RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 QPCTQ16769 361 aa11.37□□□□□ -0.59
SDCBP-211ENST00000523441 ANO6Q4KMQ2 910 aa11.37□□□□□ -0.59
SDCBP-211ENST00000523441 KHDC1Q4VXA5 237 aaKnown RBP11.37□□□□□ -0.59
SDCBP-211ENST00000523441 PLEKHS1Q5SXH7 462 aa11.37□□□□□ -0.59
SDCBP-211ENST00000523441 TMTC4Q5T4D3 741 aa11.37□□□□□ -0.59
SDCBP-211ENST00000523441 VWA5B1Q5TIE3 1220 aa11.37□□□□□ -0.59
SDCBP-211ENST00000523441 MLIPQ5VWP3 458 aa11.37□□□□□ -0.59
SDCBP-211ENST00000523441 IZUMO3Q5VZ72 239 aa11.37□□□□□ -0.59
SDCBP-211ENST00000523441 TXNRD3NBQ6F5E7 133 aa11.37□□□□□ -0.59
SDCBP-211ENST00000523441 ARMC6Q6NXE6 501 aa11.37□□□□□ -0.59
SDCBP-211ENST00000523441 DUS1LQ6P1R4 473 aaKnown RBP11.37□□□□□ -0.59
SDCBP-211ENST00000523441 MED25Q71SY5 747 aa11.37□□□□□ -0.59
SDCBP-211ENST00000523441 POLNQ7Z5Q5 900 aa11.37□□□□□ -0.59
SDCBP-211ENST00000523441 CUZD1Q86UP6 607 aa11.37□□□□□ -0.59
SDCBP-211ENST00000523441 DSELQ8IZU8 1212 aa11.37□□□□□ -0.59
SDCBP-211ENST00000523441 UBE2Q2Q8WVN8 375 aa11.37□□□□□ -0.59
SDCBP-211ENST00000523441 ZNF501Q96CX3 271 aaPredicted RBP11.37□□□□□ -0.59
SDCBP-211ENST00000523441 SMAD5Q99717 465 aaKnown RBP11.37□□□□□ -0.59
SDCBP-211ENST00000523441 TUBB2BQ9BVA1 445 aa11.37□□□□□ -0.59
SDCBP-211ENST00000523441 KLHL25Q9H0H3 589 aa11.37□□□□□ -0.59
SDCBP-211ENST00000523441 AGPAT4Q9NRZ5 378 aa11.37□□□□□ -0.59
SDCBP-211ENST00000523441 HRASLS2Q9NWW9 162 aa11.37□□□□□ -0.59
SDCBP-211ENST00000523441 DNPEPQ9ULA0 475 aa11.37□□□□□ -0.59
SDCBP-211ENST00000523441 CSAG2Q9Y5P2 127 aa11.37□□□□□ -0.59
SDCBP-211ENST00000523441 ADGRG1Q9Y653 693 aa11.37□□□□□ -0.59
SDCBP-211ENST00000523441 FER1L5A0AVI2 2057 aa11.36□□□□□ -0.59
SDCBP-211ENST00000523441 OR6C74A6NCV1 312 aa11.36□□□□□ -0.59
SDCBP-211ENST00000523441 TMEM150CB9EJG8 249 aa11.36□□□□□ -0.59
SDCBP-211ENST00000523441 MFSD11O43934 449 aa11.36□□□□□ -0.59
SDCBP-211ENST00000523441 ALOX12BO75342 701 aa11.36□□□□□ -0.59
SDCBP-211ENST00000523441 HLA-DQB2P05538 268 aa11.36□□□□□ -0.59
SDCBP-211ENST00000523441 CYP2A7P20853 494 aa11.36□□□□□ -0.59
SDCBP-211ENST00000523441 CA4P22748 312 aa11.36□□□□□ -0.59
SDCBP-211ENST00000523441 FECHP22830 423 aa11.36□□□□□ -0.59
SDCBP-211ENST00000523441 EEF1GP26641 437 aaKnown RBP11.36□□□□□ -0.59
SDCBP-211ENST00000523441 SERPINB6P35237 376 aa11.36□□□□□ -0.59
SDCBP-211ENST00000523441 ZNF165P49910 485 aa11.36□□□□□ -0.59
SDCBP-211ENST00000523441 CLCNKAP51800 687 aa11.36□□□□□ -0.59
SDCBP-211ENST00000523441 GSDMDP57764 484 aa11.36□□□□□ -0.59
SDCBP-211ENST00000523441 XRCC4Q13426 336 aa11.36□□□□□ -0.59
SDCBP-211ENST00000523441 GTF2H3Q13889 308 aa11.36□□□□□ -0.59
SDCBP-211ENST00000523441 SLC9A5Q14940 896 aa11.36□□□□□ -0.59
SDCBP-211ENST00000523441 PCSK7Q16549 785 aa11.36□□□□□ -0.59
SDCBP-211ENST00000523441 HIF1AQ16665 826 aa11.36□□□□□ -0.59
SDCBP-211ENST00000523441 KLHL35Q6PF15 583 aa11.36□□□□□ -0.59
SDCBP-211ENST00000523441 ABRAXAS1Q6UWZ7 409 aa11.36□□□□□ -0.59
SDCBP-211ENST00000523441 RAB43Q86YS6 212 aa11.36□□□□□ -0.59
SDCBP-211ENST00000523441 HPS6Q86YV9 775 aa11.36□□□□□ -0.59
SDCBP-211ENST00000523441 ZNF547Q8IVP9 402 aa11.36□□□□□ -0.59
SDCBP-211ENST00000523441 SYTL1Q8IYJ3 562 aa11.36□□□□□ -0.59
SDCBP-211ENST00000523441 ZADH2Q8N4Q0 377 aa11.36□□□□□ -0.59
SDCBP-211ENST00000523441 GLIS1Q8NBF1 620 aa11.36□□□□□ -0.59
SDCBP-211ENST00000523441 CLEC1AQ8NC01 280 aa11.36□□□□□ -0.59
SDCBP-211ENST00000523441 CPT1BQ92523 772 aa11.36□□□□□ -0.59
SDCBP-211ENST00000523441 GLYATL1Q969I3 302 aa11.36□□□□□ -0.59
SDCBP-211ENST00000523441 CNDP1Q96KN2 507 aa11.36□□□□□ -0.59
SDCBP-211ENST00000523441 FCRL4Q96PJ5 515 aa11.36□□□□□ -0.59
SDCBP-211ENST00000523441 TIMM29Q9BSF4 260 aa11.36□□□□□ -0.59
SDCBP-211ENST00000523441 NLNQ9BYT8 704 aa11.36□□□□□ -0.59
SDCBP-211ENST00000523441 GPR63Q9BZJ6 419 aa11.36□□□□□ -0.59
SDCBP-211ENST00000523441 ACTR5Q9H9F9 607 aaPredicted RBP11.36□□□□□ -0.59
SDCBP-211ENST00000523441 FANCEQ9HB96 536 aa11.36□□□□□ -0.59
SDCBP-211ENST00000523441 ZFYVE1Q9HBF4 777 aa11.36□□□□□ -0.59
SDCBP-211ENST00000523441 BPIFA1Q9NP55 256 aa11.36□□□□□ -0.59
SDCBP-211ENST00000523441 EPHA6Q9UF33 1036 aa11.36□□□□□ -0.59
SDCBP-211ENST00000523441 TMEM191CA6NGB0 347 aa11.35□□□□□ -0.59
SDCBP-211ENST00000523441 TLCD2A6NGC4 264 aa11.35□□□□□ -0.59
SDCBP-211ENST00000523441 SLC9B1P1A6NJY1 282 aa11.35□□□□□ -0.59
SDCBP-211ENST00000523441 ALPPP05187 535 aa11.35□□□□□ -0.59
SDCBP-211ENST00000523441 RAB40ALP0C0E4 278 aa11.35□□□□□ -0.59
SDCBP-211ENST00000523441 RARAP10276 462 aa11.35□□□□□ -0.59
SDCBP-211ENST00000523441 VCLP18206 1134 aa11.35□□□□□ -0.59
SDCBP-211ENST00000523441 POLR2CP19387 275 aaPredicted RBP11.35□□□□□ -0.59
SDCBP-211ENST00000523441 RPE65Q16518 533 aa11.35□□□□□ -0.59
SDCBP-211ENST00000523441 C1orf189Q5VU69 101 aa11.35□□□□□ -0.59
SDCBP-211ENST00000523441 FAM198BQ6UWH4 519 aa11.35□□□□□ -0.59
SDCBP-211ENST00000523441 KCNMB4Q86W47 210 aa11.35□□□□□ -0.59
SDCBP-211ENST00000523441 BPHLQ86WA6 291 aaPredicted RBP11.35□□□□□ -0.59
SDCBP-211ENST00000523441 RBM12BQ8IXT5 1001 aaKnown RBP11.35□□□□□ -0.59
SDCBP-211ENST00000523441 GALNT16Q8N428 558 aa11.35□□□□□ -0.59
SDCBP-211ENST00000523441 D2HGDHQ8N465 521 aa11.35□□□□□ -0.59
SDCBP-211ENST00000523441 ST6GALNAC3Q8NDV1 305 aa11.35□□□□□ -0.59
SDCBP-211ENST00000523441 OR1L3Q8NH93 324 aa11.35□□□□□ -0.59
SDCBP-211ENST00000523441 NAT14Q8WUY8 206 aa11.35□□□□□ -0.59
SDCBP-211ENST00000523441 EID2BQ96D98 161 aa11.35□□□□□ -0.59
SDCBP-211ENST00000523441 TTC25Q96NG3 672 aa11.35□□□□□ -0.59
SDCBP-211ENST00000523441 ZSCAN5AQ9BUG6 496 aa11.35□□□□□ -0.59
SDCBP-211ENST00000523441 NUP85Q9BW27 656 aa11.35□□□□□ -0.59
SDCBP-211ENST00000523441 CEP41Q9BYV8 373 aa11.35□□□□□ -0.59
SDCBP-211ENST00000523441 DEF6Q9H4E7 631 aa11.35□□□□□ -0.59
SDCBP-211ENST00000523441 RUBCNLQ9H714 662 aa11.35□□□□□ -0.59
SDCBP-211ENST00000523441 COPG2Q9UBF2 871 aa11.35□□□□□ -0.59
SDCBP-211ENST00000523441 NF1P21359 2839 aa11.35□□□□□ -0.59
SDCBP-211ENST00000523441 HIVEP1P15822 2718 aa11.35□□□□□ -0.59
SDCBP-211ENST00000523441 MED13LQ71F56 2210 aa11.35□□□□□ -0.59
SDCBP-211ENST00000523441 TACC2O95359 2948 aa11.34□□□□□ -0.59
SDCBP-211ENST00000523441 OR5K3A6NET4 321 aa11.34□□□□□ -0.59
SDCBP-211ENST00000523441 OR2AG2A6NM03 316 aa11.34□□□□□ -0.59
SDCBP-211ENST00000523441 ANKRD66B4E2M5 251 aa11.34□□□□□ -0.59
SDCBP-211ENST00000523441 C9J4A7 227 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 239.9 ms