RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 AMPHP49418 695 aa3.54□□□□□ -1.84
VPS13B-207ENST00000518569 SIRPAP78324 504 aa3.54□□□□□ -1.84
VPS13B-207ENST00000518569 BAATQ14032 418 aaPredicted RBP3.54□□□□□ -1.84
VPS13B-207ENST00000518569 DLG2Q15700 870 aa3.54□□□□□ -1.84
VPS13B-207ENST00000518569 KLHL22Q53GT1 634 aa3.54□□□□□ -1.84
VPS13B-207ENST00000518569 INTS8Q75QN2 995 aaKnown RBP3.54□□□□□ -1.84
VPS13B-207ENST00000518569 GALNT13Q8IUC8 556 aa3.54□□□□□ -1.84
VPS13B-207ENST00000518569 C1orf52Q8N6N3 182 aaKnown RBP3.54□□□□□ -1.84
VPS13B-207ENST00000518569 MAB21L3Q8N8X9 362 aa3.54□□□□□ -1.84
VPS13B-207ENST00000518569 PRPF31Q8WWY3 499 aaKnown RBP3.54□□□□□ -1.84
VPS13B-207ENST00000518569 CD101Q93033 1021 aa3.54□□□□□ -1.84
VPS13B-207ENST00000518569 ABHD8Q96I13 439 aa3.54□□□□□ -1.84
VPS13B-207ENST00000518569 SMC6Q96SB8 1091 aa3.54□□□□□ -1.84
VPS13B-207ENST00000518569 DDOQ99489 341 aa3.54□□□□□ -1.84
VPS13B-207ENST00000518569 TMX4Q9H1E5 349 aaPredicted RBP3.54□□□□□ -1.84
VPS13B-207ENST00000518569 DENND2DQ9H6A0 471 aaPredicted RBP3.54□□□□□ -1.84
VPS13B-207ENST00000518569 LRRC4Q9HBW1 653 aa3.54□□□□□ -1.84
VPS13B-207ENST00000518569 ABCF3Q9NUQ8 709 aa3.54□□□□□ -1.84
VPS13B-207ENST00000518569 KLHL9Q9P2J3 617 aa3.54□□□□□ -1.84
VPS13B-207ENST00000518569 PCDHGB4Q9UN71 923 aa3.54□□□□□ -1.84
VPS13B-207ENST00000518569 B3GALT5Q9Y2C3 310 aa3.54□□□□□ -1.84
VPS13B-207ENST00000518569 CNTNAP2Q9UHC6 1331 aa3.53□□□□□ -1.84
VPS13B-207ENST00000518569 GLOD5A6NK44 160 aa3.53□□□□□ -1.84
VPS13B-207ENST00000518569 C16orf97H3BN30 126 aa3.53□□□□□ -1.84
VPS13B-207ENST00000518569 TMEM189-UBE2V1I3L0A0 370 aa3.53□□□□□ -1.84
VPS13B-207ENST00000518569 SYNGR3O43761 229 aa3.53□□□□□ -1.84
VPS13B-207ENST00000518569 ENTPD3O75355 529 aa3.53□□□□□ -1.84
VPS13B-207ENST00000518569 BEST1O76090 585 aa3.53□□□□□ -1.84
VPS13B-207ENST00000518569 CSPG5O95196 566 aa3.53□□□□□ -1.84
VPS13B-207ENST00000518569 NR2F1P10589 423 aa3.53□□□□□ -1.84
VPS13B-207ENST00000518569 AMD1P17707 334 aa3.53□□□□□ -1.84
VPS13B-207ENST00000518569 TRIM21P19474 475 aaKnown RBP3.53□□□□□ -1.84
VPS13B-207ENST00000518569 HOXA1P49639 335 aaPredicted RBP3.53□□□□□ -1.84
VPS13B-207ENST00000518569 HSD17B4P51659 736 aa3.53□□□□□ -1.84
VPS13B-207ENST00000518569 STAT2P52630 851 aa3.53□□□□□ -1.84
VPS13B-207ENST00000518569 DLX5P56178 289 aa3.53□□□□□ -1.84
VPS13B-207ENST00000518569 RPL24P83731 157 aaKnown RBP3.53□□□□□ -1.84
VPS13B-207ENST00000518569 UBE2V1Q13404 147 aa3.53□□□□□ -1.84
VPS13B-207ENST00000518569 ZNF718Q3SXZ3 478 aa3.53□□□□□ -1.84
VPS13B-207ENST00000518569 PDSS1Q5T2R2 415 aa3.53□□□□□ -1.84
VPS13B-207ENST00000518569 DHRS7BQ6IAN0 325 aaPredicted RBP3.53□□□□□ -1.84
VPS13B-207ENST00000518569 CASC1Q6TDU7 716 aa3.53□□□□□ -1.84
VPS13B-207ENST00000518569 ZNF771Q7L3S4 317 aaPredicted RBP3.53□□□□□ -1.84
VPS13B-207ENST00000518569 DSG4Q86SJ6 1040 aa3.53□□□□□ -1.84
VPS13B-207ENST00000518569 KBTBD6Q86V97 674 aa3.53□□□□□ -1.84
VPS13B-207ENST00000518569 OR52I2Q8NH67 350 aa3.53□□□□□ -1.84
VPS13B-207ENST00000518569 SPATA20Q8TB22 786 aa3.53□□□□□ -1.84
VPS13B-207ENST00000518569 SMPDL3BQ92485 455 aa3.53□□□□□ -1.84
VPS13B-207ENST00000518569 SLC22A18Q96BI1 424 aa3.53□□□□□ -1.84
VPS13B-207ENST00000518569 HGH1Q9BTY7 390 aa3.53□□□□□ -1.84
VPS13B-207ENST00000518569 SPATC1LQ9H0A9 340 aa3.53□□□□□ -1.84
VPS13B-207ENST00000518569 PPIL3Q9H2H8 161 aaKnown RBP3.53□□□□□ -1.84
VPS13B-207ENST00000518569 MMP27Q9H306 513 aa3.53□□□□□ -1.84
VPS13B-207ENST00000518569 KCNK15Q9H427 330 aa3.53□□□□□ -1.84
VPS13B-207ENST00000518569 PDE7BQ9NP56 450 aa3.53□□□□□ -1.84
VPS13B-207ENST00000518569 PLSCR4Q9NRQ2 329 aa3.53□□□□□ -1.84
VPS13B-207ENST00000518569 MRPL15Q9P015 296 aaKnown RBP3.53□□□□□ -1.84
VPS13B-207ENST00000518569 MARCH4Q9P2E8 410 aaPredicted RBP3.53□□□□□ -1.84
VPS13B-207ENST00000518569 MORF4L1Q9UBU8 362 aa3.53□□□□□ -1.84
VPS13B-207ENST00000518569 PROCRQ9UNN8 238 aa3.53□□□□□ -1.84
VPS13B-207ENST00000518569 ZNF148Q9UQR1 794 aa3.53□□□□□ -1.84
VPS13B-207ENST00000518569 WBP11Q9Y2W2 641 aaKnown RBP3.53□□□□□ -1.84
VPS13B-207ENST00000518569 ZNF711Q9Y462 761 aa3.53□□□□□ -1.84
VPS13B-207ENST00000518569 PCDHGA5Q9Y5G8 931 aa3.53□□□□□ -1.84
VPS13B-207ENST00000518569 A0A0G2JNG1 304 aa3.52□□□□□ -1.85
VPS13B-207ENST00000518569 TMEM178BH3BS89 294 aa3.52□□□□□ -1.85
VPS13B-207ENST00000518569 BMPR1BO00238 502 aa3.52□□□□□ -1.85
VPS13B-207ENST00000518569 ADAMDEC1O15204 470 aa3.52□□□□□ -1.85
VPS13B-207ENST00000518569 WISP2O76076 250 aa3.52□□□□□ -1.85
VPS13B-207ENST00000518569 LDLRP01130 860 aa3.52□□□□□ -1.85
VPS13B-207ENST00000518569 IGHV4-39P01824 125 aa3.52□□□□□ -1.85
VPS13B-207ENST00000518569 TPOP07202 933 aa3.52□□□□□ -1.85
VPS13B-207ENST00000518569 CETPP11597 493 aa3.52□□□□□ -1.85
VPS13B-207ENST00000518569 CSF2RAP15509 400 aa3.52□□□□□ -1.85
VPS13B-207ENST00000518569 NNMTP40261 264 aa3.52□□□□□ -1.85
VPS13B-207ENST00000518569 FMO5P49326 533 aa3.52□□□□□ -1.85
VPS13B-207ENST00000518569 PPP2R2BQ00005 443 aa3.52□□□□□ -1.85
VPS13B-207ENST00000518569 POU5F1Q01860 360 aaKnown RBP3.52□□□□□ -1.85
VPS13B-207ENST00000518569 KIR2DS5Q14953 304 aa3.52□□□□□ -1.85
VPS13B-207ENST00000518569 CCNYL2Q5T2Q4 361 aa3.52□□□□□ -1.85
VPS13B-207ENST00000518569 FAM171BQ6P995 826 aa3.52□□□□□ -1.85
VPS13B-207ENST00000518569 PRPF39Q86UA1 669 aaKnown RBP3.52□□□□□ -1.85
VPS13B-207ENST00000518569 NFE4Q86UQ8 179 aa3.52□□□□□ -1.85
VPS13B-207ENST00000518569 AACSQ86V21 672 aa3.52□□□□□ -1.85
VPS13B-207ENST00000518569 MINDY1Q8N5J2 469 aa3.52□□□□□ -1.85
VPS13B-207ENST00000518569 MCUQ8NE86 351 aa3.52□□□□□ -1.85
VPS13B-207ENST00000518569 TBC1D16Q8TBP0 767 aa3.52□□□□□ -1.85
VPS13B-207ENST00000518569 PTPMT1Q8WUK0 201 aaPredicted RBP3.52□□□□□ -1.85
VPS13B-207ENST00000518569 LINGO1Q96FE5 620 aa3.52□□□□□ -1.85
VPS13B-207ENST00000518569 SCRN2Q96FV2 425 aa3.52□□□□□ -1.85
VPS13B-207ENST00000518569 NEK1Q96PY6 1258 aa3.52□□□□□ -1.85
VPS13B-207ENST00000518569 PAFAH2Q99487 392 aa3.52□□□□□ -1.85
VPS13B-207ENST00000518569 MXD3Q9BW11 206 aa3.52□□□□□ -1.85
VPS13B-207ENST00000518569 CHMP1AQ9HD42 196 aaPredicted RBP3.52□□□□□ -1.85
VPS13B-207ENST00000518569 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.52□□□□□ -1.85
VPS13B-207ENST00000518569 DONSONQ9NYP3 566 aa3.52□□□□□ -1.85
VPS13B-207ENST00000518569 LARSQ9P2J5 1176 aaKnown RBP3.52□□□□□ -1.85
VPS13B-207ENST00000518569 HACL1Q9UJ83 578 aa3.52□□□□□ -1.85
VPS13B-207ENST00000518569 RPS6KA6Q9UK32 745 aa3.52□□□□□ -1.85
VPS13B-207ENST00000518569 PTRH2Q9Y3E5 179 aaKnown RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms