RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 CTRCQ99895 268 aa13.42□□□□□ -0.26
TCOF1-215ENST00000515516 FAM118BQ9BPY3 351 aa13.42□□□□□ -0.26
TCOF1-215ENST00000515516 APOL2Q9BQE5 337 aa13.42□□□□□ -0.26
TCOF1-215ENST00000515516 EFHD1Q9BUP0 239 aa13.42□□□□□ -0.26
TCOF1-215ENST00000515516 TRIT1Q9H3H1 467 aaKnown RBP13.42□□□□□ -0.26
TCOF1-215ENST00000515516 ASB8Q9H765 288 aa13.42□□□□□ -0.26
TCOF1-215ENST00000515516 SLC40A1Q9NP59 571 aa13.42□□□□□ -0.26
TCOF1-215ENST00000515516 SMOXQ9NWM0 555 aa13.42□□□□□ -0.26
TCOF1-215ENST00000515516 IMPACTQ9P2X3 320 aa13.42□□□□□ -0.26
TCOF1-215ENST00000515516 FEZ2Q9UHY8 353 aaPredicted RBP13.42□□□□□ -0.26
TCOF1-215ENST00000515516 MN1Q10571 1320 aaPredicted RBP13.41□□□□□ -0.26
TCOF1-215ENST00000515516 KLHL33A6NCF5 533 aa13.41□□□□□ -0.26
TCOF1-215ENST00000515516 TOX3O15405 576 aaPredicted RBP13.41□□□□□ -0.26
TCOF1-215ENST00000515516 SRP72O76094 671 aaKnown RBP13.41□□□□□ -0.26
TCOF1-215ENST00000515516 ANKRD34CP0C6C1 535 aa13.41□□□□□ -0.26
TCOF1-215ENST00000515516 SFTPCP11686 197 aa13.41□□□□□ -0.26
TCOF1-215ENST00000515516 BRAFP15056 766 aa13.41□□□□□ -0.26
TCOF1-215ENST00000515516 ADRA1AP35348 466 aa13.41□□□□□ -0.26
TCOF1-215ENST00000515516 HADHAP40939 763 aa13.41□□□□□ -0.26
TCOF1-215ENST00000515516 FOXM1Q08050 763 aa13.41□□□□□ -0.26
TCOF1-215ENST00000515516 DMPKQ09013 629 aa13.41□□□□□ -0.26
TCOF1-215ENST00000515516 GPR18Q14330 331 aa13.41□□□□□ -0.26
TCOF1-215ENST00000515516 PTPRCAPQ14761 206 aa13.41□□□□□ -0.26
TCOF1-215ENST00000515516 CLCA4Q14CN2 919 aa13.41□□□□□ -0.26
TCOF1-215ENST00000515516 DET1Q7L5Y6 550 aa13.41□□□□□ -0.26
TCOF1-215ENST00000515516 C11orf96Q7Z7L8 435 aa13.41□□□□□ -0.26
TCOF1-215ENST00000515516 BEND7Q8N7W2 519 aaPredicted RBP13.41□□□□□ -0.26
TCOF1-215ENST00000515516 LRRC57Q8N9N7 239 aa13.41□□□□□ -0.26
TCOF1-215ENST00000515516 ALG3Q92685 438 aa13.41□□□□□ -0.26
TCOF1-215ENST00000515516 EXTL1Q92935 676 aa13.41□□□□□ -0.26
TCOF1-215ENST00000515516 ULK4Q96C45 1275 aa13.41□□□□□ -0.26
TCOF1-215ENST00000515516 TBL1YQ9BQ87 522 aa13.41□□□□□ -0.26
TCOF1-215ENST00000515516 CRLS1Q9UJA2 301 aa13.41□□□□□ -0.26
TCOF1-215ENST00000515516 SLC30A1Q9Y6M5 507 aa13.41□□□□□ -0.26
TCOF1-215ENST00000515516 UNC13CQ8NB66 2214 aa13.4□□□□□ -0.26
TCOF1-215ENST00000515516 PRR19A6NJB7 356 aa13.4□□□□□ -0.26
TCOF1-215ENST00000515516 CFAP99D6REC4 459 aa13.4□□□□□ -0.26
TCOF1-215ENST00000515516 GPR39O43194 453 aa13.4□□□□□ -0.26
TCOF1-215ENST00000515516 STK17BO94768 372 aa13.4□□□□□ -0.26
TCOF1-215ENST00000515516 C9P02748 559 aa13.4□□□□□ -0.26
TCOF1-215ENST00000515516 LIFP15018 202 aa13.4□□□□□ -0.26
TCOF1-215ENST00000515516 CAPZBP47756 277 aa13.4□□□□□ -0.26
TCOF1-215ENST00000515516 SEPHS1P49903 392 aa13.4□□□□□ -0.26
TCOF1-215ENST00000515516 ARSDP51689 593 aa13.4□□□□□ -0.26
TCOF1-215ENST00000515516 CTSCP53634 463 aa13.4□□□□□ -0.26
TCOF1-215ENST00000515516 GFERP55789 205 aa13.4□□□□□ -0.26
TCOF1-215ENST00000515516 KRT33BQ14525 404 aa13.4□□□□□ -0.26
TCOF1-215ENST00000515516 PLCL1Q15111 1095 aa13.4□□□□□ -0.26
TCOF1-215ENST00000515516 RPE65Q16518 533 aa13.4□□□□□ -0.26
TCOF1-215ENST00000515516 PARP6Q2NL67 630 aa13.4□□□□□ -0.26
TCOF1-215ENST00000515516 CACHD1Q5VU97 1274 aa13.4□□□□□ -0.26
TCOF1-215ENST00000515516 IRGCQ6NXR0 463 aa13.4□□□□□ -0.26
TCOF1-215ENST00000515516 AADACL2Q6P093 401 aa13.4□□□□□ -0.26
TCOF1-215ENST00000515516 CYB5D1Q6P9G0 228 aa13.4□□□□□ -0.26
TCOF1-215ENST00000515516 HEXDCQ8WVB3 486 aa13.4□□□□□ -0.26
TCOF1-215ENST00000515516 ALS2CR12Q96Q35 445 aa13.4□□□□□ -0.26
TCOF1-215ENST00000515516 GORASP1Q9BQQ3 440 aa13.4□□□□□ -0.26
TCOF1-215ENST00000515516 SEMA4CQ9C0C4 833 aa13.4□□□□□ -0.26
TCOF1-215ENST00000515516 GPN2Q9H9Y4 310 aaPredicted RBP13.4□□□□□ -0.26
TCOF1-215ENST00000515516 OGFRQ9NZT2 677 aa13.4□□□□□ -0.26
TCOF1-215ENST00000515516 FKBPLQ9UIM3 349 aa13.4□□□□□ -0.26
TCOF1-215ENST00000515516 PILRAQ9UKJ1 303 aa13.4□□□□□ -0.26
TCOF1-215ENST00000515516 ACSL5Q9ULC5 683 aa13.4□□□□□ -0.26
TCOF1-215ENST00000515516 PSMD13Q9UNM6 376 aa13.4□□□□□ -0.26
TCOF1-215ENST00000515516 WDR37Q9Y2I8 494 aa13.4□□□□□ -0.26
TCOF1-215ENST00000515516 KIF26BQ2KJY2 2108 aa13.39□□□□□ -0.27
TCOF1-215ENST00000515516 SMG1Q96Q15 3661 aaKnown RBP13.39□□□□□ -0.27
TCOF1-215ENST00000515516 MGAT4DA6NG13 374 aa13.39□□□□□ -0.27
TCOF1-215ENST00000515516 ZNF891A8MT65 544 aaPredicted RBP13.39□□□□□ -0.27
TCOF1-215ENST00000515516 B8ZZF3 427 aa13.39□□□□□ -0.27
TCOF1-215ENST00000515516 GAPDHSO14556 408 aaPredicted RBP13.39□□□□□ -0.27
TCOF1-215ENST00000515516 PSMD3O43242 534 aa13.39□□□□□ -0.27
TCOF1-215ENST00000515516 FTCDO95954 541 aa13.39□□□□□ -0.27
TCOF1-215ENST00000515516 ITGALP20701 1170 aa13.39□□□□□ -0.27
TCOF1-215ENST00000515516 LEPRP48357 1165 aaKnown RBP13.39□□□□□ -0.27
TCOF1-215ENST00000515516 CYP4F2P78329 520 aa13.39□□□□□ -0.27
TCOF1-215ENST00000515516 TMPRSS15P98073 1019 aa13.39□□□□□ -0.27
TCOF1-215ENST00000515516 OLIG2Q13516 323 aa13.39□□□□□ -0.27
TCOF1-215ENST00000515516 NFE2L1Q14494 772 aa13.39□□□□□ -0.27
TCOF1-215ENST00000515516 SPARCL1Q14515 664 aa13.39□□□□□ -0.27
TCOF1-215ENST00000515516 TBR1Q16650 682 aa13.39□□□□□ -0.27
TCOF1-215ENST00000515516 METRNLQ641Q3 311 aa13.39□□□□□ -0.27
TCOF1-215ENST00000515516 ARMC6Q6NXE6 501 aa13.39□□□□□ -0.27
TCOF1-215ENST00000515516 FAM92BQ6ZTR7 304 aa13.39□□□□□ -0.27
TCOF1-215ENST00000515516 RASGRP3Q8IV61 690 aa13.39□□□□□ -0.27
TCOF1-215ENST00000515516 ESX1Q8N693 406 aa13.39□□□□□ -0.27
TCOF1-215ENST00000515516 FAM71DQ8N9W8 422 aa13.39□□□□□ -0.27
TCOF1-215ENST00000515516 SPC24Q8NBT2 197 aa13.39□□□□□ -0.27
TCOF1-215ENST00000515516 OR2L2Q8NH16 312 aa13.39□□□□□ -0.27
TCOF1-215ENST00000515516 FAM117AQ9C073 453 aa13.39□□□□□ -0.27
TCOF1-215ENST00000515516 ZNF768Q9H5H4 540 aaKnown RBP13.39□□□□□ -0.27
TCOF1-215ENST00000515516 APMAPQ9HDC9 416 aa13.39□□□□□ -0.27
TCOF1-215ENST00000515516 IMP3Q9NV31 184 aaKnown RBP13.39□□□□□ -0.27
TCOF1-215ENST00000515516 EPHA6Q9UF33 1036 aa13.39□□□□□ -0.27
TCOF1-215ENST00000515516 KCTD3Q9Y597 815 aa13.39□□□□□ -0.27
TCOF1-215ENST00000515516 HEMK1Q9Y5R4 338 aaPredicted RBP13.39□□□□□ -0.27
TCOF1-215ENST00000515516 ARHGEF17Q96PE2 2063 aaPredicted RBP13.38□□□□□ -0.27
TCOF1-215ENST00000515516 BPTFQ12830 3046 aa13.38□□□□□ -0.27
TCOF1-215ENST00000515516 SLC35G4P0C7Q5 338 aa13.38□□□□□ -0.27
TCOF1-215ENST00000515516 PLA2G2AP14555 144 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms