RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-208	ENST00000520580	CLEC1A	Q8NC01	280 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	CCNY	Q8ND76	341 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	ARRDC2	Q8TBH0	407 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	PROKR1	Q8TCW9	393 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	BICD1	Q96G01	975 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	PANX3	Q96QZ0	392 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	FN3K	Q9H479	309 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	PARPBP	Q9NWS1	579 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	DCAF16	Q9NXF7	216 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	FBXL5	Q9UKA1	691 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	WNT6	Q9Y6F9	365 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	KANSL1L	A0AUZ9	987 aa		3.57	□□□□□ -1.84
SREK1-208	ENST00000520580		B4DGG1	531 aa		3.57	□□□□□ -1.84
SREK1-208	ENST00000520580		J3QR06	171 aa		3.57	□□□□□ -1.84
SREK1-208	ENST00000520580	KIF1C	O43896	1103 aa	Known RBP	3.57	□□□□□ -1.84
SREK1-208	ENST00000520580	PEX11A	O75192	247 aa		3.57	□□□□□ -1.84
SREK1-208	ENST00000520580	TRIM16	O95361	564 aa		3.57	□□□□□ -1.84
SREK1-208	ENST00000520580	NHLRC4	P0CG21	123 aa	Predicted RBP	3.57	□□□□□ -1.84
SREK1-208	ENST00000520580	NR2F2	P24468	414 aa		3.57	□□□□□ -1.84
SREK1-208	ENST00000520580	MPZ	P25189	248 aa		3.57	□□□□□ -1.84
SREK1-208	ENST00000520580	TNFSF8	P32971	234 aa		3.57	□□□□□ -1.84
SREK1-208	ENST00000520580	ADRA1B	P35368	520 aa		3.57	□□□□□ -1.84
SREK1-208	ENST00000520580	PRPH	P41219	470 aa		3.57	□□□□□ -1.84
SREK1-208	ENST00000520580	PPP3CC	P48454	512 aa		3.57	□□□□□ -1.84
SREK1-208	ENST00000520580	COMP	P49747	757 aa	Predicted RBP	3.57	□□□□□ -1.84
SREK1-208	ENST00000520580	ARFIP1	P53367	373 aa		3.57	□□□□□ -1.84
SREK1-208	ENST00000520580	SNRPE	P62304	92 aa	Known RBP	3.57	□□□□□ -1.84
SREK1-208	ENST00000520580	POLR2L	P62875	67 aa	Known RBP	3.57	□□□□□ -1.84
SREK1-208	ENST00000520580	KCNJ10	P78508	379 aa		3.57	□□□□□ -1.84
SREK1-208	ENST00000520580	FAM27E3	Q08E93	113 aa		3.57	□□□□□ -1.84
SREK1-208	ENST00000520580	LAMB3	Q13751	1172 aa		3.57	□□□□□ -1.84
SREK1-208	ENST00000520580	FAM153C	Q494X1	144 aa		3.57	□□□□□ -1.84
SREK1-208	ENST00000520580	USP39	Q53GS9	565 aa	Known RBP	3.57	□□□□□ -1.84
SREK1-208	ENST00000520580	TCTE1	Q5JU00	501 aa		3.57	□□□□□ -1.84
SREK1-208	ENST00000520580	TMEM71	Q6P5X7	295 aa		3.57	□□□□□ -1.84
SREK1-208	ENST00000520580	KDELC1	Q6UW63	502 aa		3.57	□□□□□ -1.84
SREK1-208	ENST00000520580	MIER3	Q7Z3K6	550 aa		3.57	□□□□□ -1.84
SREK1-208	ENST00000520580	LCORL	Q8N3X6	602 aa		3.57	□□□□□ -1.84
SREK1-208	ENST00000520580	CCDC110	Q8TBZ0	833 aa		3.57	□□□□□ -1.84
SREK1-208	ENST00000520580	APBB2	Q92870	758 aa		3.57	□□□□□ -1.84
SREK1-208	ENST00000520580	SLC25A28	Q96A46	364 aa		3.57	□□□□□ -1.84
SREK1-208	ENST00000520580	ORAI1	Q96D31	301 aa		3.57	□□□□□ -1.84
SREK1-208	ENST00000520580	REPS1	Q96D71	796 aa		3.57	□□□□□ -1.84
SREK1-208	ENST00000520580	ERLEC1	Q96DZ1	483 aa		3.57	□□□□□ -1.84
SREK1-208	ENST00000520580	SPATA33	Q96N06	139 aa		3.57	□□□□□ -1.84
SREK1-208	ENST00000520580	SFXN2	Q96NB2	322 aa		3.57	□□□□□ -1.84
SREK1-208	ENST00000520580	PLEKHG4B	Q96PX9	1271 aa		3.57	□□□□□ -1.84
SREK1-208	ENST00000520580	KRTAP9-9	Q9BYP9	154 aa		3.57	□□□□□ -1.84
SREK1-208	ENST00000520580	KRTAP9-4	Q9BYQ2	154 aa		3.57	□□□□□ -1.84
SREK1-208	ENST00000520580	LSG1	Q9H089	658 aa	Known RBP	3.57	□□□□□ -1.84
SREK1-208	ENST00000520580	FAM234A	Q9H0X4	552 aa		3.57	□□□□□ -1.84
SREK1-208	ENST00000520580	SRD5A3	Q9H8P0	318 aa		3.57	□□□□□ -1.84
SREK1-208	ENST00000520580	RNPEPL1	Q9HAU8	725 aa		3.57	□□□□□ -1.84
SREK1-208	ENST00000520580	ANKRD10	Q9NXR5	420 aa		3.57	□□□□□ -1.84
SREK1-208	ENST00000520580	KCNK6	Q9Y257	313 aa		3.57	□□□□□ -1.84
SREK1-208	ENST00000520580	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	3.56	□□□□□ -1.84
SREK1-208	ENST00000520580	FEZF1	A0PJY2	475 aa		3.56	□□□□□ -1.84
SREK1-208	ENST00000520580	SLC9B1P1	A6NJY1	282 aa		3.56	□□□□□ -1.84
SREK1-208	ENST00000520580	BTBD19	C9JJ37	291 aa		3.56	□□□□□ -1.84
SREK1-208	ENST00000520580	PLK4	O00444	970 aa		3.56	□□□□□ -1.84
SREK1-208	ENST00000520580	SLC16A5	O15375	505 aa		3.56	□□□□□ -1.84
SREK1-208	ENST00000520580	PPIP5K2	O43314	1243 aa		3.56	□□□□□ -1.84
SREK1-208	ENST00000520580	SSX4	O60224	188 aa		3.56	□□□□□ -1.84
SREK1-208	ENST00000520580	NOL3	O60936	208 aa	Known RBP	3.56	□□□□□ -1.84
SREK1-208	ENST00000520580	DDHD2	O94830	711 aa		3.56	□□□□□ -1.84
SREK1-208	ENST00000520580	FARP2	O94887	1054 aa	Predicted RBP	3.56	□□□□□ -1.84
SREK1-208	ENST00000520580	AKR7A3	O95154	331 aa		3.56	□□□□□ -1.84
SREK1-208	ENST00000520580	LETM1	O95202	739 aa	Predicted RBP	3.56	□□□□□ -1.84
SREK1-208	ENST00000520580	TGFA	P01135	160 aa		3.56	□□□□□ -1.84
SREK1-208	ENST00000520580	BMP7	P18075	431 aa		3.56	□□□□□ -1.84
SREK1-208	ENST00000520580	VCL	P18206	1134 aa		3.56	□□□□□ -1.84
SREK1-208	ENST00000520580	IFNAR2	P48551	515 aa		3.56	□□□□□ -1.84
SREK1-208	ENST00000520580	SERPINH1	P50454	418 aa	Known RBP	3.56	□□□□□ -1.84
SREK1-208	ENST00000520580	STIM1	Q13586	685 aa		3.56	□□□□□ -1.84
SREK1-208	ENST00000520580	PRKD1	Q15139	912 aa	Predicted RBP	3.56	□□□□□ -1.84
SREK1-208	ENST00000520580	MAPK11	Q15759	364 aa		3.56	□□□□□ -1.84
SREK1-208	ENST00000520580	TAF1B	Q53T94	588 aa	Predicted RBP	3.56	□□□□□ -1.84
SREK1-208	ENST00000520580	GGNBP1	Q5YKI7	109 aa		3.56	□□□□□ -1.84
SREK1-208	ENST00000520580	CHSY1	Q86X52	802 aa		3.56	□□□□□ -1.84
SREK1-208	ENST00000520580	FOXP4	Q8IVH2	680 aa	Predicted RBP	3.56	□□□□□ -1.84
SREK1-208	ENST00000520580	AQP12A	Q8IXF9	295 aa		3.56	□□□□□ -1.84
SREK1-208	ENST00000520580	DDIAS	Q8IXT1	998 aa		3.56	□□□□□ -1.84
SREK1-208	ENST00000520580	PNLDC1	Q8NA58	520 aa	Known RBP	3.56	□□□□□ -1.84
SREK1-208	ENST00000520580	EXD1	Q8NHP7	514 aa		3.56	□□□□□ -1.84
SREK1-208	ENST00000520580	LRRC8C	Q8TDW0	803 aa		3.56	□□□□□ -1.84
SREK1-208	ENST00000520580	RIT1	Q92963	219 aa		3.56	□□□□□ -1.84
SREK1-208	ENST00000520580	CAVIN3	Q969G5	261 aa		3.56	□□□□□ -1.84
SREK1-208	ENST00000520580	RITA1	Q96K30	269 aa		3.56	□□□□□ -1.84
SREK1-208	ENST00000520580	CTAGE1	Q96RT6	745 aa		3.56	□□□□□ -1.84
SREK1-208	ENST00000520580	SLC38A3	Q99624	504 aa		3.56	□□□□□ -1.84
SREK1-208	ENST00000520580	NTPCR	Q9BSD7	190 aa	Known RBP	3.56	□□□□□ -1.84
SREK1-208	ENST00000520580	C16orf70	Q9BSU1	422 aa		3.56	□□□□□ -1.84
SREK1-208	ENST00000520580	POLDIP3	Q9BY77	421 aa	Known RBP	3.56	□□□□□ -1.84
SREK1-208	ENST00000520580	PNRC2	Q9NPJ4	139 aa	Known RBP	3.56	□□□□□ -1.84
SREK1-208	ENST00000520580	TMEM161A	Q9NX61	479 aa		3.56	□□□□□ -1.84
SREK1-208	ENST00000520580	TBC1D7	Q9P0N9	293 aa		3.56	□□□□□ -1.84
SREK1-208	ENST00000520580	DUSP12	Q9UNI6	340 aa		3.56	□□□□□ -1.84
SREK1-208	ENST00000520580	HBS1L	Q9Y450	684 aa	Known RBP	3.56	□□□□□ -1.84
SREK1-208	ENST00000520580	C17orf102	A2RUQ5	167 aa		3.56	□□□□□ -1.84
SREK1-208	ENST00000520580	HEPACAM2	A8MVW5	462 aa		3.56	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms