RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 MRPL43Q8N983 215 aaKnown RBP3.88□□□□□ -1.79
NSMCE2-211ENST00000523549 MIGA1Q8NAN2 632 aa3.88□□□□□ -1.79
NSMCE2-211ENST00000523549 ZNF114Q8NC26 417 aa3.88□□□□□ -1.79
NSMCE2-211ENST00000523549 KCNJ9Q92806 393 aa3.88□□□□□ -1.79
NSMCE2-211ENST00000523549 PIGSQ96S52 555 aa3.88□□□□□ -1.79
NSMCE2-211ENST00000523549 IFT27Q9BW83 186 aa3.88□□□□□ -1.79
NSMCE2-211ENST00000523549 TEX13BQ9BXU2 312 aa3.88□□□□□ -1.79
NSMCE2-211ENST00000523549 CADM1Q9BY67 442 aaKnown RBP3.88□□□□□ -1.79
NSMCE2-211ENST00000523549 BRD8Q9H0E9 1235 aa3.88□□□□□ -1.79
NSMCE2-211ENST00000523549 ELAC1Q9H777 363 aaKnown RBP3.88□□□□□ -1.79
NSMCE2-211ENST00000523549 SEPSECSQ9HD40 501 aaKnown RBP3.88□□□□□ -1.79
NSMCE2-211ENST00000523549 WDR6Q9NNW5 1121 aaKnown RBP3.88□□□□□ -1.79
NSMCE2-211ENST00000523549 ARFGAP3Q9NP61 516 aa3.88□□□□□ -1.79
NSMCE2-211ENST00000523549 PRDM8Q9NQV8 689 aa3.88□□□□□ -1.79
NSMCE2-211ENST00000523549 CHST12Q9NRB3 414 aa3.88□□□□□ -1.79
NSMCE2-211ENST00000523549 ADAM18Q9Y3Q7 739 aa3.88□□□□□ -1.79
NSMCE2-211ENST00000523549 FLT1P17948 1338 aa3.88□□□□□ -1.79
NSMCE2-211ENST00000523549 VPS13CQ709C8 3753 aa3.88□□□□□ -1.79
NSMCE2-211ENST00000523549 PI4KAP2A4QPH2 592 aa3.87□□□□□ -1.79
NSMCE2-211ENST00000523549 ASB14A6NK59 587 aa3.87□□□□□ -1.79
NSMCE2-211ENST00000523549 TULP2O00295 520 aa3.87□□□□□ -1.79
NSMCE2-211ENST00000523549 PLK4O00444 970 aa3.87□□□□□ -1.79
NSMCE2-211ENST00000523549 HNRNPRO43390 633 aaKnown RBP3.87□□□□□ -1.79
NSMCE2-211ENST00000523549 PRC1O43663 620 aa3.87□□□□□ -1.79
NSMCE2-211ENST00000523549 ACTL6BO94805 426 aa3.87□□□□□ -1.79
NSMCE2-211ENST00000523549 RNF224P0DH78 156 aa3.87□□□□□ -1.79
NSMCE2-211ENST00000523549 GHRP10912 638 aa3.87□□□□□ -1.79
NSMCE2-211ENST00000523549 SERPINA4P29622 427 aa3.87□□□□□ -1.79
NSMCE2-211ENST00000523549 CXCR3P49682 368 aa3.87□□□□□ -1.79
NSMCE2-211ENST00000523549 CRIP2P52943 208 aaPredicted RBP3.87□□□□□ -1.79
NSMCE2-211ENST00000523549 AP2B1P63010 937 aa3.87□□□□□ -1.79
NSMCE2-211ENST00000523549 MECOMQ03112 1051 aa3.87□□□□□ -1.79
NSMCE2-211ENST00000523549 ACSM2AQ08AH3 577 aa3.87□□□□□ -1.79
NSMCE2-211ENST00000523549 NEXNQ0ZGT2 675 aa3.87□□□□□ -1.79
NSMCE2-211ENST00000523549 G3BP1Q13283 466 aaKnown RBP eCLIP3.87□□□□□ -1.79
NSMCE2-211ENST00000523549 RPS6KA2Q15349 733 aa3.87□□□□□ -1.79
NSMCE2-211ENST00000523549 AADACL2Q6P093 401 aa3.87□□□□□ -1.79
NSMCE2-211ENST00000523549 TATDN1Q6P1N9 297 aa3.87□□□□□ -1.79
NSMCE2-211ENST00000523549 Q6ZS52 159 aa3.87□□□□□ -1.79
NSMCE2-211ENST00000523549 GALNT7Q86SF2 657 aa3.87□□□□□ -1.79
NSMCE2-211ENST00000523549 SERINC5Q86VE9 423 aa3.87□□□□□ -1.79
NSMCE2-211ENST00000523549 DCUN1D3Q8IWE4 304 aa3.87□□□□□ -1.79
NSMCE2-211ENST00000523549 PI4KAP1Q8N8J0 262 aa3.87□□□□□ -1.79
NSMCE2-211ENST00000523549 PTGR2Q8N8N7 351 aaPredicted RBP3.87□□□□□ -1.79
NSMCE2-211ENST00000523549 SCAMP5Q8TAC9 235 aa3.87□□□□□ -1.79
NSMCE2-211ENST00000523549 CPT1BQ92523 772 aa3.87□□□□□ -1.79
NSMCE2-211ENST00000523549 MOCOSQ96EN8 888 aa3.87□□□□□ -1.79
NSMCE2-211ENST00000523549 PGLYRP2Q96PD5 576 aa3.87□□□□□ -1.79
NSMCE2-211ENST00000523549 TEFMQ96QE5 360 aaKnown RBP3.87□□□□□ -1.79
NSMCE2-211ENST00000523549 KXD1Q9BQD3 176 aa3.87□□□□□ -1.79
NSMCE2-211ENST00000523549 ARNT2Q9HBZ2 717 aa3.87□□□□□ -1.79
NSMCE2-211ENST00000523549 NLRC4Q9NPP4 1024 aa3.87□□□□□ -1.79
NSMCE2-211ENST00000523549 KNSTRNQ9Y448 316 aa3.87□□□□□ -1.79
NSMCE2-211ENST00000523549 RAD50Q92878 1312 aa3.87□□□□□ -1.79
NSMCE2-211ENST00000523549 PTPRDP23468 1912 aa3.87□□□□□ -1.79
NSMCE2-211ENST00000523549 ZFC3H1O60293 1989 aaKnown RBP3.87□□□□□ -1.79
NSMCE2-211ENST00000523549 MYH4Q9Y623 1939 aa3.86□□□□□ -1.79
NSMCE2-211ENST00000523549 IGLV5-37A0A075B6J1 123 aa3.86□□□□□ -1.79
NSMCE2-211ENST00000523549 A0A1B0GVY2 172 aa3.86□□□□□ -1.79
NSMCE2-211ENST00000523549 SERINC4A6NH21 518 aa3.86□□□□□ -1.79
NSMCE2-211ENST00000523549 EYA2O00167 538 aa3.86□□□□□ -1.79
NSMCE2-211ENST00000523549 SYT5O00445 386 aa3.86□□□□□ -1.79
NSMCE2-211ENST00000523549 ITM2AO43736 263 aa3.86□□□□□ -1.79
NSMCE2-211ENST00000523549 SH3BP5O60239 455 aa3.86□□□□□ -1.79
NSMCE2-211ENST00000523549 CCNT1O60563 726 aaKnown RBP3.86□□□□□ -1.79
NSMCE2-211ENST00000523549 LMX1BO60663 402 aa3.86□□□□□ -1.79
NSMCE2-211ENST00000523549 SERPINI2O75830 405 aa3.86□□□□□ -1.79
NSMCE2-211ENST00000523549 MYL1P05976 194 aa3.86□□□□□ -1.79
NSMCE2-211ENST00000523549 IFIT1P09914 478 aaKnown RBP3.86□□□□□ -1.79
NSMCE2-211ENST00000523549 ZNF286BP0CG31 522 aa3.86□□□□□ -1.79
NSMCE2-211ENST00000523549 RFC1P35251 1148 aaPredicted RBP3.86□□□□□ -1.79
NSMCE2-211ENST00000523549 PNLIPRP1P54315 467 aa3.86□□□□□ -1.79
NSMCE2-211ENST00000523549 MYBPC2Q14324 1141 aa3.86□□□□□ -1.79
NSMCE2-211ENST00000523549 PFKFB4Q16877 469 aa3.86□□□□□ -1.79
NSMCE2-211ENST00000523549 TMEM268Q5VZI3 342 aa3.86□□□□□ -1.79
NSMCE2-211ENST00000523549 DGAT2L7PQ6IED9 249 aa3.86□□□□□ -1.79
NSMCE2-211ENST00000523549 RETSATQ6NUM9 610 aa3.86□□□□□ -1.79
NSMCE2-211ENST00000523549 EXOC3L1Q86VI1 746 aa3.86□□□□□ -1.79
NSMCE2-211ENST00000523549 NAGSQ8N159 534 aa3.86□□□□□ -1.79
NSMCE2-211ENST00000523549 SPEM1Q8N4L4 309 aa3.86□□□□□ -1.79
NSMCE2-211ENST00000523549 HDDC3Q8N4P3 179 aa3.86□□□□□ -1.79
NSMCE2-211ENST00000523549 ZNF527Q8NB42 609 aa3.86□□□□□ -1.79
NSMCE2-211ENST00000523549 POC1AQ8NBT0 407 aa3.86□□□□□ -1.79
NSMCE2-211ENST00000523549 SPATA20Q8TB22 786 aa3.86□□□□□ -1.79
NSMCE2-211ENST00000523549 STAMQ92783 540 aa3.86□□□□□ -1.79
NSMCE2-211ENST00000523549 ADGRG7Q96K78 797 aa3.86□□□□□ -1.79
NSMCE2-211ENST00000523549 IL17FQ96PD4 163 aa3.86□□□□□ -1.79
NSMCE2-211ENST00000523549 C1QTNF5Q9BXJ0 243 aa3.86□□□□□ -1.79
NSMCE2-211ENST00000523549 PABPC3Q9H361 631 aaKnown RBP3.86□□□□□ -1.79
NSMCE2-211ENST00000523549 TMLHEQ9NVH6 421 aa3.86□□□□□ -1.79
NSMCE2-211ENST00000523549 NDUFAF4Q9P032 175 aa3.86□□□□□ -1.79
NSMCE2-211ENST00000523549 UPB1Q9UBR1 384 aa3.86□□□□□ -1.79
NSMCE2-211ENST00000523549 KLQ9UEF7 1012 aa3.86□□□□□ -1.79
NSMCE2-211ENST00000523549 BAG5Q9UL15 447 aa3.86□□□□□ -1.79
NSMCE2-211ENST00000523549 MEGF8Q7Z7M0 2845 aa3.86□□□□□ -1.79
NSMCE2-211ENST00000523549 MXRA5Q9NR99 2828 aa3.86□□□□□ -1.79
NSMCE2-211ENST00000523549 NSD1Q96L73 2696 aaPredicted RBP3.86□□□□□ -1.79
NSMCE2-211ENST00000523549 DOCK5Q9H7D0 1870 aa3.86□□□□□ -1.79
NSMCE2-211ENST00000523549 A0A0U1RQJ8 604 aa3.85□□□□□ -1.79
NSMCE2-211ENST00000523549 MAGEA13PA6NCF6 341 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms