RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 GRK6P43250 576 aa11.76□□□□□ -0.53
PVT1-215ENST00000522963 RXRGP48443 463 aa11.76□□□□□ -0.53
PVT1-215ENST00000522963 CD151P48509 253 aa11.76□□□□□ -0.53
PVT1-215ENST00000522963 CTSCP53634 463 aa11.76□□□□□ -0.53
PVT1-215ENST00000522963 EIF2B5Q13144 721 aaKnown RBP11.76□□□□□ -0.53
PVT1-215ENST00000522963 TRIP6Q15654 476 aaKnown RBP11.76□□□□□ -0.53
PVT1-215ENST00000522963 CTSL3PQ5NE16 218 aa11.76□□□□□ -0.53
PVT1-215ENST00000522963 N4BP2L1Q5TBK1 243 aaPredicted RBP11.76□□□□□ -0.53
PVT1-215ENST00000522963 DET1Q7L5Y6 550 aa11.76□□□□□ -0.53
PVT1-215ENST00000522963 HID1Q8IV36 788 aa11.76□□□□□ -0.53
PVT1-215ENST00000522963 CLDN19Q8N6F1 224 aa11.76□□□□□ -0.53
PVT1-215ENST00000522963 RASGEF1AQ8N9B8 481 aa11.76□□□□□ -0.53
PVT1-215ENST00000522963 LMX1AQ8TE12 382 aa11.76□□□□□ -0.53
PVT1-215ENST00000522963 SAP25Q8TEE9 199 aa11.76□□□□□ -0.53
PVT1-215ENST00000522963 HEXDCQ8WVB3 486 aa11.76□□□□□ -0.53
PVT1-215ENST00000522963 SLC44A1Q8WWI5 657 aa11.76□□□□□ -0.53
PVT1-215ENST00000522963 TSACCQ96A04 125 aaPredicted RBP11.76□□□□□ -0.53
PVT1-215ENST00000522963 WDR92Q96MX6 357 aa11.76□□□□□ -0.53
PVT1-215ENST00000522963 DHRS4Q9BTZ2 278 aa11.76□□□□□ -0.53
PVT1-215ENST00000522963 P2RY12Q9H244 342 aa11.76□□□□□ -0.53
PVT1-215ENST00000522963 TCEAL2Q9H3H9 227 aaPredicted RBP11.76□□□□□ -0.53
PVT1-215ENST00000522963 UCKL1Q9NWZ5 548 aa11.76□□□□□ -0.53
PVT1-215ENST00000522963 PCOLCE2Q9UKZ9 415 aa11.76□□□□□ -0.53
PVT1-215ENST00000522963 VPS9D1Q9Y2B5 631 aa11.76□□□□□ -0.53
PVT1-215ENST00000522963 SLC17A4Q9Y2C5 497 aa11.76□□□□□ -0.53
PVT1-215ENST00000522963 PCYT1BQ9Y5K3 369 aaPredicted RBP11.76□□□□□ -0.53
PVT1-215ENST00000522963 NFS1Q9Y697 457 aa11.76□□□□□ -0.53
PVT1-215ENST00000522963 ZNF106Q9H2Y7 1883 aaKnown RBP11.75□□□□□ -0.53
PVT1-215ENST00000522963 VEGFDO43915 354 aa11.75□□□□□ -0.53
PVT1-215ENST00000522963 NUAK1O60285 661 aa11.75□□□□□ -0.53
PVT1-215ENST00000522963 DNAJC6O75061 913 aa11.75□□□□□ -0.53
PVT1-215ENST00000522963 PIAS2O75928 621 aa11.75□□□□□ -0.53
PVT1-215ENST00000522963 RALBP11234 206 aa11.75□□□□□ -0.53
PVT1-215ENST00000522963 DGKAP23743 735 aa11.75□□□□□ -0.53
PVT1-215ENST00000522963 MSH2P43246 934 aa11.75□□□□□ -0.53
PVT1-215ENST00000522963 CSE1LP55060 971 aaKnown RBP11.75□□□□□ -0.53
PVT1-215ENST00000522963 ADARP55265 1226 aaKnown RBP11.75□□□□□ -0.53
PVT1-215ENST00000522963 EIF3BP55884 814 aaKnown RBP11.75□□□□□ -0.53
PVT1-215ENST00000522963 HNRNPKP61978 463 aaKnown RBP eCLIP11.75□□□□□ -0.535e-7■■■□□ 15.8
PVT1-215ENST00000522963 PPARDQ03181 441 aa11.75□□□□□ -0.53
PVT1-215ENST00000522963 C1orf61Q13536 156 aa11.75□□□□□ -0.53
PVT1-215ENST00000522963 GTF2H3Q13889 308 aa11.75□□□□□ -0.53
PVT1-215ENST00000522963 CASP8Q14790 479 aa11.75□□□□□ -0.53
PVT1-215ENST00000522963 RBM20Q5T481 1227 aaKnown RBP11.75□□□□□ -0.53
PVT1-215ENST00000522963 GRTP1Q5TC63 336 aa11.75□□□□□ -0.53
PVT1-215ENST00000522963 ZNF549Q6P9A3 640 aa11.75□□□□□ -0.53
PVT1-215ENST00000522963 TMEM220Q6QAJ8 160 aa11.75□□□□□ -0.53
PVT1-215ENST00000522963 MACC1Q6ZN28 852 aa11.75□□□□□ -0.53
PVT1-215ENST00000522963 ERMP1Q7Z2K6 904 aa11.75□□□□□ -0.53
PVT1-215ENST00000522963 ZC3HC1Q86WB0 502 aaKnown RBP11.75□□□□□ -0.53
PVT1-215ENST00000522963 PHACTR4Q8IZ21 702 aa11.75□□□□□ -0.53
PVT1-215ENST00000522963 IQCKQ8N0W5 287 aa11.75□□□□□ -0.53
PVT1-215ENST00000522963 OR56A4Q8NGH8 313 aa11.75□□□□□ -0.53
PVT1-215ENST00000522963 DCAKDQ8WVC6 231 aa11.75□□□□□ -0.53
PVT1-215ENST00000522963 OR1E3Q8WZA6 343 aa11.75□□□□□ -0.53
PVT1-215ENST00000522963 ANKRD7Q92527 254 aa11.75□□□□□ -0.53
PVT1-215ENST00000522963 SGF29Q96ES7 293 aa11.75□□□□□ -0.53
PVT1-215ENST00000522963 ATXN7L3BQ96GX2 97 aa11.75□□□□□ -0.53
PVT1-215ENST00000522963 BIRC8Q96P09 236 aa11.75□□□□□ -0.53
PVT1-215ENST00000522963 RBBP8Q99708 897 aa11.75□□□□□ -0.53
PVT1-215ENST00000522963 CCDC77Q9BR77 488 aa11.75□□□□□ -0.53
PVT1-215ENST00000522963 SLC13A1Q9BZW2 595 aa11.75□□□□□ -0.53
PVT1-215ENST00000522963 ZCCHC2Q9C0B9 1178 aaKnown RBP11.75□□□□□ -0.53
PVT1-215ENST00000522963 CLPBQ9H078 707 aa11.75□□□□□ -0.53
PVT1-215ENST00000522963 RHOJQ9H4E5 214 aa11.75□□□□□ -0.53
PVT1-215ENST00000522963 FGF22Q9HCT0 170 aa11.75□□□□□ -0.53
PVT1-215ENST00000522963 MRPL40Q9NQ50 206 aaKnown RBP11.75□□□□□ -0.53
PVT1-215ENST00000522963 TXNDC16Q9P2K2 825 aa11.75□□□□□ -0.53
PVT1-215ENST00000522963 KLQ9UEF7 1012 aa11.75□□□□□ -0.53
PVT1-215ENST00000522963 FTSJ1Q9UET6 329 aa11.75□□□□□ -0.53
PVT1-215ENST00000522963 FETUBQ9UGM5 382 aa11.75□□□□□ -0.53
PVT1-215ENST00000522963 APOBEC3BQ9UH17 382 aaKnown RBP11.75□□□□□ -0.53
PVT1-215ENST00000522963 KLF15Q9UIH9 416 aa11.75□□□□□ -0.53
PVT1-215ENST00000522963 PNMA8BQ9ULN7 279 aaPredicted RBP11.75□□□□□ -0.53
PVT1-215ENST00000522963 DMXL1Q9Y485 3027 aa11.74□□□□□ -0.53
PVT1-215ENST00000522963 OR2AG2A6NM03 316 aa11.74□□□□□ -0.53
PVT1-215ENST00000522963 IQCF5A8MTL0 148 aa11.74□□□□□ -0.53
PVT1-215ENST00000522963 TNFRSF10CO14798 259 aa11.74□□□□□ -0.53
PVT1-215ENST00000522963 CHUKO15111 745 aa11.74□□□□□ -0.53
PVT1-215ENST00000522963 TCEA3O75764 348 aa11.74□□□□□ -0.53
PVT1-215ENST00000522963 AP2A2O94973 939 aa11.74□□□□□ -0.53
PVT1-215ENST00000522963 LDOC1O95751 146 aaPredicted RBP11.74□□□□□ -0.53
PVT1-215ENST00000522963 CSF2P04141 144 aa11.74□□□□□ -0.53
PVT1-215ENST00000522963 IVLP07476 585 aa11.74□□□□□ -0.53
PVT1-215ENST00000522963 INHBAP08476 426 aa11.74□□□□□ -0.53
PVT1-215ENST00000522963 CTSEP14091 401 aa11.74□□□□□ -0.53
PVT1-215ENST00000522963 PKMP14618 531 aaKnown RBP11.74□□□□□ -0.53
PVT1-215ENST00000522963 NME1P15531 152 aaKnown RBP11.74□□□□□ -0.53
PVT1-215ENST00000522963 KELP23276 732 aa11.74□□□□□ -0.53
PVT1-215ENST00000522963 SPRP35270 261 aaPredicted RBP11.74□□□□□ -0.53
PVT1-215ENST00000522963 SLCO1A2P46721 670 aa11.74□□□□□ -0.53
PVT1-215ENST00000522963 LIMK2P53671 638 aa11.74□□□□□ -0.53
PVT1-215ENST00000522963 IFFO1Q0D2I5 559 aa11.74□□□□□ -0.53
PVT1-215ENST00000522963 FOXC1Q12948 553 aa11.74□□□□□ -0.53
PVT1-215ENST00000522963 ALG11Q2TAA5 492 aa11.74□□□□□ -0.53
PVT1-215ENST00000522963 BCL7AQ4VC05 210 aa11.74□□□□□ -0.53
PVT1-215ENST00000522963 PRRT3Q5FWE3 981 aa11.74□□□□□ -0.53
PVT1-215ENST00000522963 ADGRD1Q6QNK2 874 aa11.74□□□□□ -0.53
PVT1-215ENST00000522963 CRTC3Q6UUV7 619 aa11.74□□□□□ -0.53
PVT1-215ENST00000522963 ZNF547Q8IVP9 402 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms