RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 OR52A4PA6NMU1 304 aa16.74■□□□□ 0.27
SQLE-205ENST00000521232 A8MU76 341 aa16.74■□□□□ 0.27
SQLE-205ENST00000521232 ERVH48-1M5A8F1 160 aa16.74■□□□□ 0.27
SQLE-205ENST00000521232 ARHGAP6O43182 974 aa16.74■□□□□ 0.27
SQLE-205ENST00000521232 LDB2O43679 373 aa16.74■□□□□ 0.27
SQLE-205ENST00000521232 MSH3P20585 1137 aa16.74■□□□□ 0.27
SQLE-205ENST00000521232 STIP1P31948 543 aaKnown RBP16.74■□□□□ 0.27
SQLE-205ENST00000521232 HADHAP40939 763 aa16.74■□□□□ 0.27
SQLE-205ENST00000521232 MAPK9P45984 424 aa16.74■□□□□ 0.27
SQLE-205ENST00000521232 ZNF140P52738 457 aaPredicted RBP16.74■□□□□ 0.27
SQLE-205ENST00000521232 GDF10P55107 478 aa16.74■□□□□ 0.27
SQLE-205ENST00000521232 LONRF2Q1L5Z9 754 aa16.74■□□□□ 0.27
SQLE-205ENST00000521232 SNAP47Q5SQN1 464 aa16.74■□□□□ 0.27
SQLE-205ENST00000521232 PCSK4Q6UW60 755 aa16.74■□□□□ 0.27
SQLE-205ENST00000521232 PLXDC1Q8IUK5 500 aa16.74■□□□□ 0.27
SQLE-205ENST00000521232 OR13C4Q8NGS5 318 aa16.74■□□□□ 0.27
SQLE-205ENST00000521232 SLC39A7Q92504 469 aa16.74■□□□□ 0.27
SQLE-205ENST00000521232 ART4Q93070 314 aa16.74■□□□□ 0.27
SQLE-205ENST00000521232 RTP4Q96DX8 246 aa16.74■□□□□ 0.27
SQLE-205ENST00000521232 WBP1Q96G27 269 aa16.74■□□□□ 0.27
SQLE-205ENST00000521232 ASPSCR1Q9BZE9 553 aa16.74■□□□□ 0.27
SQLE-205ENST00000521232 SLC39A1Q9NY26 324 aa16.74■□□□□ 0.27
SQLE-205ENST00000521232 PCDHB11Q9Y5F2 797 aa16.74■□□□□ 0.27
SQLE-205ENST00000521232 SLC30A1Q9Y6M5 507 aa16.74■□□□□ 0.27
SQLE-205ENST00000521232 PIEZO2Q9H5I5 2752 aa16.74■□□□□ 0.27
SQLE-205ENST00000521232 CFAP46Q8IYW2 2715 aa16.74■□□□□ 0.27
SQLE-205ENST00000521232 MN1Q10571 1320 aaPredicted RBP16.73■□□□□ 0.27
SQLE-205ENST00000521232 OR2AG2A6NM03 316 aa16.73■□□□□ 0.27
SQLE-205ENST00000521232 EFCAB7A8K855 629 aa16.73■□□□□ 0.27
SQLE-205ENST00000521232 PSMD3O43242 534 aa16.73■□□□□ 0.27
SQLE-205ENST00000521232 UBXN7O94888 489 aa16.73■□□□□ 0.27
SQLE-205ENST00000521232 C9P02748 559 aa16.73■□□□□ 0.27
SQLE-205ENST00000521232 HALP42357 657 aa16.73■□□□□ 0.27
SQLE-205ENST00000521232 RAB15P59190 212 aa16.73■□□□□ 0.27
SQLE-205ENST00000521232 MC2RQ01718 297 aa16.73■□□□□ 0.27
SQLE-205ENST00000521232 P3H1Q32P28 736 aa16.73■□□□□ 0.27
SQLE-205ENST00000521232 METRNLQ641Q3 311 aa16.73■□□□□ 0.27
SQLE-205ENST00000521232 FAM83HQ6ZRV2 1179 aaPredicted RBP16.73■□□□□ 0.27
SQLE-205ENST00000521232 ZNF662Q6ZS27 426 aa16.73■□□□□ 0.27
SQLE-205ENST00000521232 PMEPA1Q969W9 287 aa16.73■□□□□ 0.27
SQLE-205ENST00000521232 CXorf40BQ96DE9 158 aa16.73■□□□□ 0.27
SQLE-205ENST00000521232 SGF29Q96ES7 293 aa16.73■□□□□ 0.27
SQLE-205ENST00000521232 FRMD8P1Q9BZ68 369 aaPredicted RBP16.73■□□□□ 0.27
SQLE-205ENST00000521232 LRRC40Q9H9A6 602 aa16.73■□□□□ 0.27
SQLE-205ENST00000521232 B3GALT1Q9Y5Z6 326 aa16.73■□□□□ 0.27
SQLE-205ENST00000521232 BAHCC1Q9P281 2608 aa16.72■□□□□ 0.27
SQLE-205ENST00000521232 KLHL33A6NCF5 533 aa16.72■□□□□ 0.27
SQLE-205ENST00000521232 MGAT4DA6NG13 374 aa16.72■□□□□ 0.27
SQLE-205ENST00000521232 EIF4E1BA6NMX2 242 aaKnown RBP16.72■□□□□ 0.27
SQLE-205ENST00000521232 STMND1H3BQB6 276 aa16.72■□□□□ 0.27
SQLE-205ENST00000521232 AP2A1O95782 977 aa16.72■□□□□ 0.27
SQLE-205ENST00000521232 ANKRD34CP0C6C1 535 aa16.72■□□□□ 0.27
SQLE-205ENST00000521232 TYRP1P17643 537 aa16.72■□□□□ 0.27
SQLE-205ENST00000521232 AMD1P17707 334 aa16.72■□□□□ 0.27
SQLE-205ENST00000521232 AKT1P31749 480 aa16.72■□□□□ 0.27
SQLE-205ENST00000521232 TMPRSS15P98073 1019 aa16.72■□□□□ 0.27
SQLE-205ENST00000521232 GPR18Q14330 331 aa16.72■□□□□ 0.27
SQLE-205ENST00000521232 NFE2L1Q14494 772 aa16.72■□□□□ 0.27
SQLE-205ENST00000521232 OASLQ15646 514 aaKnown RBP16.72■□□□□ 0.27
SQLE-205ENST00000521232 BCL7AQ4VC05 210 aa16.72■□□□□ 0.27
SQLE-205ENST00000521232 FNBP1LQ5T0N5 605 aa16.72■□□□□ 0.27
SQLE-205ENST00000521232 DCAF12Q5T6F0 453 aa16.72■□□□□ 0.27
SQLE-205ENST00000521232 SEL1L2Q5TEA6 688 aa16.72■□□□□ 0.27
SQLE-205ENST00000521232 MEI1Q5TIA1 1274 aa16.72■□□□□ 0.27
SQLE-205ENST00000521232 SNX20Q7Z614 316 aa16.72■□□□□ 0.27
SQLE-205ENST00000521232 FAM129CQ86XR2 697 aa16.72■□□□□ 0.27
SQLE-205ENST00000521232 SLC13A5Q86YT5 568 aaPredicted RBP16.72■□□□□ 0.27
SQLE-205ENST00000521232 OR2L2Q8NH16 312 aa16.72■□□□□ 0.27
SQLE-205ENST00000521232 ULK4Q96C45 1275 aa16.72■□□□□ 0.27
SQLE-205ENST00000521232 LINC00615Q96LM1 132 aaPredicted RBP16.72■□□□□ 0.27
SQLE-205ENST00000521232 C9orf72Q96LT7 481 aa16.72■□□□□ 0.27
SQLE-205ENST00000521232 FBXO8Q9NRD0 319 aa16.72■□□□□ 0.27
SQLE-205ENST00000521232 H7C0S8 307 aa16.71■□□□□ 0.27
SQLE-205ENST00000521232 TOX3O15405 576 aaPredicted RBP16.71■□□□□ 0.27
SQLE-205ENST00000521232 SGTAO43765 313 aa16.71■□□□□ 0.27
SQLE-205ENST00000521232 LIASO43766 372 aa16.71■□□□□ 0.27
SQLE-205ENST00000521232 TPH1P17752 444 aa16.71■□□□□ 0.27
SQLE-205ENST00000521232 SRSF6Q13247 344 aaKnown RBP16.71■□□□□ 0.27
SQLE-205ENST00000521232 RPE65Q16518 533 aa16.71■□□□□ 0.27
SQLE-205ENST00000521232 GPR33Q49SQ1 333 aa16.71■□□□□ 0.27
SQLE-205ENST00000521232 MANEAQ5SRI9 462 aa16.71■□□□□ 0.27
SQLE-205ENST00000521232 DET1Q7L5Y6 550 aa16.71■□□□□ 0.27
SQLE-205ENST00000521232 NXPE1Q8N323 547 aa16.71■□□□□ 0.27
SQLE-205ENST00000521232 BEND7Q8N7W2 519 aaPredicted RBP16.71■□□□□ 0.27
SQLE-205ENST00000521232 HEXDCQ8WVB3 486 aa16.71■□□□□ 0.27
SQLE-205ENST00000521232 ATG4AQ8WYN0 398 aa16.71■□□□□ 0.27
SQLE-205ENST00000521232 TTC9Q92623 222 aa16.71■□□□□ 0.27
SQLE-205ENST00000521232 TEFMQ96QE5 360 aaKnown RBP16.71■□□□□ 0.27
SQLE-205ENST00000521232 ZPBPQ9BS86 351 aa16.71■□□□□ 0.27
SQLE-205ENST00000521232 SPRY4Q9C004 299 aa16.71■□□□□ 0.27
SQLE-205ENST00000521232 RAB33BQ9H082 229 aa16.71■□□□□ 0.27
SQLE-205ENST00000521232 NLE1Q9NVX2 485 aaPredicted RBP16.71■□□□□ 0.27
SQLE-205ENST00000521232 WDR70Q9NW82 654 aa16.71■□□□□ 0.27
SQLE-205ENST00000521232 EPHA6Q9UF33 1036 aa16.71■□□□□ 0.27
SQLE-205ENST00000521232 KLHL3Q9UH77 587 aa16.71■□□□□ 0.27
SQLE-205ENST00000521232 CRLS1Q9UJA2 301 aa16.71■□□□□ 0.27
SQLE-205ENST00000521232 ACSL5Q9ULC5 683 aa16.71■□□□□ 0.27
SQLE-205ENST00000521232 ERI2A8K979 691 aaKnown RBP16.7■□□□□ 0.26
SQLE-205ENST00000521232 CAPN5O15484 640 aaPredicted RBP16.7■□□□□ 0.26
SQLE-205ENST00000521232 RALBP11234 206 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms