9H244 342 aa12.7□□□□□ -0.38
SMPD1-202ENST00000526280 OSGEPL1Q9H4B0 414 aa12.7□□□□□ -0.38
SMPD1-202ENST00000526280 VPS37BQ9H9H4 285 aa12.7□□□□□ -0.38
SMPD1-202ENST00000526280 WASH6PQ9NQA3 447 aa12.7□□□□□ -0.38
SMPD1-202ENST00000526280 PRDM8Q9NQV8 689 aa12.7□□□□□ -0.38
SMPD1-202ENST00000526280 EVA1BQ9NVM1 165 aa12.7□□□□□ -0.38
SMPD1-202ENST00000526280 OR5K4A6NMS3 321 aa12.69□□□□□ -0.38
SMPD1-202ENST00000526280 F8W8V4 182 aa12.69□□□□□ -0.38
SMPD1-202ENST00000526280 PFDN6O15212 129 aa12.69□□□□□ -0.38
SMPD1-202ENST00000526280 SNX2O60749 519 aa12.69□□□□□ -0.38
SMPD1-202ENST00000526280 DKK1O94907 266 aa12.69□□□□□ -0.38
SMPD1-202ENST00000526280 GSTM1P09488 218 aa12.69□□□□□ -0.38
SMPD1-202ENST00000526280 OR56A5P0C7T3 313 aa12.69□□□□□ -0.38
SMPD1-202ENST00000526280 ERVK-10P10266 1014 aa12.69□□□□□ -0.38
SMPD1-202ENST00000526280 F3P13726 295 aa12.69□□□□□ -0.38
SMPD1-202ENST00000526280 RPS3P23396 243 aaKnown RBP eCLIP12.69□□□□□ -0.38
SMPD1-202ENST00000526280 PBLDP30039 288 aaPredicted RBP12.69□□□□□ -0.38
SMPD1-202ENST00000526280 ADARP55265 1226 aaKnown RBP12.69□□□□□ -0.38
SMPD1-202ENST00000526280 GSTM4Q03013 218 aa12.69□□□□□ -0.38
SMPD1-202ENST00000526280 CTBP1Q13363 440 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms