RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 HAUS1Q96CS2 278 aa19.27■□□□□ 0.68
PABPC1-215ENST00000520804 UGT1A7Q9HAW7 530 aa19.27■□□□□ 0.68
PABPC1-215ENST00000520804 UGT1A10Q9HAW8 530 aa19.27■□□□□ 0.68
PABPC1-215ENST00000520804 UGT1A8Q9HAW9 530 aa19.27■□□□□ 0.68
PABPC1-215ENST00000520804 TRHDEQ9UKU6 1024 aa19.27■□□□□ 0.68
PABPC1-215ENST00000520804 PKP3Q9Y446 797 aa19.27■□□□□ 0.68
PABPC1-215ENST00000520804 GAPDHSO14556 408 aaPredicted RBP19.26■□□□□ 0.67
PABPC1-215ENST00000520804 BUD23O43709 281 aaKnown RBP19.26■□□□□ 0.67
PABPC1-215ENST00000520804 FGF5P12034 268 aa19.26■□□□□ 0.67
PABPC1-215ENST00000520804 TCN2P20062 427 aa19.26■□□□□ 0.67
PABPC1-215ENST00000520804 F8A1P23610 371 aa19.26■□□□□ 0.67
PABPC1-215ENST00000520804 CTSCP53634 463 aa19.26■□□□□ 0.67
PABPC1-215ENST00000520804 ITGA9Q13797 1035 aa19.26■□□□□ 0.67
PABPC1-215ENST00000520804 GPRC6AQ5T6X5 926 aa19.26■□□□□ 0.67
PABPC1-215ENST00000520804 IRGCQ6NXR0 463 aa19.26■□□□□ 0.67
PABPC1-215ENST00000520804 C6orf15Q6UXA7 325 aaPredicted RBP19.26■□□□□ 0.67
PABPC1-215ENST00000520804 FAM92BQ6ZTR7 304 aa19.26■□□□□ 0.67
PABPC1-215ENST00000520804 CCDC50Q8IVM0 306 aa19.26■□□□□ 0.67
PABPC1-215ENST00000520804 RBM41Q96IZ5 413 aaKnown RBP19.26■□□□□ 0.67
PABPC1-215ENST00000520804 RSPH14Q9UHP6 348 aa19.26■□□□□ 0.67
PABPC1-215ENST00000520804 DNMT3AQ9Y6K1 912 aaPredicted RBP19.26■□□□□ 0.67
PABPC1-215ENST00000520804 GOLGA6L3A6NEY3 463 aa19.25■□□□□ 0.67
PABPC1-215ENST00000520804 NDUFA10O95299 355 aa19.25■□□□□ 0.67
PABPC1-215ENST00000520804 LCA5LO95447 670 aa19.25■□□□□ 0.67
PABPC1-215ENST00000520804 FECHP22830 423 aa19.25■□□□□ 0.67
PABPC1-215ENST00000520804 DLSTP36957 453 aa19.25■□□□□ 0.67
PABPC1-215ENST00000520804 XRCC4Q13426 336 aa19.25■□□□□ 0.67
PABPC1-215ENST00000520804 RPE65Q16518 533 aa19.25■□□□□ 0.67
PABPC1-215ENST00000520804 DEFB109BQ30KR1 87 aa19.25■□□□□ 0.67
PABPC1-215ENST00000520804 C16orf46Q6P387 395 aa19.25■□□□□ 0.67
PABPC1-215ENST00000520804 TMEM220Q6QAJ8 160 aa19.25■□□□□ 0.67
PABPC1-215ENST00000520804 FAM83HQ6ZRV2 1179 aaPredicted RBP19.25■□□□□ 0.67
PABPC1-215ENST00000520804 BBS12Q6ZW61 710 aa19.25■□□□□ 0.67
PABPC1-215ENST00000520804 RASGRP3Q8IV61 690 aa19.25■□□□□ 0.67
PABPC1-215ENST00000520804 TC2NQ8N9U0 490 aa19.25■□□□□ 0.67
PABPC1-215ENST00000520804 GALNT6Q8NCL4 622 aa19.25■□□□□ 0.67
PABPC1-215ENST00000520804 GPR150Q8NGU9 434 aa19.25■□□□□ 0.67
PABPC1-215ENST00000520804 APOBEC4Q8WW27 367 aaKnown RBP19.25■□□□□ 0.67
PABPC1-215ENST00000520804 RNF31Q96EP0 1072 aa19.25■□□□□ 0.67
PABPC1-215ENST00000520804 ELMO2Q96JJ3 720 aa19.25■□□□□ 0.67
PABPC1-215ENST00000520804 FSD1LQ9BXM9 530 aa19.25■□□□□ 0.67
PABPC1-215ENST00000520804 SMOXQ9NWM0 555 aa19.25■□□□□ 0.67
PABPC1-215ENST00000520804 SEMA5BQ9P283 1151 aa19.25■□□□□ 0.67
PABPC1-215ENST00000520804 TFR2Q9UP52 801 aa19.25■□□□□ 0.67
PABPC1-215ENST00000520804 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.25■□□□□ 0.67
PABPC1-215ENST00000520804 MRPS18BQ9Y676 258 aaKnown RBP19.25■□□□□ 0.67
PABPC1-215ENST00000520804 SPTA1P02549 2419 aa19.25■□□□□ 0.67
PABPC1-215ENST00000520804 OR2AG2A6NM03 316 aa19.24■□□□□ 0.67
PABPC1-215ENST00000520804 KIAA0754O94854 1291 aa19.24■□□□□ 0.67
PABPC1-215ENST00000520804 NELFEP18615 380 aaKnown RBP19.24■□□□□ 0.67
PABPC1-215ENST00000520804 TLE1Q04724 770 aa19.24■□□□□ 0.67
PABPC1-215ENST00000520804 NFE2L1Q14494 772 aa19.24■□□□□ 0.67
PABPC1-215ENST00000520804 PTPRCAPQ14761 206 aa19.24■□□□□ 0.67
PABPC1-215ENST00000520804 ATP1A1-AS1Q5TC04 95 aa19.24■□□□□ 0.67
PABPC1-215ENST00000520804 C11orf63Q6NUN7 778 aa19.24■□□□□ 0.67
PABPC1-215ENST00000520804 CYB5D1Q6P9G0 228 aa19.24■□□□□ 0.67
PABPC1-215ENST00000520804 KRT35Q92764 455 aa19.24■□□□□ 0.67
PABPC1-215ENST00000520804 STAMBPL1Q96FJ0 436 aa19.24■□□□□ 0.67
PABPC1-215ENST00000520804 HEMGNQ9BXL5 484 aa19.24■□□□□ 0.67
PABPC1-215ENST00000520804 GBA3Q9H227 469 aa19.24■□□□□ 0.67
PABPC1-215ENST00000520804 CROTQ9UKG9 612 aa19.24■□□□□ 0.67
PABPC1-215ENST00000520804 PSMD13Q9UNM6 376 aa19.24■□□□□ 0.67
PABPC1-215ENST00000520804 PCDHA13Q9Y5I0 950 aa19.24■□□□□ 0.67
PABPC1-215ENST00000520804 APOC4-APOC2K7ER74 178 aa19.23■□□□□ 0.67
PABPC1-215ENST00000520804 STX7O15400 261 aaKnown RBP19.23■□□□□ 0.67
PABPC1-215ENST00000520804 SPAG6O75602 509 aa19.23■□□□□ 0.67
PABPC1-215ENST00000520804 AGTP01019 485 aa19.23■□□□□ 0.67
PABPC1-215ENST00000520804 APOC2P02655 101 aa19.23■□□□□ 0.67
PABPC1-215ENST00000520804 RBL1P28749 1068 aa19.23■□□□□ 0.67
PABPC1-215ENST00000520804 PPP1CAP62136 330 aa19.23■□□□□ 0.67
PABPC1-215ENST00000520804 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.23■□□□□ 0.67
PABPC1-215ENST00000520804 METRNLQ641Q3 311 aa19.23■□□□□ 0.67
PABPC1-215ENST00000520804 KLHL35Q6PF15 583 aa19.23■□□□□ 0.67
PABPC1-215ENST00000520804 PPP1R3BQ86XI6 285 aa19.23■□□□□ 0.67
PABPC1-215ENST00000520804 C9orf43Q8TAL5 461 aaPredicted RBP19.23■□□□□ 0.67
PABPC1-215ENST00000520804 ZNF398Q8TD17 642 aa19.23■□□□□ 0.67
PABPC1-215ENST00000520804 UBXN4Q92575 508 aa19.23■□□□□ 0.67
PABPC1-215ENST00000520804 SLC41A2Q96JW4 573 aa19.23■□□□□ 0.67
PABPC1-215ENST00000520804 ZNF514Q96K75 400 aaPredicted RBP19.23■□□□□ 0.67
PABPC1-215ENST00000520804 GORASP1Q9BQQ3 440 aa19.23■□□□□ 0.67
PABPC1-215ENST00000520804 C10orf88Q9H8K7 445 aa19.23■□□□□ 0.67
PABPC1-215ENST00000520804 IGHV5-51A0A0C4DH38 117 aa19.22■□□□□ 0.67
PABPC1-215ENST00000520804 H7C0C1 242 aa19.22■□□□□ 0.67
PABPC1-215ENST00000520804 ARHGAP6O43182 974 aa19.22■□□□□ 0.67
PABPC1-215ENST00000520804 ANXA9O76027 345 aa19.22■□□□□ 0.67
PABPC1-215ENST00000520804 PRAMEF1O95521 474 aa19.22■□□□□ 0.67
PABPC1-215ENST00000520804 MSH3P20585 1137 aa19.22■□□□□ 0.67
PABPC1-215ENST00000520804 PBLDP30039 288 aaPredicted RBP19.22■□□□□ 0.67
PABPC1-215ENST00000520804 AKT1P31749 480 aa19.22■□□□□ 0.67
PABPC1-215ENST00000520804 ATP5OP48047 213 aa19.22■□□□□ 0.67
PABPC1-215ENST00000520804 GEMP55040 296 aa19.22■□□□□ 0.67
PABPC1-215ENST00000520804 LONRF2Q1L5Z9 754 aa19.22■□□□□ 0.67
PABPC1-215ENST00000520804 FNBP1LQ5T0N5 605 aa19.22■□□□□ 0.67
PABPC1-215ENST00000520804 CCDC170Q8IYT3 715 aa19.22■□□□□ 0.67
PABPC1-215ENST00000520804 ABHD17AQ96GS6 310 aa19.22■□□□□ 0.67
PABPC1-215ENST00000520804 FICDQ9BVA6 458 aa19.22■□□□□ 0.67
PABPC1-215ENST00000520804 ZNF71Q9NQZ8 489 aaPredicted RBP19.22■□□□□ 0.67
PABPC1-215ENST00000520804 LNPEPQ9UIQ6 1025 aa19.22■□□□□ 0.67
PABPC1-215ENST00000520804 KCTD3Q9Y597 815 aa19.22■□□□□ 0.67
PABPC1-215ENST00000520804 PCDHB3Q9Y5E6 796 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms