RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 SLC2A13Q96QE2 648 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 SLC2A11Q9BYW1 496 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 NANOGQ9H9S0 305 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 ZFP14Q9HCL3 533 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 RPRD1BQ9NQG5 326 aaKnown RBP6.59□□□□□ -1.35
CPNE3-203ENST00000517490 PDP1Q9P0J1 537 aaPredicted RBP6.59□□□□□ -1.35
CPNE3-203ENST00000517490 SLC13A4Q9UKG4 626 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 TMCC3Q9ULS5 477 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 COL4A1P02462 1669 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 ILVBLA1L0T0 632 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 E9PAM4 449 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 CHRNA1P02708 482 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 PCSK2P16519 638 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 SCAPQ12770 1279 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 NCF4Q15080 339 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 NFE2Q16621 373 aaPredicted RBP6.59□□□□□ -1.35
CPNE3-203ENST00000517490 SULT1C3Q6IMI6 304 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 ERICH5Q6P6B1 374 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 ZNF621Q6ZSS3 439 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 SPRED1Q7Z699 444 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 CILP2Q8IUL8 1156 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 UBASH3BQ8TF42 649 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 NELL1Q92832 810 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 TMCO6Q96DC7 493 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 MTERF3Q96E29 417 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 KLRG1Q96E93 195 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 GPR21Q99679 349 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 DCSTAMPQ9H295 470 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 GOLGA2P5Q9HBQ8 144 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 POPDC3Q9HBV1 291 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 CMTM6Q9NX76 183 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 FAM155AB1AL88 458 aaPredicted RBP6.59□□□□□ -1.36
CPNE3-203ENST00000517490 RPLP0P05388 317 aaKnown RBP6.59□□□□□ -1.36
CPNE3-203ENST00000517490 DARSP14868 501 aaKnown RBP6.59□□□□□ -1.36
CPNE3-203ENST00000517490 EPB42P16452 691 aa6.59□□□□□ -1.36
CPNE3-203ENST00000517490 RHOQP17081 205 aa6.59□□□□□ -1.36
CPNE3-203ENST00000517490 MAGP20916 626 aa6.59□□□□□ -1.36
CPNE3-203ENST00000517490 SLC6A2P23975 617 aa6.59□□□□□ -1.36
CPNE3-203ENST00000517490 FMO3P31513 532 aa6.59□□□□□ -1.36
CPNE3-203ENST00000517490 OPRL1P41146 370 aa6.59□□□□□ -1.36
CPNE3-203ENST00000517490 CXCR3P49682 368 aa6.59□□□□□ -1.36
CPNE3-203ENST00000517490 CPT1AP50416 773 aa6.59□□□□□ -1.36
CPNE3-203ENST00000517490 DSC2Q02487 901 aa6.59□□□□□ -1.36
CPNE3-203ENST00000517490 TRIQKQ629K1 86 aa6.59□□□□□ -1.36
CPNE3-203ENST00000517490 LUZP2Q86TE4 346 aa6.59□□□□□ -1.36
CPNE3-203ENST00000517490 ZDHHC21Q8IVQ6 265 aa6.59□□□□□ -1.36
CPNE3-203ENST00000517490 LSMEM2Q8N112 164 aa6.59□□□□□ -1.36
CPNE3-203ENST00000517490 MAELQ96JY0 434 aaKnown RBP6.59□□□□□ -1.36
CPNE3-203ENST00000517490 PGLYRP2Q96PD5 576 aa6.59□□□□□ -1.36
CPNE3-203ENST00000517490 MMP27Q9H306 513 aa6.59□□□□□ -1.36
CPNE3-203ENST00000517490 RASSF1Q9NS23 344 aa6.59□□□□□ -1.36
CPNE3-203ENST00000517490 IGSF5Q9NSI5 407 aa6.59□□□□□ -1.36
CPNE3-203ENST00000517490 FNIP2Q9P278 1114 aa6.59□□□□□ -1.36
CPNE3-203ENST00000517490 UBA2Q9UBT2 640 aaPredicted RBP6.59□□□□□ -1.36
CPNE3-203ENST00000517490 FZD1Q9UP38 647 aa6.59□□□□□ -1.36
CPNE3-203ENST00000517490 SNTNA6NMZ2 147 aa6.58□□□□□ -1.36
CPNE3-203ENST00000517490 PLOD2O00469 737 aa6.58□□□□□ -1.36
CPNE3-203ENST00000517490 CCL22O00626 93 aa6.58□□□□□ -1.36
CPNE3-203ENST00000517490 RFXANKO14593 260 aa6.58□□□□□ -1.36
CPNE3-203ENST00000517490 FFAR3O14843 346 aa6.58□□□□□ -1.36
CPNE3-203ENST00000517490 AURKAO14965 403 aa6.58□□□□□ -1.36
CPNE3-203ENST00000517490 SPTLC1O15269 473 aa6.58□□□□□ -1.36
CPNE3-203ENST00000517490 GPR42O15529 346 aa6.58□□□□□ -1.36
CPNE3-203ENST00000517490 LZTS3O60299 673 aaPredicted RBP6.58□□□□□ -1.36
CPNE3-203ENST00000517490 BCAS1O75363 584 aaPredicted RBP6.58□□□□□ -1.36
CPNE3-203ENST00000517490 SERPINI2O75830 405 aa6.58□□□□□ -1.36
CPNE3-203ENST00000517490 CDK14O94921 469 aa6.58□□□□□ -1.36
CPNE3-203ENST00000517490 FABP3P05413 133 aa6.58□□□□□ -1.36
CPNE3-203ENST00000517490 LPOP22079 712 aaPredicted RBP6.58□□□□□ -1.36
CPNE3-203ENST00000517490 GPX3P22352 226 aa6.58□□□□□ -1.36
CPNE3-203ENST00000517490 POU1F1P28069 291 aa6.58□□□□□ -1.36
CPNE3-203ENST00000517490 ADCYAP1R1P41586 468 aa6.58□□□□□ -1.36
CPNE3-203ENST00000517490 PLA2G16P53816 162 aa6.58□□□□□ -1.36
CPNE3-203ENST00000517490 GRSF1Q12849 480 aaKnown RBP eCLIP6.58□□□□□ -1.36
CPNE3-203ENST00000517490 CBLBQ13191 982 aa6.58□□□□□ -1.36
CPNE3-203ENST00000517490 GALNT3Q14435 633 aa6.58□□□□□ -1.36
CPNE3-203ENST00000517490 GRB7Q14451 532 aa6.58□□□□□ -1.36
CPNE3-203ENST00000517490 TAB1Q15750 504 aa6.58□□□□□ -1.36
CPNE3-203ENST00000517490 ZNF181Q2M3W8 571 aa6.58□□□□□ -1.36
CPNE3-203ENST00000517490 ZNF404Q494X3 552 aa6.58□□□□□ -1.36
CPNE3-203ENST00000517490 ANKDD1AQ495B1 522 aa6.58□□□□□ -1.36
CPNE3-203ENST00000517490 COLEC12Q5KU26 742 aa6.58□□□□□ -1.36
CPNE3-203ENST00000517490 ZCCHC8Q6NZY4 707 aaKnown RBP6.58□□□□□ -1.36
CPNE3-203ENST00000517490 SLC2A7Q6PXP3 512 aa6.58□□□□□ -1.36
CPNE3-203ENST00000517490 CYP20A1Q6UW02 462 aa6.58□□□□□ -1.36
CPNE3-203ENST00000517490 HFE2Q6ZVN8 426 aa6.58□□□□□ -1.36
CPNE3-203ENST00000517490 TICAM1Q8IUC6 712 aa6.58□□□□□ -1.36
CPNE3-203ENST00000517490 SH3YL1Q96HL8 342 aaPredicted RBP6.58□□□□□ -1.36
CPNE3-203ENST00000517490 UHRF1Q96T88 793 aaPredicted RBP6.58□□□□□ -1.36
CPNE3-203ENST00000517490 GMLQ99445 158 aa6.58□□□□□ -1.36
CPNE3-203ENST00000517490 HERC2P3Q9BVR0 1158 aa6.58□□□□□ -1.36
CPNE3-203ENST00000517490 MARCH7Q9H992 704 aa6.58□□□□□ -1.36
CPNE3-203ENST00000517490 CPNE5Q9HCH3 593 aa6.58□□□□□ -1.36
CPNE3-203ENST00000517490 FAM118AQ9NWS6 357 aa6.58□□□□□ -1.36
CPNE3-203ENST00000517490 GIMAP2Q9UG22 337 aa6.58□□□□□ -1.36
CPNE3-203ENST00000517490 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.58□□□□□ -1.36
CPNE3-203ENST00000517490 SNX8Q9Y5X2 465 aa6.58□□□□□ -1.36
CPNE3-203ENST00000517490 CPQQ9Y646 472 aa6.58□□□□□ -1.36
CPNE3-203ENST00000517490 FAM72CH0Y354 149 aa6.58□□□□□ -1.36
CPNE3-203ENST00000517490 SERPINA1P01009 418 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms