RNA–Protein interactions for RNA: ENST00000522262.1

CDH12-208, Transcript of cadherin 12, humanhuman

TSL 2 BASIC

Gene CDH12, Length 3,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-208ENST00000522262 TRAPPC5Q8IUR0 188 aa6.6□□□□□ -1.35
CDH12-208ENST00000522262 VRK3Q8IV63 474 aa6.6□□□□□ -1.35
CDH12-208ENST00000522262 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.6□□□□□ -1.35
CDH12-208ENST00000522262 IFT81Q8WYA0 676 aa6.6□□□□□ -1.35
CDH12-208ENST00000522262 SKA1Q96BD8 255 aa6.6□□□□□ -1.35
CDH12-208ENST00000522262 CERS2Q96G23 380 aa6.6□□□□□ -1.35
CDH12-208ENST00000522262 APOLD1Q96LR9 279 aa6.6□□□□□ -1.35
CDH12-208ENST00000522262 SLC13A1Q9BZW2 595 aa6.6□□□□□ -1.35
CDH12-208ENST00000522262 IARS2Q9NSE4 1012 aaKnown RBP6.6□□□□□ -1.35
CDH12-208ENST00000522262 KLC4Q9NSK0 619 aa6.6□□□□□ -1.35
CDH12-208ENST00000522262 C20orf96Q9NUD7 363 aaPredicted RBP6.6□□□□□ -1.35
CDH12-208ENST00000522262 SAMD15Q9P1V8 674 aa6.6□□□□□ -1.35
CDH12-208ENST00000522262 SIRPGQ9P1W8 387 aa6.6□□□□□ -1.35
CDH12-208ENST00000522262 CDYLQ9Y232 598 aa6.6□□□□□ -1.35
CDH12-208ENST00000522262 SPAARA0A1B0GVQ0 90 aa6.6□□□□□ -1.35
CDH12-208ENST00000522262 TCRBV9S1A1TA0A576 114 aa6.6□□□□□ -1.35
CDH12-208ENST00000522262 AP3B1O00203 1094 aa6.6□□□□□ -1.35
CDH12-208ENST00000522262 ZNF7P17097 686 aaPredicted RBP6.6□□□□□ -1.35
CDH12-208ENST00000522262 ITGB6P18564 788 aa6.6□□□□□ -1.35
CDH12-208ENST00000522262 KELP23276 732 aa6.6□□□□□ -1.35
CDH12-208ENST00000522262 PBLDP30039 288 aaPredicted RBP6.6□□□□□ -1.35
CDH12-208ENST00000522262 AKT1P31749 480 aa6.6□□□□□ -1.35
CDH12-208ENST00000522262 CCR7P32248 378 aa6.6□□□□□ -1.35
CDH12-208ENST00000522262 ACTR1BP42025 376 aa6.6□□□□□ -1.35
CDH12-208ENST00000522262 MAZP56270 477 aaKnown RBP6.6□□□□□ -1.35
CDH12-208ENST00000522262 ACTR1AP61163 376 aa6.6□□□□□ -1.35
CDH12-208ENST00000522262 CALCOCO2Q13137 446 aa6.6□□□□□ -1.35
CDH12-208ENST00000522262 SEPT7Q16181 437 aaKnown RBP6.6□□□□□ -1.35
CDH12-208ENST00000522262 LONRF1Q17RB8 773 aa6.6□□□□□ -1.35
CDH12-208ENST00000522262 DNTTIP2Q5QJE6 756 aaKnown RBP6.6□□□□□ -1.35
CDH12-208ENST00000522262 PERM1Q5SV97 790 aa6.6□□□□□ -1.35
CDH12-208ENST00000522262 TEX35Q5T0J7 233 aa6.6□□□□□ -1.35
CDH12-208ENST00000522262 C6orf132Q5T0Z8 1188 aa6.6□□□□□ -1.35
CDH12-208ENST00000522262 NEPROQ6NW34 567 aa6.6□□□□□ -1.35
CDH12-208ENST00000522262 SLCO6A1Q86UG4 719 aa6.6□□□□□ -1.35
CDH12-208ENST00000522262 LRRTM4Q86VH4 590 aa6.6□□□□□ -1.35
CDH12-208ENST00000522262 GPR161Q8N6U8 529 aaKnown RBP6.6□□□□□ -1.35
CDH12-208ENST00000522262 GPR156Q8NFN8 814 aa6.6□□□□□ -1.35
CDH12-208ENST00000522262 FAM136AQ96C01 138 aa6.6□□□□□ -1.35
CDH12-208ENST00000522262 LINC00615Q96LM1 132 aaPredicted RBP6.6□□□□□ -1.35
CDH12-208ENST00000522262 NLGN3Q9NZ94 848 aa6.6□□□□□ -1.35
CDH12-208ENST00000522262 NINJ2Q9NZG7 142 aa6.6□□□□□ -1.35
CDH12-208ENST00000522262 FAM8A1Q9UBU6 413 aa6.6□□□□□ -1.35
CDH12-208ENST00000522262 CRYL1Q9Y2S2 319 aa6.6□□□□□ -1.35
CDH12-208ENST00000522262 PTPRBP23467 1997 aa6.6□□□□□ -1.35
CDH12-208ENST00000522262 MAGEB16A2A368 324 aa6.59□□□□□ -1.35
CDH12-208ENST00000522262 KRT87PA6NCN2 255 aa6.59□□□□□ -1.35
CDH12-208ENST00000522262 OR52A4PA6NMU1 304 aa6.59□□□□□ -1.35
CDH12-208ENST00000522262 SMAPO00193 183 aa6.59□□□□□ -1.35
CDH12-208ENST00000522262 FLRT2O43155 660 aa6.59□□□□□ -1.35
CDH12-208ENST00000522262 NIPSNAP2O75323 286 aa6.59□□□□□ -1.35
CDH12-208ENST00000522262 POP7O75817 140 aaKnown RBP6.59□□□□□ -1.35
CDH12-208ENST00000522262 AHSGP02765 367 aa6.59□□□□□ -1.35
CDH12-208ENST00000522262 POLBP06746 335 aa6.59□□□□□ -1.35
CDH12-208ENST00000522262 MSH3P20585 1137 aa6.59□□□□□ -1.35
CDH12-208ENST00000522262 MAGEA4P43358 317 aa6.59□□□□□ -1.35
CDH12-208ENST00000522262 PREPP48147 710 aa6.59□□□□□ -1.35
CDH12-208ENST00000522262 VSNL1P62760 191 aa6.59□□□□□ -1.35
CDH12-208ENST00000522262 HLTFQ14527 1009 aaKnown RBP eCLIP6.59□□□□□ -1.35
CDH12-208ENST00000522262 FASTKD1Q53R41 847 aaKnown RBP6.59□□□□□ -1.35
CDH12-208ENST00000522262 DNAJC21Q5F1R6 531 aaKnown RBP6.59□□□□□ -1.35
CDH12-208ENST00000522262 RBM20Q5T481 1227 aaKnown RBP6.59□□□□□ -1.35
CDH12-208ENST00000522262 DUS1LQ6P1R4 473 aaKnown RBP6.59□□□□□ -1.35
CDH12-208ENST00000522262 GUSBP11Q6P575 273 aa6.59□□□□□ -1.35
CDH12-208ENST00000522262 CCDC25Q86WR0 208 aa6.59□□□□□ -1.35
CDH12-208ENST00000522262 C2CD4AQ8NCU7 369 aaPredicted RBP6.59□□□□□ -1.35
CDH12-208ENST00000522262 ULK4Q96C45 1275 aa6.59□□□□□ -1.35
CDH12-208ENST00000522262 LRRC39Q96DD0 335 aa6.59□□□□□ -1.35
CDH12-208ENST00000522262 CDC42EP4Q9H3Q1 356 aaKnown RBP6.59□□□□□ -1.35
CDH12-208ENST00000522262 ZNF624Q9P2J8 865 aaPredicted RBP6.59□□□□□ -1.35
CDH12-208ENST00000522262 SPASTQ9UBP0 616 aa6.59□□□□□ -1.35
CDH12-208ENST00000522262 GPR34Q9UPC5 381 aa6.59□□□□□ -1.35
CDH12-208ENST00000522262 CSNK1G3Q9Y6M4 447 aa6.59□□□□□ -1.35
CDH12-208ENST00000522262 TRBV23OR9-2A0A075B6M9 112 aa6.59□□□□□ -1.35
CDH12-208ENST00000522262 B4DGG1 531 aa6.59□□□□□ -1.35
CDH12-208ENST00000522262 GPR89AB7ZAQ6 455 aa6.59□□□□□ -1.35
CDH12-208ENST00000522262 H3BM21 787 aa6.59□□□□□ -1.35
CDH12-208ENST00000522262 DFNA5O60443 496 aa6.59□□□□□ -1.35
CDH12-208ENST00000522262 FAM155BO75949 473 aa6.59□□□□□ -1.35
CDH12-208ENST00000522262 DKK1O94907 266 aa6.59□□□□□ -1.35
CDH12-208ENST00000522262 TOP3BO95985 862 aaKnown RBP6.59□□□□□ -1.35
CDH12-208ENST00000522262 GPR89BP0CG08 455 aa6.59□□□□□ -1.35
CDH12-208ENST00000522262 GMPRP36959 345 aa6.59□□□□□ -1.35
CDH12-208ENST00000522262 NSG1P42857 185 aa6.59□□□□□ -1.35
CDH12-208ENST00000522262 GRK6P43250 576 aa6.59□□□□□ -1.35
CDH12-208ENST00000522262 DMPKQ09013 629 aa6.59□□□□□ -1.35
CDH12-208ENST00000522262 ITIH4Q14624 930 aa6.59□□□□□ -1.35
CDH12-208ENST00000522262 ELOCQ15369 112 aa6.59□□□□□ -1.35
CDH12-208ENST00000522262 KYNUQ16719 465 aa6.59□□□□□ -1.35
CDH12-208ENST00000522262 SPANXN3Q5MJ09 141 aa6.59□□□□□ -1.35
CDH12-208ENST00000522262 ARMC3Q5W041 872 aa6.59□□□□□ -1.35
CDH12-208ENST00000522262 OGFOD3Q6PK18 319 aa6.59□□□□□ -1.35
CDH12-208ENST00000522262 TMPRSS9Q7Z410 1059 aa6.59□□□□□ -1.35
CDH12-208ENST00000522262 TAF8Q7Z7C8 310 aa6.59□□□□□ -1.35
CDH12-208ENST00000522262 ZNF761Q86XN6 746 aaPredicted RBP6.59□□□□□ -1.35
CDH12-208ENST00000522262 MARCH9Q86YJ5 346 aa6.59□□□□□ -1.35
CDH12-208ENST00000522262 BBOF1Q8ND07 529 aa6.59□□□□□ -1.35
CDH12-208ENST00000522262 OR2L2Q8NH16 312 aa6.59□□□□□ -1.35
CDH12-208ENST00000522262 RHBDD1Q8TEB9 315 aa6.59□□□□□ -1.35
CDH12-208ENST00000522262 SLC37A2Q8TED4 501 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms