RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 TMEM121Q9BTD3 319 aa18.35■□□□□ 0.53
SPIDR-220ENST00000522900 FAM96AQ9H5X1 160 aa18.35■□□□□ 0.53
SPIDR-220ENST00000522900 ASB8Q9H765 288 aa18.35■□□□□ 0.53
SPIDR-220ENST00000522900 ARNT2Q9HBZ2 717 aa18.35■□□□□ 0.53
SPIDR-220ENST00000522900 PSMD13Q9UNM6 376 aa18.35■□□□□ 0.53
SPIDR-220ENST00000522900 ATMQ13315 3056 aa18.35■□□□□ 0.53
SPIDR-220ENST00000522900 B4E171 279 aa18.34■□□□□ 0.53
SPIDR-220ENST00000522900 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.34■□□□□ 0.53
SPIDR-220ENST00000522900 UBXN7O94888 489 aa18.34■□□□□ 0.53
SPIDR-220ENST00000522900 TPH1P17752 444 aa18.34■□□□□ 0.53
SPIDR-220ENST00000522900 VCLP18206 1134 aa18.34■□□□□ 0.53
SPIDR-220ENST00000522900 MSH3P20585 1137 aa18.34■□□□□ 0.53
SPIDR-220ENST00000522900 CD82P27701 267 aa18.34■□□□□ 0.53
SPIDR-220ENST00000522900 AKT1P31749 480 aa18.34■□□□□ 0.53
SPIDR-220ENST00000522900 TSPAN7P41732 249 aa18.34■□□□□ 0.53
SPIDR-220ENST00000522900 GPR18Q14330 331 aa18.34■□□□□ 0.53
SPIDR-220ENST00000522900 TAF1BQ53T94 588 aaPredicted RBP18.34■□□□□ 0.53
SPIDR-220ENST00000522900 MANEAQ5SRI9 462 aa18.34■□□□□ 0.53
SPIDR-220ENST00000522900 FNBP1LQ5T0N5 605 aa18.34■□□□□ 0.53
SPIDR-220ENST00000522900 ARHGEF18Q6ZSZ5 1173 aa18.34■□□□□ 0.53
SPIDR-220ENST00000522900 TXLNBQ8N3L3 684 aa18.34■□□□□ 0.53
SPIDR-220ENST00000522900 RNF10Q8N5U6 811 aaKnown RBP18.34■□□□□ 0.53
SPIDR-220ENST00000522900 ATG4AQ8WYN0 398 aa18.34■□□□□ 0.53
SPIDR-220ENST00000522900 CXorf40BQ96DE9 158 aa18.34■□□□□ 0.53
SPIDR-220ENST00000522900 DDA1Q9BW61 102 aa18.34■□□□□ 0.53
SPIDR-220ENST00000522900 ZCCHC2Q9C0B9 1178 aaKnown RBP18.34■□□□□ 0.53
SPIDR-220ENST00000522900 APMAPQ9HDC9 416 aa18.34■□□□□ 0.53
SPIDR-220ENST00000522900 POT1Q9NUX5 634 aa18.34■□□□□ 0.53
SPIDR-220ENST00000522900 GUCA1BQ9UMX6 200 aa18.34■□□□□ 0.53
SPIDR-220ENST00000522900 PCDHB11Q9Y5F2 797 aa18.34■□□□□ 0.53
SPIDR-220ENST00000522900 STMND1H3BQB6 276 aa18.33■□□□□ 0.52
SPIDR-220ENST00000522900 LDB2O43679 373 aa18.33■□□□□ 0.52
SPIDR-220ENST00000522900 SGTAO43765 313 aa18.33■□□□□ 0.52
SPIDR-220ENST00000522900 KALRNO60229 2985 aa18.33■□□□□ 0.52
SPIDR-220ENST00000522900 CRTAMO95727 393 aa18.33■□□□□ 0.52
SPIDR-220ENST00000522900 AMD1P17707 334 aa18.33■□□□□ 0.52
SPIDR-220ENST00000522900 LEPRP48357 1165 aaKnown RBP18.33■□□□□ 0.52
SPIDR-220ENST00000522900 ZNF140P52738 457 aaPredicted RBP18.33■□□□□ 0.52
SPIDR-220ENST00000522900 MC2RQ01718 297 aa18.33■□□□□ 0.52
SPIDR-220ENST00000522900 DMPKQ09013 629 aa18.33■□□□□ 0.52
SPIDR-220ENST00000522900 DCAF12Q5T6F0 453 aa18.33■□□□□ 0.52
SPIDR-220ENST00000522900 XKR5Q6UX68 686 aa18.33■□□□□ 0.52
SPIDR-220ENST00000522900 PLXDC1Q8IUK5 500 aa18.33■□□□□ 0.52
SPIDR-220ENST00000522900 CCDC112Q8NEF3 446 aa18.33■□□□□ 0.52
SPIDR-220ENST00000522900 GPR150Q8NGU9 434 aa18.33■□□□□ 0.52
SPIDR-220ENST00000522900 NKD1Q969G9 470 aa18.33■□□□□ 0.52
SPIDR-220ENST00000522900 C9orf72Q96LT7 481 aa18.33■□□□□ 0.52
SPIDR-220ENST00000522900 TGM7Q96PF1 710 aa18.33■□□□□ 0.52
SPIDR-220ENST00000522900 SEMA4CQ9C0C4 833 aa18.33■□□□□ 0.52
SPIDR-220ENST00000522900 EPB41L1Q9H4G0 881 aa18.33■□□□□ 0.52
SPIDR-220ENST00000522900 PIH1D1Q9NWS0 290 aaKnown RBP18.33■□□□□ 0.52
SPIDR-220ENST00000522900 DNMT3AQ9Y6K1 912 aaPredicted RBP18.33■□□□□ 0.52
SPIDR-220ENST00000522900 MN1Q10571 1320 aaPredicted RBP18.32■□□□□ 0.52
SPIDR-220ENST00000522900 AGAP14A8MT82 685 aa18.32■□□□□ 0.52
SPIDR-220ENST00000522900 CAPN5O15484 640 aaPredicted RBP18.32■□□□□ 0.52
SPIDR-220ENST00000522900 KIF1CO43896 1103 aaKnown RBP18.32■□□□□ 0.52
SPIDR-220ENST00000522900 KCNJ13O60928 360 aa18.32■□□□□ 0.52
SPIDR-220ENST00000522900 C9P02748 559 aa18.32■□□□□ 0.52
SPIDR-220ENST00000522900 CDKN1CP49918 316 aaPredicted RBP18.32■□□□□ 0.52
SPIDR-220ENST00000522900 LY6DQ14210 128 aa18.32■□□□□ 0.52
SPIDR-220ENST00000522900 RPE65Q16518 533 aa18.32■□□□□ 0.52
SPIDR-220ENST00000522900 METRNLQ641Q3 311 aa18.32■□□□□ 0.52
SPIDR-220ENST00000522900 RSC1A1Q92681 617 aa18.32■□□□□ 0.52
SPIDR-220ENST00000522900 PPP1R2P1Q96PQ5 205 aa18.32■□□□□ 0.52
SPIDR-220ENST00000522900 ASPSCR1Q9BZE9 553 aa18.32■□□□□ 0.52
SPIDR-220ENST00000522900 SPRY4Q9C004 299 aa18.32■□□□□ 0.52
SPIDR-220ENST00000522900 CFAP20Q9Y6A4 193 aaKnown RBP18.32■□□□□ 0.52
SPIDR-220ENST00000522900 MGAT4DA6NG13 374 aa18.31■□□□□ 0.52
SPIDR-220ENST00000522900 PRSS56P0CW18 603 aa18.31■□□□□ 0.52
SPIDR-220ENST00000522900 HALP42357 657 aa18.31■□□□□ 0.52
SPIDR-220ENST00000522900 CYP4F2P78329 520 aa18.31■□□□□ 0.52
SPIDR-220ENST00000522900 LONRF2Q1L5Z9 754 aa18.31■□□□□ 0.52
SPIDR-220ENST00000522900 RTP4Q96DX8 246 aa18.31■□□□□ 0.52
SPIDR-220ENST00000522900 RNF31Q96EP0 1072 aa18.31■□□□□ 0.52
SPIDR-220ENST00000522900 WBP1Q96G27 269 aa18.31■□□□□ 0.52
SPIDR-220ENST00000522900 DNAJC1Q96KC8 554 aaKnown RBP18.31■□□□□ 0.52
SPIDR-220ENST00000522900 FBXO8Q9NRD0 319 aa18.31■□□□□ 0.52
SPIDR-220ENST00000522900 SIDT1Q9NXL6 827 aaKnown RBP18.31■□□□□ 0.52
SPIDR-220ENST00000522900 FAM8A1Q9UBU6 413 aa18.31■□□□□ 0.52
SPIDR-220ENST00000522900 FEZ2Q9UHY8 353 aaPredicted RBP18.31■□□□□ 0.52
SPIDR-220ENST00000522900 PCDHGA4Q9Y5G9 962 aa18.31■□□□□ 0.52
SPIDR-220ENST00000522900 ATRXP46100 2492 aa18.31■□□□□ 0.52
SPIDR-220ENST00000522900 SMG1Q96Q15 3661 aaKnown RBP18.3■□□□□ 0.52
SPIDR-220ENST00000522900 LIASO43766 372 aa18.3■□□□□ 0.52
SPIDR-220ENST00000522900 ZNF189O75820 626 aaPredicted RBP18.3■□□□□ 0.52
SPIDR-220ENST00000522900 SEPHS1P49903 392 aa18.3■□□□□ 0.52
SPIDR-220ENST00000522900 RAB15P59190 212 aa18.3■□□□□ 0.52
SPIDR-220ENST00000522900 PPP1CAP62136 330 aa18.3■□□□□ 0.52
SPIDR-220ENST00000522900 PDE1BQ01064 536 aa18.3■□□□□ 0.52
SPIDR-220ENST00000522900 C19orf57Q0VDD7 668 aa18.3■□□□□ 0.52
SPIDR-220ENST00000522900 PRUNE1Q86TP1 453 aa18.3■□□□□ 0.52
SPIDR-220ENST00000522900 RBM12BQ8IXT5 1001 aaKnown RBP18.3■□□□□ 0.52
SPIDR-220ENST00000522900 NXPE1Q8N323 547 aa18.3■□□□□ 0.52
SPIDR-220ENST00000522900 ZNF843Q8N446 348 aa18.3■□□□□ 0.52
SPIDR-220ENST00000522900 LILRA3Q8N6C8 439 aaPredicted RBP18.3■□□□□ 0.52
SPIDR-220ENST00000522900 SPDYE1Q8NFV5 336 aaPredicted RBP18.3■□□□□ 0.52
SPIDR-220ENST00000522900 OR2L2Q8NH16 312 aa18.3■□□□□ 0.52
SPIDR-220ENST00000522900 C1orf54Q8WWF1 131 aa18.3■□□□□ 0.52
SPIDR-220ENST00000522900 ZNF514Q96K75 400 aaPredicted RBP18.3■□□□□ 0.52
SPIDR-220ENST00000522900 INSM2Q96T92 566 aaPredicted RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms