RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 CLCNKAP51800 687 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 OR1D5P58170 312 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 ARHGAP8P85298 464 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 HSPA14Q0VDF9 509 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 FOXC1Q12948 553 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 ABRQ12979 859 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 PRKG2Q13237 762 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 CUL1Q13616 776 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 LAMB3Q13751 1172 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 TUBB2AQ13885 445 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 ZNF460Q14592 562 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 CLCA4Q14CN2 919 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 PROX2Q3B8N5 592 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 AMZ1Q400G9 498 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 GPR33Q49SQ1 333 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 SPANXN3Q5MJ09 141 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 CTSL3PQ5NE16 218 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 C6orf132Q5T0Z8 1188 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 RBM20Q5T481 1227 aaKnown RBP4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 TEDDM1Q5T9Z0 273 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 N4BP2L1Q5TBK1 243 aaPredicted RBP4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 NKAIN2Q5VXU1 208 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 PDPK2PQ6A1A2 396 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 PTRHD1Q6GMV3 140 aaKnown RBP4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 KIAA0930Q6ICG6 404 aaPredicted RBP4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 ZNF549Q6P9A3 640 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 DHRS13Q6UX07 377 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 DBX2Q6ZNG2 339 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 USP53Q70EK8 1073 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 EFL1Q7Z2Z2 1120 aaKnown RBP4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 SDCCAG8Q86SQ7 713 aaPredicted RBP4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 TMEM135Q86UB9 458 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 PIM3Q86V86 326 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 AMZ2Q86W34 360 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 VRK3Q8IV63 474 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 PALM2Q8IXS6 379 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 ARL14Q8N4G2 192 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 CHCHD4Q8N4Q1 142 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 OXR1Q8N573 874 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 C2orf73Q8N5S3 287 aaPredicted RBP4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 SIDT2Q8NBJ9 832 aaKnown RBP4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 BBOF1Q8ND07 529 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 GPR150Q8NGU9 434 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 CFAP61Q8NHU2 1237 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 IFI44Q8TCB0 444 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 SLC37A2Q8TED4 501 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 FBF1Q8TES7 1133 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 PYROXD1Q8WU10 500 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 ELMO1Q92556 727 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 CCDC74AQ96AQ1 378 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 ULK4Q96C45 1275 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 CERS2Q96G23 380 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 TUBB2BQ9BVA1 445 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 GSDMCQ9BYG8 508 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 UNKQ9C0B0 810 aaKnown RBP4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 ANKZF1Q9H8Y5 726 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 MRM3Q9HC36 420 aaKnown RBP4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 IMP3Q9NV31 184 aaKnown RBP4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 SMOXQ9NWM0 555 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 TRNAU1APQ9NX07 287 aaKnown RBP4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 TOR4AQ9NXH8 423 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 DLL3Q9NYJ7 618 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 NLGN3Q9NZ94 848 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 NINJ2Q9NZG7 142 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 LRIT1Q9P2V4 623 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 FBXO5Q9UKT4 447 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 ATXN7L1Q9ULK2 861 aaPredicted RBP4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 PADI4Q9UM07 663 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 PLAGL1Q9UM63 463 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 DOCK9Q9BZ29 2069 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 ZFHX2Q9C0A1 2572 aaPredicted RBP4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 LAMA1P25391 3075 aa4.52□□□□□ -1.69
CHMP4A-202ENST00000524955 LRRK1Q38SD2 2015 aa4.51□□□□□ -1.69
CHMP4A-202ENST00000524955 CEP192Q8TEP8 1941 aa4.51□□□□□ -1.69
CHMP4A-202ENST00000524955 IGLV3-16A0A075B6K0 115 aa4.51□□□□□ -1.69
CHMP4A-202ENST00000524955 TCRBV9S1A1TA0A576 114 aa4.51□□□□□ -1.69
CHMP4A-202ENST00000524955 MAGEB16A2A368 324 aa4.51□□□□□ -1.69
CHMP4A-202ENST00000524955 PMS2P1A4D2B8 440 aa4.51□□□□□ -1.69
CHMP4A-202ENST00000524955 A6NCN8 305 aa4.51□□□□□ -1.69
CHMP4A-202ENST00000524955 BHMG1C9JSJ3 638 aaPredicted RBP4.51□□□□□ -1.69
CHMP4A-202ENST00000524955 CFAP99D6REC4 459 aa4.51□□□□□ -1.69
CHMP4A-202ENST00000524955 E7ESA3 106 aa4.51□□□□□ -1.69
CHMP4A-202ENST00000524955 PRMT5O14744 637 aaPredicted RBP4.51□□□□□ -1.69
CHMP4A-202ENST00000524955 YKT6O15498 198 aa4.51□□□□□ -1.69
CHMP4A-202ENST00000524955 TNFSF14O43557 240 aa4.51□□□□□ -1.69
CHMP4A-202ENST00000524955 HYAL3O43820 417 aaPredicted RBP4.51□□□□□ -1.69
CHMP4A-202ENST00000524955 FOXD2O60548 495 aaPredicted RBP4.51□□□□□ -1.69
CHMP4A-202ENST00000524955 SLU7O95391 586 aaKnown RBP4.51□□□□□ -1.69
CHMP4A-202ENST00000524955 ACSL3O95573 720 aa4.51□□□□□ -1.69
CHMP4A-202ENST00000524955 AHSGP02765 367 aa4.51□□□□□ -1.69
CHMP4A-202ENST00000524955 FTH1P19P0C7X4 201 aa4.51□□□□□ -1.69
CHMP4A-202ENST00000524955 ZNF883P0CG24 379 aa4.51□□□□□ -1.69
CHMP4A-202ENST00000524955 ALPPL2P10696 532 aa4.51□□□□□ -1.69
CHMP4A-202ENST00000524955 RALBP11234 206 aa4.51□□□□□ -1.69
CHMP4A-202ENST00000524955 CKMT2P17540 419 aa4.51□□□□□ -1.69
CHMP4A-202ENST00000524955 TYRP1P17643 537 aa4.51□□□□□ -1.69
CHMP4A-202ENST00000524955 CHRM3P20309 590 aa4.51□□□□□ -1.69
CHMP4A-202ENST00000524955 SLC19A1P41440 591 aa4.51□□□□□ -1.69
CHMP4A-202ENST00000524955 NSG1P42857 185 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms