RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 HNRNPKP61978 463 aaKnown RBP eCLIP13.93□□□□□ -0.185e-10■■□□□ 13.3
SDC2-203ENST00000519587 RASA2Q15283 850 aa13.93□□□□□ -0.18
SDC2-203ENST00000519587 INSCQ1MX18 579 aa13.93□□□□□ -0.18
SDC2-203ENST00000519587 SYTL3Q4VX76 610 aa13.93□□□□□ -0.18
SDC2-203ENST00000519587 TRIM61Q5EBN2 209 aa13.93□□□□□ -0.18
SDC2-203ENST00000519587 ZNF789Q5FWF6 425 aa13.93□□□□□ -0.18
SDC2-203ENST00000519587 TPRG1LQ5T0D9 272 aa13.93□□□□□ -0.18
SDC2-203ENST00000519587 UGT3A1Q6NUS8 523 aa13.93□□□□□ -0.18
SDC2-203ENST00000519587 TMEM220Q6QAJ8 160 aa13.93□□□□□ -0.18
SDC2-203ENST00000519587 LRIG3Q6UXM1 1119 aa13.93□□□□□ -0.18
SDC2-203ENST00000519587 HDXQ7Z353 690 aa13.93□□□□□ -0.18
SDC2-203ENST00000519587 KIAA2013Q8IYS2 634 aa13.93□□□□□ -0.18
SDC2-203ENST00000519587 PHACTR4Q8IZ21 702 aa13.93□□□□□ -0.18
SDC2-203ENST00000519587 MTBPQ96DY7 904 aa13.93□□□□□ -0.18
SDC2-203ENST00000519587 SGF29Q96ES7 293 aa13.93□□□□□ -0.18
SDC2-203ENST00000519587 SCARF2Q96GP6 870 aaPredicted RBP13.93□□□□□ -0.18
SDC2-203ENST00000519587 GPR22Q99680 433 aa13.93□□□□□ -0.18
SDC2-203ENST00000519587 AARSD1Q9BTE6 412 aaKnown RBP13.93□□□□□ -0.18
SDC2-203ENST00000519587 ROPN1BQ9BZX4 212 aaPredicted RBP13.93□□□□□ -0.18
SDC2-203ENST00000519587 ROPN1Q9HAT0 212 aaPredicted RBP13.93□□□□□ -0.18
SDC2-203ENST00000519587 TMEM74BQ9NUR3 256 aa13.93□□□□□ -0.18
SDC2-203ENST00000519587 TAS2R13Q9NYV9 303 aa13.93□□□□□ -0.18
SDC2-203ENST00000519587 SLC6A14Q9UN76 642 aa13.93□□□□□ -0.18
SDC2-203ENST00000519587 GOLGA6L10A6NI86 522 aa13.92□□□□□ -0.18
SDC2-203ENST00000519587 SMIM23A6NLE4 172 aa13.92□□□□□ -0.18
SDC2-203ENST00000519587 KHNYNO15037 678 aaKnown RBP13.92□□□□□ -0.18
SDC2-203ENST00000519587 KCNJ13O60928 360 aa13.92□□□□□ -0.18
SDC2-203ENST00000519587 CER1O95813 267 aa13.92□□□□□ -0.18
SDC2-203ENST00000519587 APOA4P06727 396 aa13.92□□□□□ -0.18
SDC2-203ENST00000519587 ITGA2BP08514 1039 aa13.92□□□□□ -0.18
SDC2-203ENST00000519587 CTSEP14091 401 aa13.92□□□□□ -0.18
SDC2-203ENST00000519587 JUNDP17535 347 aa13.92□□□□□ -0.18
SDC2-203ENST00000519587 GABRB3P28472 473 aa13.92□□□□□ -0.18
SDC2-203ENST00000519587 PBLDP30039 288 aaPredicted RBP13.92□□□□□ -0.18
SDC2-203ENST00000519587 CTSKP43235 329 aa13.92□□□□□ -0.18
SDC2-203ENST00000519587 ABCG1P45844 678 aa13.92□□□□□ -0.18
SDC2-203ENST00000519587 HK3P52790 923 aa13.92□□□□□ -0.18
SDC2-203ENST00000519587 POU4F1Q01851 419 aa13.92□□□□□ -0.18
SDC2-203ENST00000519587 PLOD1Q02809 727 aaPredicted RBP13.92□□□□□ -0.18
SDC2-203ENST00000519587 ILF3Q12906 894 aaKnown RBP eCLIP13.92□□□□□ -0.188e-7■■■□□ 15
SDC2-203ENST00000519587 EIF2B5Q13144 721 aaKnown RBP13.92□□□□□ -0.18
SDC2-203ENST00000519587 CASP8Q14790 479 aa13.92□□□□□ -0.18
SDC2-203ENST00000519587 TTLL9Q3SXZ7 439 aa13.92□□□□□ -0.18
SDC2-203ENST00000519587 PYCR3Q53H96 274 aa13.92□□□□□ -0.18
SDC2-203ENST00000519587 CTSL3PQ5NE16 218 aa13.92□□□□□ -0.18
SDC2-203ENST00000519587 SLC23A3Q6PIS1 610 aa13.92□□□□□ -0.18
SDC2-203ENST00000519587 RD3Q7Z3Z2 195 aa13.92□□□□□ -0.18
SDC2-203ENST00000519587 CCDC91Q7Z6B0 441 aa13.92□□□□□ -0.18
SDC2-203ENST00000519587 AMZ2Q86W34 360 aa13.92□□□□□ -0.18
SDC2-203ENST00000519587 SPATS2Q86XZ4 545 aaKnown RBP13.92□□□□□ -0.18
SDC2-203ENST00000519587 TDRPQ86YL5 185 aa13.92□□□□□ -0.18
SDC2-203ENST00000519587 HM13Q8TCT9 377 aa13.92□□□□□ -0.18
SDC2-203ENST00000519587 DCAKDQ8WVC6 231 aa13.92□□□□□ -0.18
SDC2-203ENST00000519587 TSACCQ96A04 125 aaPredicted RBP13.92□□□□□ -0.18
SDC2-203ENST00000519587 PKNOX2Q96KN3 472 aa13.92□□□□□ -0.18
SDC2-203ENST00000519587 LINC00615Q96LM1 132 aaPredicted RBP13.92□□□□□ -0.18
SDC2-203ENST00000519587 BIRC8Q96P09 236 aa13.92□□□□□ -0.18
SDC2-203ENST00000519587 NDNQ99608 321 aa13.92□□□□□ -0.18
SDC2-203ENST00000519587 CCM2Q9BSQ5 444 aa13.92□□□□□ -0.18
SDC2-203ENST00000519587 MCMBPQ9BTE3 642 aa13.92□□□□□ -0.18
SDC2-203ENST00000519587 DHRS4Q9BTZ2 278 aa13.92□□□□□ -0.18
SDC2-203ENST00000519587 TMEM109Q9BVC6 243 aa13.92□□□□□ -0.18
SDC2-203ENST00000519587 ARRDC1-AS1Q9H2J1 176 aa13.92□□□□□ -0.18
SDC2-203ENST00000519587 ACBD3Q9H3P7 528 aa13.92□□□□□ -0.18
SDC2-203ENST00000519587 CAPN10Q9HC96 672 aa13.92□□□□□ -0.18
SDC2-203ENST00000519587 SPATS2LQ9NUQ6 558 aaKnown RBP13.92□□□□□ -0.18
SDC2-203ENST00000519587 TRNAU1APQ9NX07 287 aaKnown RBP13.92□□□□□ -0.18
SDC2-203ENST00000519587 NCDNQ9UBB6 729 aa13.92□□□□□ -0.18
SDC2-203ENST00000519587 APOBEC3BQ9UH17 382 aaKnown RBP13.92□□□□□ -0.18
SDC2-203ENST00000519587 TRMT6Q9UJA5 497 aaKnown RBP13.92□□□□□ -0.18
SDC2-203ENST00000519587 GPSM3Q9Y4H4 160 aa13.92□□□□□ -0.18
SDC2-203ENST00000519587 TMEM131Q92545 1883 aa13.92□□□□□ -0.18
SDC2-203ENST00000519587 EP300Q09472 2414 aaPredicted RBP13.92□□□□□ -0.18
SDC2-203ENST00000519587 KNL1Q8NG31 2342 aa13.91□□□□□ -0.18
SDC2-203ENST00000519587 PCDH15Q96QU1 1955 aa13.91□□□□□ -0.18
SDC2-203ENST00000519587 C17orf113A0A1B0GUU1 675 aa13.91□□□□□ -0.18
SDC2-203ENST00000519587 MGAT4DA6NG13 374 aa13.91□□□□□ -0.18
SDC2-203ENST00000519587 DYNC1I1O14576 645 aa13.91□□□□□ -0.18
SDC2-203ENST00000519587 LIN7AO14910 233 aaPredicted RBP13.91□□□□□ -0.18
SDC2-203ENST00000519587 TRIM16O95361 564 aa13.91□□□□□ -0.18
SDC2-203ENST00000519587 LMNAP02545 664 aaKnown RBP13.91□□□□□ -0.18
SDC2-203ENST00000519587 CSF2P04141 144 aa13.91□□□□□ -0.18
SDC2-203ENST00000519587 SNRPAP09012 282 aaKnown RBP13.91□□□□□ -0.18
SDC2-203ENST00000519587 ACP5P13686 325 aa13.91□□□□□ -0.18
SDC2-203ENST00000519587 CHRM3P20309 590 aa13.91□□□□□ -0.18
SDC2-203ENST00000519587 CD9P21926 228 aa13.91□□□□□ -0.18
SDC2-203ENST00000519587 SKIV2L2P42285 1042 aaKnown RBP13.91□□□□□ -0.18
SDC2-203ENST00000519587 SERPINB8P50452 374 aa13.91□□□□□ -0.18
SDC2-203ENST00000519587 GRIK2Q13002 908 aa13.91□□□□□ -0.18
SDC2-203ENST00000519587 DNAJC3Q13217 504 aa13.91□□□□□ -0.18
SDC2-203ENST00000519587 PDAP1Q13442 181 aaKnown RBP13.91□□□□□ -0.18
SDC2-203ENST00000519587 USP10Q14694 798 aaKnown RBP13.91□□□□□ -0.18
SDC2-203ENST00000519587 KIF19Q2TAC6 998 aa13.91□□□□□ -0.18
SDC2-203ENST00000519587 PLA2G4EQ3MJ16 856 aa13.91□□□□□ -0.18
SDC2-203ENST00000519587 KRT71Q3SY84 523 aa13.91□□□□□ -0.18
SDC2-203ENST00000519587 HECTD2Q5U5R9 776 aa13.91□□□□□ -0.18
SDC2-203ENST00000519587 ADGRD1Q6QNK2 874 aa13.91□□□□□ -0.18
SDC2-203ENST00000519587 OTOAQ7RTW8 1153 aa13.91□□□□□ -0.18
SDC2-203ENST00000519587 FSTL5Q8N475 847 aaPredicted RBP13.91□□□□□ -0.18
SDC2-203ENST00000519587 PNPLA1Q8N8W4 532 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms