RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 AGAP9Q5VTM2 703 aa12.61□□□□□ -0.39
TRAPPC4-205ENST00000525079 PPP1R21Q6ZMI0 780 aa12.61□□□□□ -0.39
TRAPPC4-205ENST00000525079 TMEM26Q6ZUK4 368 aa12.61□□□□□ -0.39
TRAPPC4-205ENST00000525079 SNX20Q7Z614 316 aa12.61□□□□□ -0.39
TRAPPC4-205ENST00000525079 LINC00523Q86TU6 105 aa12.61□□□□□ -0.39
TRAPPC4-205ENST00000525079 NXPE1Q8N323 547 aa12.61□□□□□ -0.39
TRAPPC4-205ENST00000525079 JPH3Q8WXH2 748 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC4-205ENST00000525079 TMEM159Q96B96 161 aa12.61□□□□□ -0.39
TRAPPC4-205ENST00000525079 CXorf40BQ96DE9 158 aa12.61□□□□□ -0.39
TRAPPC4-205ENST00000525079 DCUN1D1Q96GG9 259 aa12.61□□□□□ -0.39
TRAPPC4-205ENST00000525079 CDKN2AIPNLQ96HQ2 116 aa12.61□□□□□ -0.39
TRAPPC4-205ENST00000525079 CPNE5Q9HCH3 593 aa12.61□□□□□ -0.39
TRAPPC4-205ENST00000525079 OCIAD1Q9NX40 245 aa12.61□□□□□ -0.39
TRAPPC4-205ENST00000525079 ITPR1Q14643 2758 aa12.61□□□□□ -0.39
TRAPPC4-205ENST00000525079 OR51F1A6NGY5 319 aa12.6□□□□□ -0.39
TRAPPC4-205ENST00000525079 AGAP14A8MT82 685 aa12.6□□□□□ -0.39
TRAPPC4-205ENST00000525079 C9orf172C9J069 976 aa12.6□□□□□ -0.39
TRAPPC4-205ENST00000525079 SGTAO43765 313 aa12.6□□□□□ -0.39
TRAPPC4-205ENST00000525079 KCNJ13O60928 360 aa12.6□□□□□ -0.39
TRAPPC4-205ENST00000525079 POLBP06746 335 aa12.6□□□□□ -0.39
TRAPPC4-205ENST00000525079 FGF3P11487 239 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC4-205ENST00000525079 AMD1P17707 334 aa12.6□□□□□ -0.39
TRAPPC4-205ENST00000525079 CSTF2P33240 577 aaKnown RBP eCLIP12.6□□□□□ -0.39
TRAPPC4-205ENST00000525079 HALP42357 657 aa12.6□□□□□ -0.39
TRAPPC4-205ENST00000525079 ARSDP51689 593 aa12.6□□□□□ -0.39
TRAPPC4-205ENST00000525079 TERF1P54274 439 aa12.6□□□□□ -0.39
TRAPPC4-205ENST00000525079 EPHA4P54764 986 aa12.6□□□□□ -0.39
TRAPPC4-205ENST00000525079 CXADRP78310 365 aa12.6□□□□□ -0.39
TRAPPC4-205ENST00000525079 DMPKQ09013 629 aa12.6□□□□□ -0.39
TRAPPC4-205ENST00000525079 CDH17Q12864 832 aa12.6□□□□□ -0.39
TRAPPC4-205ENST00000525079 GPR18Q14330 331 aa12.6□□□□□ -0.39
TRAPPC4-205ENST00000525079 TGIF1Q15583 401 aa12.6□□□□□ -0.39
TRAPPC4-205ENST00000525079 BROXQ5VW32 411 aa12.6□□□□□ -0.39
TRAPPC4-205ENST00000525079 WASH2PQ6VEQ5 465 aa12.6□□□□□ -0.39
TRAPPC4-205ENST00000525079 GSTA5Q7RTV2 222 aa12.6□□□□□ -0.39
TRAPPC4-205ENST00000525079 SERPINA9Q86WD7 417 aa12.6□□□□□ -0.39
TRAPPC4-205ENST00000525079 ZFAND4Q86XD8 727 aa12.6□□□□□ -0.39
TRAPPC4-205ENST00000525079 STYXQ8WUJ0 223 aa12.6□□□□□ -0.39
TRAPPC4-205ENST00000525079 PMEPA1Q969W9 287 aa12.6□□□□□ -0.39
TRAPPC4-205ENST00000525079 ULK4Q96C45 1275 aa12.6□□□□□ -0.39
TRAPPC4-205ENST00000525079 COPS8Q99627 209 aa12.6□□□□□ -0.39
TRAPPC4-205ENST00000525079 DPYSL5Q9BPU6 564 aa12.6□□□□□ -0.39
TRAPPC4-205ENST00000525079 WWP1Q9H0M0 922 aa12.6□□□□□ -0.39
TRAPPC4-205ENST00000525079 PRORYQ9H606 182 aa12.6□□□□□ -0.39
TRAPPC4-205ENST00000525079 SLC40A1Q9NP59 571 aa12.6□□□□□ -0.39
TRAPPC4-205ENST00000525079 WASH6PQ9NQA3 447 aa12.6□□□□□ -0.39
TRAPPC4-205ENST00000525079 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.6□□□□□ -0.39
TRAPPC4-205ENST00000525079 OGFRQ9NZT2 677 aa12.6□□□□□ -0.39
TRAPPC4-205ENST00000525079 FOXJ2Q9P0K8 574 aa12.6□□□□□ -0.39
TRAPPC4-205ENST00000525079 PAK5Q9P286 719 aa12.6□□□□□ -0.39
TRAPPC4-205ENST00000525079 DRG1Q9Y295 367 aaKnown RBP12.6□□□□□ -0.39
TRAPPC4-205ENST00000525079 PCDHGA7Q9Y5G6 932 aa12.6□□□□□ -0.39
TRAPPC4-205ENST00000525079 CFAP20Q9Y6A4 193 aaKnown RBP12.6□□□□□ -0.39
TRAPPC4-205ENST00000525079 DNMT3AQ9Y6K1 912 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC4-205ENST00000525079 CHD6Q8TD26 2715 aa12.6□□□□□ -0.39
TRAPPC4-205ENST00000525079 BPTFQ12830 3046 aa12.59□□□□□ -0.39
TRAPPC4-205ENST00000525079 MGAT4DA6NG13 374 aa12.59□□□□□ -0.39
TRAPPC4-205ENST00000525079 LILRA5A6NI73 299 aa12.59□□□□□ -0.39
TRAPPC4-205ENST00000525079 EFCAB7A8K855 629 aa12.59□□□□□ -0.39
TRAPPC4-205ENST00000525079 ERI2A8K979 691 aaKnown RBP12.59□□□□□ -0.39
TRAPPC4-205ENST00000525079 HGSO14964 777 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC4-205ENST00000525079 NVLO15381 856 aaKnown RBP12.59□□□□□ -0.39
TRAPPC4-205ENST00000525079 SUN1O94901 812 aa12.59□□□□□ -0.39
TRAPPC4-205ENST00000525079 GAS8O95995 478 aa12.59□□□□□ -0.39
TRAPPC4-205ENST00000525079 APRTP07741 180 aa12.59□□□□□ -0.39
TRAPPC4-205ENST00000525079 RALBP11234 206 aa12.59□□□□□ -0.39
TRAPPC4-205ENST00000525079 ATP1B2P14415 290 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC4-205ENST00000525079 GFERP55789 205 aa12.59□□□□□ -0.39
TRAPPC4-205ENST00000525079 CLN3Q13286 438 aa12.59□□□□□ -0.39
TRAPPC4-205ENST00000525079 SEMA5AQ13591 1074 aa12.59□□□□□ -0.39
TRAPPC4-205ENST00000525079 TRA2AQ13595 282 aaKnown RBP eCLIP12.59□□□□□ -0.39
TRAPPC4-205ENST00000525079 RPE65Q16518 533 aa12.59□□□□□ -0.39
TRAPPC4-205ENST00000525079 GPR33Q49SQ1 333 aa12.59□□□□□ -0.39
TRAPPC4-205ENST00000525079 METRNLQ641Q3 311 aa12.59□□□□□ -0.39
TRAPPC4-205ENST00000525079 DUS1LQ6P1R4 473 aaKnown RBP12.59□□□□□ -0.39
TRAPPC4-205ENST00000525079 WDR74Q6RFH5 385 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC4-205ENST00000525079 FAM129CQ86XR2 697 aa12.59□□□□□ -0.39
TRAPPC4-205ENST00000525079 REXO1L1PQ8IX06 675 aa12.59□□□□□ -0.39
TRAPPC4-205ENST00000525079 PIANPQ8IYJ0 282 aa12.59□□□□□ -0.39
TRAPPC4-205ENST00000525079 CFAP206Q8IYR0 622 aa12.59□□□□□ -0.39
TRAPPC4-205ENST00000525079 LILRA3Q8N6C8 439 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC4-205ENST00000525079 AVL9Q8NBF6 648 aa12.59□□□□□ -0.39
TRAPPC4-205ENST00000525079 AGBL5Q8NDL9 886 aa12.59□□□□□ -0.39
TRAPPC4-205ENST00000525079 GPR150Q8NGU9 434 aa12.59□□□□□ -0.39
TRAPPC4-205ENST00000525079 MAIP1Q8WWC4 291 aa12.59□□□□□ -0.39
TRAPPC4-205ENST00000525079 ART4Q93070 314 aa12.59□□□□□ -0.39
TRAPPC4-205ENST00000525079 MS4A14Q96JA4 679 aa12.59□□□□□ -0.39
TRAPPC4-205ENST00000525079 ZNF514Q96K75 400 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC4-205ENST00000525079 FCRL3Q96P31 734 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC4-205ENST00000525079 INSM2Q96T92 566 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC4-205ENST00000525079 DPH1Q9BZG8 443 aa12.59□□□□□ -0.39
TRAPPC4-205ENST00000525079 POT1Q9NUX5 634 aa12.59□□□□□ -0.39
TRAPPC4-205ENST00000525079 IMP3Q9NV31 184 aaKnown RBP12.59□□□□□ -0.39
TRAPPC4-205ENST00000525079 TRMT1Q9NXH9 659 aaKnown RBP12.59□□□□□ -0.39
TRAPPC4-205ENST00000525079 ZDHHC3Q9NYG2 299 aa12.59□□□□□ -0.39
TRAPPC4-205ENST00000525079 PDP2Q9P2J9 529 aa12.59□□□□□ -0.39
TRAPPC4-205ENST00000525079 SLC2A6Q9UGQ3 507 aa12.59□□□□□ -0.39
TRAPPC4-205ENST00000525079 TRBV5-4A0A0C4DH59 114 aa12.58□□□□□ -0.4
TRAPPC4-205ENST00000525079 CCDC162PA2VCL2 907 aa12.58□□□□□ -0.4
TRAPPC4-205ENST00000525079 MROH6A6NGR9 719 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms