RNA–Protein interactions for RNA: ENST00000519632.5

SHPRH-207, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 5,245 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-207ENST00000519632 LINGO1Q96FE5 620 aa12.09□□□□□ -0.47
SHPRH-207ENST00000519632 FNDC11Q9BVV2 318 aa12.09□□□□□ -0.47
SHPRH-207ENST00000519632 C1QTNF1Q9BXJ1 281 aa12.09□□□□□ -0.47
SHPRH-207ENST00000519632 SOX17Q9H6I2 414 aaPredicted RBP12.09□□□□□ -0.47
SHPRH-207ENST00000519632 C14orf119Q9NWQ9 140 aa12.09□□□□□ -0.47
SHPRH-207ENST00000519632 ZNHIT2Q9UHR6 403 aa12.09□□□□□ -0.47
SHPRH-207ENST00000519632 MYPNQ86TC9 1320 aa12.09□□□□□ -0.47
SHPRH-207ENST00000519632 SOCS2O14508 198 aa12.09□□□□□ -0.47
SHPRH-207ENST00000519632 TFAP2AP05549 437 aa12.09□□□□□ -0.47
SHPRH-207ENST00000519632 TYMPP19971 482 aa12.09□□□□□ -0.47
SHPRH-207ENST00000519632 CYP2C18P33260 490 aa12.09□□□□□ -0.47
SHPRH-207ENST00000519632 TTPAP49638 278 aa12.09□□□□□ -0.47
SHPRH-207ENST00000519632 RHOAP61586 193 aa12.09□□□□□ -0.47
SHPRH-207ENST00000519632 EN1Q05925 392 aaPredicted RBP12.09□□□□□ -0.47
SHPRH-207ENST00000519632 NIPA2Q8N8Q9 360 aa12.09□□□□□ -0.47
SHPRH-207ENST00000519632 TMIEQ8NEW7 156 aa12.09□□□□□ -0.47
SHPRH-207ENST00000519632 KCTD15Q96SI1 283 aaPredicted RBP12.09□□□□□ -0.47
SHPRH-207ENST00000519632 NPLQ9BXD5 320 aaPredicted RBP12.09□□□□□ -0.47
SHPRH-207ENST00000519632 LRTM1Q9HBL6 345 aa12.09□□□□□ -0.47
SHPRH-207ENST00000519632 MTRF1O75570 445 aaKnown RBP12.09□□□□□ -0.47
SHPRH-207ENST00000519632 RFPL1O75677 317 aa12.09□□□□□ -0.47
SHPRH-207ENST00000519632 GSTM2P28161 218 aa12.09□□□□□ -0.47
SHPRH-207ENST00000519632 MATKP42679 507 aa12.09□□□□□ -0.47
SHPRH-207ENST00000519632 CAPZA2P47755 286 aa12.09□□□□□ -0.47
SHPRH-207ENST00000519632 SNAPC2Q13487 334 aa12.09□□□□□ -0.47
SHPRH-207ENST00000519632 VEPH1Q14D04 833 aa12.09□□□□□ -0.47
SHPRH-207ENST00000519632 ATP6AP1Q15904 470 aa12.09□□□□□ -0.47
SHPRH-207ENST00000519632 CPSF6Q16630 551 aaKnown RBP eCLIP12.09□□□□□ -0.47
SHPRH-207ENST00000519632 ANXA8L1Q5VT79 327 aa12.09□□□□□ -0.47
SHPRH-207ENST00000519632 CXorf57Q6NSI4 855 aaKnown RBP12.09□□□□□ -0.47
SHPRH-207ENST00000519632 SYVN1Q86TM6 617 aa12.09□□□□□ -0.47
SHPRH-207ENST00000519632 RNASE11Q8TAA1 199 aaKnown RBP12.09□□□□□ -0.47
SHPRH-207ENST00000519632 LGALS12Q96DT0 336 aa12.09□□□□□ -0.47
SHPRH-207ENST00000519632 TIGARQ9NQ88 270 aa12.09□□□□□ -0.47
SHPRH-207ENST00000519632 RPS6KB2Q9UBS0 482 aa12.09□□□□□ -0.47
SHPRH-207ENST00000519632 ST3GAL5Q9UNP4 418 aa12.09□□□□□ -0.47
SHPRH-207ENST00000519632 CMAHPQ9Y471 501 aa12.09□□□□□ -0.47
SHPRH-207ENST00000519632 CPQQ9Y646 472 aa12.09□□□□□ -0.47
SHPRH-207ENST00000519632 MRPL42Q9Y6G3 142 aaKnown RBP12.09□□□□□ -0.47
SHPRH-207ENST00000519632 NPEPPSL1A6NEC2 478 aa12.09□□□□□ -0.47
SHPRH-207ENST00000519632 DDTLA6NHG4 134 aaPredicted RBP12.09□□□□□ -0.47
SHPRH-207ENST00000519632 H3BM21 787 aa12.09□□□□□ -0.47
SHPRH-207ENST00000519632 DLGAP1O14490 977 aa12.09□□□□□ -0.47
SHPRH-207ENST00000519632 KPNA6O60684 536 aa12.09□□□□□ -0.47
SHPRH-207ENST00000519632 XYLBO75191 536 aa12.09□□□□□ -0.47
SHPRH-207ENST00000519632 CHRNB1P11230 501 aa12.09□□□□□ -0.47
SHPRH-207ENST00000519632 PROZP22891 400 aa12.09□□□□□ -0.47
SHPRH-207ENST00000519632 NMBRP28336 390 aa12.09□□□□□ -0.47
SHPRH-207ENST00000519632 OMPP47874 163 aa12.09□□□□□ -0.47
SHPRH-207ENST00000519632 CDH4P55283 916 aa12.09□□□□□ -0.47
SHPRH-207ENST00000519632 CSTF1Q05048 431 aaKnown RBP12.09□□□□□ -0.47
SHPRH-207ENST00000519632 SMCO1Q147U7 214 aa12.09□□□□□ -0.47
SHPRH-207ENST00000519632 TSTQ16762 297 aaKnown RBP12.09□□□□□ -0.47
SHPRH-207ENST00000519632 ZNF567Q8N184 647 aa12.09□□□□□ -0.47
SHPRH-207ENST00000519632 ZNF614Q8N883 585 aa12.09□□□□□ -0.47
SHPRH-207ENST00000519632 KCTD7Q96MP8 289 aa12.09□□□□□ -0.47
SHPRH-207ENST00000519632 TSSK3Q96PN8 268 aa12.09□□□□□ -0.47
SHPRH-207ENST00000519632 NUSAP1Q9BXS6 441 aaKnown RBP12.09□□□□□ -0.47
SHPRH-207ENST00000519632 DSN1Q9H410 356 aa12.09□□□□□ -0.47
SHPRH-207ENST00000519632 MYH8P13535 1937 aa12.08□□□□□ -0.47
SHPRH-207ENST00000519632 VILLO15195 856 aa12.08□□□□□ -0.48
SHPRH-207ENST00000519632 VTNP04004 478 aa12.08□□□□□ -0.48
SHPRH-207ENST00000519632 NFICP08651 508 aa12.08□□□□□ -0.48
SHPRH-207ENST00000519632 PTX3P26022 381 aaPredicted RBP12.08□□□□□ -0.48
SHPRH-207ENST00000519632 ZNF81P51508 661 aa12.08□□□□□ -0.48
SHPRH-207ENST00000519632 SWI5Q1ZZU3 235 aa12.08□□□□□ -0.48
SHPRH-207ENST00000519632 IQCCQ4KMZ1 466 aa12.08□□□□□ -0.48
SHPRH-207ENST00000519632 PABPC1LQ4VXU2 614 aaKnown RBP12.08□□□□□ -0.48
SHPRH-207ENST00000519632 GOLM1Q8NBJ4 401 aa12.08□□□□□ -0.48
SHPRH-207ENST00000519632 SLC13A3Q8WWT9 602 aa12.08□□□□□ -0.48
SHPRH-207ENST00000519632 ZDHHC15Q96MV8 337 aa12.08□□□□□ -0.48
SHPRH-207ENST00000519632 GBA3Q9H227 469 aa12.08□□□□□ -0.48
SHPRH-207ENST00000519632 SAV1Q9H4B6 383 aaPredicted RBP12.08□□□□□ -0.48
SHPRH-207ENST00000519632 EDARQ9UNE0 448 aa12.08□□□□□ -0.48
SHPRH-207ENST00000519632 TESMINQ9Y4I5 508 aa12.08□□□□□ -0.48
SHPRH-207ENST00000519632 M0R233 179 aa12.08□□□□□ -0.48
SHPRH-207ENST00000519632 CBX4O00257 560 aa12.08□□□□□ -0.48
SHPRH-207ENST00000519632 REM1O75628 298 aa12.08□□□□□ -0.48
SHPRH-207ENST00000519632 RHOCP08134 193 aa12.08□□□□□ -0.48
SHPRH-207ENST00000519632 USP17L7P0C7H9 530 aa12.08□□□□□ -0.48
SHPRH-207ENST00000519632 OR1E1P30953 314 aa12.08□□□□□ -0.48
SHPRH-207ENST00000519632 GRIA2P42262 883 aa12.08□□□□□ -0.48
SHPRH-207ENST00000519632 KIR3DL1P43629 444 aa12.08□□□□□ -0.48
SHPRH-207ENST00000519632 PIGFQ07326 219 aa12.08□□□□□ -0.48
SHPRH-207ENST00000519632 ASB18Q6ZVZ8 466 aa12.08□□□□□ -0.48
SHPRH-207ENST00000519632 ADGRD2Q7Z7M1 963 aa12.08□□□□□ -0.48
SHPRH-207ENST00000519632 OR4L1Q8NH43 312 aa12.08□□□□□ -0.48
SHPRH-207ENST00000519632 UFD1Q92890 307 aa12.08□□□□□ -0.48
SHPRH-207ENST00000519632 SMARCD1Q96GM5 515 aa12.08□□□□□ -0.48
SHPRH-207ENST00000519632 TMEM39BQ9GZU3 492 aa12.08□□□□□ -0.48
SHPRH-207ENST00000519632 AKTIPQ9H8T0 292 aa12.08□□□□□ -0.48
SHPRH-207ENST00000519632 MYOZ2Q9NPC6 264 aa12.08□□□□□ -0.48
SHPRH-207ENST00000519632 AQP9O43315 295 aa12.08□□□□□ -0.48
SHPRH-207ENST00000519632 ENDOD1O94919 500 aa12.08□□□□□ -0.48
SHPRH-207ENST00000519632 CHRM5P08912 532 aaPredicted RBP12.08□□□□□ -0.48
SHPRH-207ENST00000519632 DNAJA1P31689 397 aaKnown RBP12.08□□□□□ -0.48
SHPRH-207ENST00000519632 NRLP54845 237 aa12.08□□□□□ -0.48
SHPRH-207ENST00000519632 CDH12P55289 794 aa12.08□□□□□ -0.48
SHPRH-207ENST00000519632 WNT3AP56704 352 aa12.08□□□□□ -0.48
SHPRH-207ENST00000519632 TAS2R39P59534 338 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms