RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 KCNK4Q9NYG8 393 aa9.17□□□□□ -0.94
CTNNA1-221ENST00000520339 TMEM9Q9P0T7 183 aa9.17□□□□□ -0.94
CTNNA1-221ENST00000520339 TBC1D29Q9UFV1 150 aa9.17□□□□□ -0.94
CTNNA1-221ENST00000520339 ZNHIT2Q9UHR6 403 aa9.17□□□□□ -0.94
CTNNA1-221ENST00000520339 PRKAB1Q9Y478 270 aa9.17□□□□□ -0.94
CTNNA1-221ENST00000520339 BPTFQ12830 3046 aa9.17□□□□□ -0.94
CTNNA1-221ENST00000520339 UNC13CQ8NB66 2214 aa9.16□□□□□ -0.94
CTNNA1-221ENST00000520339 KIF26BQ2KJY2 2108 aa9.16□□□□□ -0.94
CTNNA1-221ENST00000520339 A6NCN8 305 aa9.16□□□□□ -0.94
CTNNA1-221ENST00000520339 B4E171 279 aa9.16□□□□□ -0.94
CTNNA1-221ENST00000520339 MTA2O94776 668 aa9.16□□□□□ -0.94
CTNNA1-221ENST00000520339 ITGB2P05107 769 aa9.16□□□□□ -0.94
CTNNA1-221ENST00000520339 CSTF2P33240 577 aaKnown RBP eCLIP9.16□□□□□ -0.94
CTNNA1-221ENST00000520339 TSPAN7P41732 249 aa9.16□□□□□ -0.94
CTNNA1-221ENST00000520339 LRRC38Q5VT99 294 aa9.16□□□□□ -0.94
CTNNA1-221ENST00000520339 LRFN4Q6PJG9 635 aa9.16□□□□□ -0.94
CTNNA1-221ENST00000520339 HDXQ7Z353 690 aa9.16□□□□□ -0.94
CTNNA1-221ENST00000520339 SLC35G2Q8TBE7 412 aa9.16□□□□□ -0.94
CTNNA1-221ENST00000520339 CCHCR1Q8TD31 782 aa9.16□□□□□ -0.94
CTNNA1-221ENST00000520339 EXTL1Q92935 676 aa9.16□□□□□ -0.94
CTNNA1-221ENST00000520339 TRIM44Q96DX7 344 aaPredicted RBP9.16□□□□□ -0.94
CTNNA1-221ENST00000520339 IMP4Q96G21 291 aaKnown RBP9.16□□□□□ -0.94
CTNNA1-221ENST00000520339 ZNF830Q96NB3 372 aaPredicted RBP9.16□□□□□ -0.94
CTNNA1-221ENST00000520339 SLC38A3Q99624 504 aa9.16□□□□□ -0.94
CTNNA1-221ENST00000520339 CHP1Q99653 195 aa9.16□□□□□ -0.94
CTNNA1-221ENST00000520339 DDA1Q9BW61 102 aa9.16□□□□□ -0.94
CTNNA1-221ENST00000520339 ADGRE3Q9BY15 652 aa9.16□□□□□ -0.94
CTNNA1-221ENST00000520339 CARD9Q9H257 536 aa9.16□□□□□ -0.94
CTNNA1-221ENST00000520339 SARS2Q9NP81 518 aaKnown RBP9.16□□□□□ -0.94
CTNNA1-221ENST00000520339 ENAMQ9NRM1 1142 aa9.16□□□□□ -0.94
CTNNA1-221ENST00000520339 OCIAD1Q9NX40 245 aa9.16□□□□□ -0.94
CTNNA1-221ENST00000520339 PKD2L2Q9NZM6 624 aa9.16□□□□□ -0.94
CTNNA1-221ENST00000520339 KCNK6Q9Y257 313 aa9.16□□□□□ -0.94
CTNNA1-221ENST00000520339 B3GALT1Q9Y5Z6 326 aa9.16□□□□□ -0.94
CTNNA1-221ENST00000520339 CFAP46Q8IYW2 2715 aa9.16□□□□□ -0.94
CTNNA1-221ENST00000520339 LRRD1A4D1F6 860 aa9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 STMND1H3BQB6 276 aa9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 APOL1O14791 398 aa9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 SMAD7O15105 426 aaKnown RBP9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 GRID2O43424 1007 aa9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 AKR1B10O60218 316 aa9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 NUAK1O60285 661 aa9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 DLGAP3O95886 979 aa9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 PTMAP06454 111 aaKnown RBP9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 TPM3P06753 285 aa9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 ACP5P13686 325 aa9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 ZNF8P17098 575 aaPredicted RBP9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 HOXB4P17483 251 aaPredicted RBP9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 ITGB6P18564 788 aa9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 ARHGAP25P42331 645 aa9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 CLCNKAP51800 687 aa9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 HHEXQ03014 270 aa9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 GALNT3Q14435 633 aa9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 PDK1Q15118 436 aa9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 TBR1Q16650 682 aa9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 HP1BP3Q5SSJ5 553 aaPredicted RBP9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 ZFYVE27Q5T4F4 411 aa9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 ZNF648Q5T619 568 aaPredicted RBP9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 WDR74Q6RFH5 385 aaPredicted RBP9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 NPNTQ6UXI9 565 aa9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 CHST15Q7LFX5 561 aaPredicted RBP9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 ARHGAP22Q7Z5H3 698 aa9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 TMC3Q7Z5M5 1100 aa9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 NT5DC3Q86UY8 548 aa9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 SVOPQ8N4V2 548 aa9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 DTWD1Q8N5C7 304 aa9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 BMPERQ8N8U9 685 aa9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 OR10G6Q8NH81 332 aa9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 HTR3CQ8WXA8 447 aa9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 JPH3Q8WXH2 748 aaPredicted RBP9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 ART4Q93070 314 aa9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 OLFM3Q96PB7 478 aa9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 HERPUD2Q9BSE4 406 aa9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 SLC12A9Q9BXP2 914 aa9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 MAK16Q9BXY0 300 aaKnown RBP9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 SPRY4Q9C004 299 aa9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 TRIM5Q9C035 493 aa9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 BRD8Q9H0E9 1235 aa9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 SLC25A51Q9H1U9 297 aa9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 DEF6Q9H4E7 631 aa9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 MAGEE1Q9HCI5 957 aa9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 TRIM39Q9HCM9 518 aa9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 RAD18Q9NS91 495 aa9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 ZNHIT6Q9NWK9 470 aaKnown RBP9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 SLC39A1Q9NY26 324 aa9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 ATXN10Q9UBB4 475 aa9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 NFKBIL1Q9UBC1 381 aaPredicted RBP9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 HEY1Q9Y5J3 304 aa9.15□□□□□ -0.94
CTNNA1-221ENST00000520339 KALRNO60229 2985 aa9.14□□□□□ -0.95
CTNNA1-221ENST00000520339 SHROOM3Q8TF72 1996 aa9.14□□□□□ -0.95
CTNNA1-221ENST00000520339 KIR2DS5A0A0G2JLQ3 304 aa9.14□□□□□ -0.95
CTNNA1-221ENST00000520339 A0A0G2JNG1 304 aa9.14□□□□□ -0.95
CTNNA1-221ENST00000520339 OR5K4A6NMS3 321 aa9.14□□□□□ -0.95
CTNNA1-221ENST00000520339 EFCAB7A8K855 629 aa9.14□□□□□ -0.95
CTNNA1-221ENST00000520339 GOLGA6L6A8MZA4 724 aa9.14□□□□□ -0.95
CTNNA1-221ENST00000520339 KIR2DS3K7RE56 304 aa9.14□□□□□ -0.95
CTNNA1-221ENST00000520339 DUX1O43812 170 aa9.14□□□□□ -0.95
CTNNA1-221ENST00000520339 SNX2O60749 519 aa9.14□□□□□ -0.95
CTNNA1-221ENST00000520339 PIRTP0C851 137 aa9.14□□□□□ -0.95
CTNNA1-221ENST00000520339 IMPDH2P12268 514 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms