RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 FAM155BO75949 473 aa20.65■□□□□ 0.9
LSM6-207ENST00000515311 JUNDP17535 347 aa20.65■□□□□ 0.9
LSM6-207ENST00000515311 CD9P21926 228 aa20.65■□□□□ 0.9
LSM6-207ENST00000515311 GCAP28676 217 aa20.65■□□□□ 0.9
LSM6-207ENST00000515311 ABCG1P45844 678 aa20.65■□□□□ 0.9
LSM6-207ENST00000515311 RXRGP48443 463 aa20.65■□□□□ 0.9
LSM6-207ENST00000515311 FAM45BPQ6NSW5 357 aa20.65■□□□□ 0.9
LSM6-207ENST00000515311 RD3Q7Z3Z2 195 aa20.65■□□□□ 0.9
LSM6-207ENST00000515311 TDRPQ86YL5 185 aa20.65■□□□□ 0.9
LSM6-207ENST00000515311 IQCKQ8N0W5 287 aa20.65■□□□□ 0.9
LSM6-207ENST00000515311 BEND7Q8N7W2 519 aaPredicted RBP20.65■□□□□ 0.9
LSM6-207ENST00000515311 FAM45AQ8TCE6 357 aa20.65■□□□□ 0.9
LSM6-207ENST00000515311 NAT14Q8WUY8 206 aa20.65■□□□□ 0.9
LSM6-207ENST00000515311 MRRFQ96E11 262 aaKnown RBP20.65■□□□□ 0.9
LSM6-207ENST00000515311 ELF4Q99607 663 aaPredicted RBP20.65■□□□□ 0.9
LSM6-207ENST00000515311 GPR22Q99680 433 aa20.65■□□□□ 0.9
LSM6-207ENST00000515311 APOBEC3BQ9UH17 382 aaKnown RBP20.65■□□□□ 0.9
LSM6-207ENST00000515311 PLAAQ9Y263 795 aa20.65■□□□□ 0.9
LSM6-207ENST00000515311 PRKAB1Q9Y478 270 aa20.65■□□□□ 0.9
LSM6-207ENST00000515311 FRYLO94915 3013 aa20.65■□□□□ 0.9
LSM6-207ENST00000515311 MYO15AQ9UKN7 3530 aa20.64■□□□□ 0.9
LSM6-207ENST00000515311 C17orf113A0A1B0GUU1 675 aa20.64■□□□□ 0.89
LSM6-207ENST00000515311 FAM95CA0A1B0GW59 222 aa20.64■□□□□ 0.89
LSM6-207ENST00000515311 NIPSNAP2O75323 286 aa20.64■□□□□ 0.89
LSM6-207ENST00000515311 POP7O75817 140 aaKnown RBP20.64■□□□□ 0.89
LSM6-207ENST00000515311 ITGA2BP08514 1039 aa20.64■□□□□ 0.89
LSM6-207ENST00000515311 VCLP18206 1134 aa20.64■□□□□ 0.89
LSM6-207ENST00000515311 ARRB1P49407 418 aaPredicted RBP20.64■□□□□ 0.89
LSM6-207ENST00000515311 HNRNPKP61978 463 aaKnown RBP eCLIP20.64■□□□□ 0.89
LSM6-207ENST00000515311 DMPKQ09013 629 aa20.64■□□□□ 0.89
LSM6-207ENST00000515311 IFFO1Q0D2I5 559 aa20.64■□□□□ 0.89
LSM6-207ENST00000515311 ZNF542PQ5EBM4 170 aa20.64■□□□□ 0.89
LSM6-207ENST00000515311 RBM20Q5T481 1227 aaKnown RBP20.64■□□□□ 0.89
LSM6-207ENST00000515311 ADGRD1Q6QNK2 874 aa20.64■□□□□ 0.89
LSM6-207ENST00000515311 AMZ2Q86W34 360 aa20.64■□□□□ 0.89
LSM6-207ENST00000515311 GPATCH11Q8N954 259 aa20.64■□□□□ 0.89
LSM6-207ENST00000515311 OR2L2Q8NH16 312 aa20.64■□□□□ 0.89
LSM6-207ENST00000515311 ATXN7L3BQ96GX2 97 aa20.64■□□□□ 0.89
LSM6-207ENST00000515311 NDNQ99608 321 aa20.64■□□□□ 0.89
LSM6-207ENST00000515311 TMEM109Q9BVC6 243 aa20.64■□□□□ 0.89
LSM6-207ENST00000515311 ROPN1BQ9BZX4 212 aaPredicted RBP20.64■□□□□ 0.89
LSM6-207ENST00000515311 ROPN1Q9HAT0 212 aaPredicted RBP20.64■□□□□ 0.89
LSM6-207ENST00000515311 KLHL42Q9P2K6 505 aa20.64■□□□□ 0.89
LSM6-207ENST00000515311 PSMC3IPQ9P2W1 217 aaPredicted RBP20.64■□□□□ 0.89
LSM6-207ENST00000515311 MED16Q9Y2X0 877 aa20.64■□□□□ 0.89
LSM6-207ENST00000515311 GPSM3Q9Y4H4 160 aa20.64■□□□□ 0.89
LSM6-207ENST00000515311 NFS1Q9Y697 457 aa20.64■□□□□ 0.89
LSM6-207ENST00000515311 OTOGLQ3ZCN5 2332 aa20.63■□□□□ 0.89
LSM6-207ENST00000515311 MGAT4DA6NG13 374 aa20.63■□□□□ 0.89
LSM6-207ENST00000515311 E5RI56 91 aa20.63■□□□□ 0.89
LSM6-207ENST00000515311 KPNA5O15131 536 aa20.63■□□□□ 0.89
LSM6-207ENST00000515311 YKT6O15498 198 aa20.63■□□□□ 0.89
LSM6-207ENST00000515311 VPS26AO75436 327 aa20.63■□□□□ 0.89
LSM6-207ENST00000515311 KRT38O76015 456 aa20.63■□□□□ 0.89
LSM6-207ENST00000515311 CER1O95813 267 aa20.63■□□□□ 0.89
LSM6-207ENST00000515311 ZNF806P0C7X5 589 aa20.63■□□□□ 0.89
LSM6-207ENST00000515311 CLCNKAP51800 687 aa20.63■□□□□ 0.89
LSM6-207ENST00000515311 IRX4P78413 519 aa20.63■□□□□ 0.89
LSM6-207ENST00000515311 ARHGAP8P85298 464 aa20.63■□□□□ 0.89
LSM6-207ENST00000515311 POU4F1Q01851 419 aa20.63■□□□□ 0.89
LSM6-207ENST00000515311 CCDC6Q16204 474 aa20.63■□□□□ 0.89
LSM6-207ENST00000515311 INSCQ1MX18 579 aa20.63■□□□□ 0.89
LSM6-207ENST00000515311 HLA-BQ31612 363 aa20.63■□□□□ 0.89
LSM6-207ENST00000515311 ZNF658BQ4V348 819 aaPredicted RBP20.63■□□□□ 0.89
LSM6-207ENST00000515311 HECTD2Q5U5R9 776 aa20.63■□□□□ 0.89
LSM6-207ENST00000515311 CHST15Q7LFX5 561 aaPredicted RBP20.63■□□□□ 0.89
LSM6-207ENST00000515311 OR2W6PQ8NHA6 318 aa20.63■□□□□ 0.89
LSM6-207ENST00000515311 HM13Q8TCT9 377 aa20.63■□□□□ 0.89
LSM6-207ENST00000515311 GPBAR1Q8TDU6 330 aa20.63■□□□□ 0.89
LSM6-207ENST00000515311 LRRC61Q9BV99 259 aa20.63■□□□□ 0.89
LSM6-207ENST00000515311 TMEM168Q9H0V1 697 aa20.63■□□□□ 0.89
LSM6-207ENST00000515311 TCEAL2Q9H3H9 227 aaPredicted RBP20.63■□□□□ 0.89
LSM6-207ENST00000515311 LATS2Q9NRM7 1088 aa20.63■□□□□ 0.89
LSM6-207ENST00000515311 TM7SF3Q9NS93 570 aa20.63■□□□□ 0.89
LSM6-207ENST00000515311 SPATS2LQ9NUQ6 558 aaKnown RBP20.63■□□□□ 0.89
LSM6-207ENST00000515311 TAS2R13Q9NYV9 303 aa20.63■□□□□ 0.89
LSM6-207ENST00000515311 NCDNQ9UBB6 729 aa20.63■□□□□ 0.89
LSM6-207ENST00000515311 GULP1Q9UBP9 304 aa20.63■□□□□ 0.89
LSM6-207ENST00000515311 MTO1Q9Y2Z2 717 aaKnown RBP20.63■□□□□ 0.89
LSM6-207ENST00000515311 VWA7Q9Y334 891 aa20.63■□□□□ 0.89
LSM6-207ENST00000515311 LAMA1P25391 3075 aa20.63■□□□□ 0.89
LSM6-207ENST00000515311 TDRD6O60522 2096 aaKnown RBP20.62■□□□□ 0.89
LSM6-207ENST00000515311 PRR19A6NJB7 356 aa20.62■□□□□ 0.89
LSM6-207ENST00000515311 IQCF5A8MTL0 148 aa20.62■□□□□ 0.89
LSM6-207ENST00000515311 CDH16O75309 829 aa20.62■□□□□ 0.89
LSM6-207ENST00000515311 TRIM16O95361 564 aa20.62■□□□□ 0.89
LSM6-207ENST00000515311 ACP5P13686 325 aa20.62■□□□□ 0.89
LSM6-207ENST00000515311 CTSEP14091 401 aa20.62■□□□□ 0.89
LSM6-207ENST00000515311 CHRM3P20309 590 aa20.62■□□□□ 0.89
LSM6-207ENST00000515311 FDXRP22570 491 aa20.62■□□□□ 0.89
LSM6-207ENST00000515311 AOAHP28039 575 aa20.62■□□□□ 0.89
LSM6-207ENST00000515311 SKIV2L2P42285 1042 aaKnown RBP20.62■□□□□ 0.89
LSM6-207ENST00000515311 CLCN7P51798 805 aa20.62■□□□□ 0.89
LSM6-207ENST00000515311 CDKN2DP55273 166 aa20.62■□□□□ 0.89
LSM6-207ENST00000515311 ILF3Q12906 894 aaKnown RBP eCLIP20.62■□□□□ 0.89
LSM6-207ENST00000515311 CASP8Q14790 479 aa20.62■□□□□ 0.89
LSM6-207ENST00000515311 PLA2G4EQ3MJ16 856 aa20.62■□□□□ 0.89
LSM6-207ENST00000515311 LGSNQ5TDP6 509 aa20.62■□□□□ 0.89
LSM6-207ENST00000515311 UGT3A1Q6NUS8 523 aa20.62■□□□□ 0.89
LSM6-207ENST00000515311 LRIG3Q6UXM1 1119 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 171.9 ms