RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 CCDC68Q9H2F9 335 aa11.8□□□□□ -0.52
PDLIM5-220ENST00000514830 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.8□□□□□ -0.52
PDLIM5-220ENST00000514830 KLQ9UEF7 1012 aa11.8□□□□□ -0.52
PDLIM5-220ENST00000514830 LGALS13Q9UHV8 139 aa11.8□□□□□ -0.52
PDLIM5-220ENST00000514830 ANKRD6Q9Y2G4 727 aa11.8□□□□□ -0.52
PDLIM5-220ENST00000514830 CRYL1Q9Y2S2 319 aa11.8□□□□□ -0.52
PDLIM5-220ENST00000514830 MED16Q9Y2X0 877 aa11.8□□□□□ -0.52
PDLIM5-220ENST00000514830 TMEM98Q9Y2Y6 226 aa11.8□□□□□ -0.52
PDLIM5-220ENST00000514830 PRSS21Q9Y6M0 314 aa11.8□□□□□ -0.52
PDLIM5-220ENST00000514830 ZNF292O60281 2723 aa11.8□□□□□ -0.52
PDLIM5-220ENST00000514830 TPRP12270 2363 aaKnown RBP11.79□□□□□ -0.52
PDLIM5-220ENST00000514830 VPS13AQ96RL7 3174 aa11.79□□□□□ -0.52
PDLIM5-220ENST00000514830 WDR87Q6ZQQ6 2873 aa11.79□□□□□ -0.52
PDLIM5-220ENST00000514830 TDRD6O60522 2096 aaKnown RBP11.79□□□□□ -0.52
PDLIM5-220ENST00000514830 UBA6A0AVT1 1052 aaPredicted RBP11.79□□□□□ -0.52
PDLIM5-220ENST00000514830 HMX2A2RU54 273 aa11.79□□□□□ -0.52
PDLIM5-220ENST00000514830 POC1B-GALNT4F8VUJ3 575 aa11.79□□□□□ -0.52
PDLIM5-220ENST00000514830 EIF3FO00303 357 aaPredicted RBP11.79□□□□□ -0.52
PDLIM5-220ENST00000514830 RASGRF2O14827 1237 aa11.79□□□□□ -0.52
PDLIM5-220ENST00000514830 GRID2O43424 1007 aa11.79□□□□□ -0.52
PDLIM5-220ENST00000514830 LRP3O75074 770 aa11.79□□□□□ -0.52
PDLIM5-220ENST00000514830 PIAS1O75925 651 aa11.79□□□□□ -0.52
PDLIM5-220ENST00000514830 KRT37O76014 449 aa11.79□□□□□ -0.52
PDLIM5-220ENST00000514830 ASMTLO95671 621 aa11.79□□□□□ -0.52
PDLIM5-220ENST00000514830 FDXRP22570 491 aa11.79□□□□□ -0.52
PDLIM5-220ENST00000514830 ATP5DP30049 168 aa11.79□□□□□ -0.52
PDLIM5-220ENST00000514830 FMO4P31512 558 aa11.79□□□□□ -0.52
PDLIM5-220ENST00000514830 MAGEA12P43365 314 aa11.79□□□□□ -0.52
PDLIM5-220ENST00000514830 CSNK1EP49674 416 aaKnown RBP11.79□□□□□ -0.52
PDLIM5-220ENST00000514830 HK3P52790 923 aa11.79□□□□□ -0.52
PDLIM5-220ENST00000514830 BNC1Q01954 994 aa11.79□□□□□ -0.52
PDLIM5-220ENST00000514830 PLOD1Q02809 727 aaPredicted RBP11.79□□□□□ -0.52
PDLIM5-220ENST00000514830 PPARDQ03181 441 aa11.79□□□□□ -0.52
PDLIM5-220ENST00000514830 GBX1Q14549 363 aa11.79□□□□□ -0.52
PDLIM5-220ENST00000514830 ZKSCAN8Q15776 578 aaPredicted RBP11.79□□□□□ -0.52
PDLIM5-220ENST00000514830 SMAD1Q15797 465 aaKnown RBP11.79□□□□□ -0.52
PDLIM5-220ENST00000514830 ZNF423Q2M1K9 1284 aa11.79□□□□□ -0.52
PDLIM5-220ENST00000514830 ZNF648Q5T619 568 aaPredicted RBP11.79□□□□□ -0.52
PDLIM5-220ENST00000514830 PTRHD1Q6GMV3 140 aaKnown RBP11.79□□□□□ -0.52
PDLIM5-220ENST00000514830 TMEM220Q6QAJ8 160 aa11.79□□□□□ -0.52
PDLIM5-220ENST00000514830 IL27RAQ6UWB1 636 aa11.79□□□□□ -0.52
PDLIM5-220ENST00000514830 TIFABQ6ZNK6 161 aa11.79□□□□□ -0.52
PDLIM5-220ENST00000514830 GALNT13Q8IUC8 556 aa11.79□□□□□ -0.52
PDLIM5-220ENST00000514830 PNPLA1Q8N8W4 532 aa11.79□□□□□ -0.52
PDLIM5-220ENST00000514830 OR2L2Q8NH16 312 aa11.79□□□□□ -0.52
PDLIM5-220ENST00000514830 SGF29Q96ES7 293 aa11.79□□□□□ -0.52
PDLIM5-220ENST00000514830 PDXPQ96GD0 296 aa11.79□□□□□ -0.52
PDLIM5-220ENST00000514830 ZIM3Q96PE6 472 aa11.79□□□□□ -0.52
PDLIM5-220ENST00000514830 OR2M4Q96R27 311 aa11.79□□□□□ -0.52
PDLIM5-220ENST00000514830 CCM2Q9BSQ5 444 aa11.79□□□□□ -0.52
PDLIM5-220ENST00000514830 TAS2R13Q9NYV9 303 aa11.79□□□□□ -0.52
PDLIM5-220ENST00000514830 NCDNQ9UBB6 729 aa11.79□□□□□ -0.52
PDLIM5-220ENST00000514830 PNMA8BQ9ULN7 279 aaPredicted RBP11.79□□□□□ -0.52
PDLIM5-220ENST00000514830 SUFUQ9UMX1 484 aa11.79□□□□□ -0.52
PDLIM5-220ENST00000514830 SLC6A14Q9UN76 642 aa11.79□□□□□ -0.52
PDLIM5-220ENST00000514830 VWA7Q9Y334 891 aa11.79□□□□□ -0.52
PDLIM5-220ENST00000514830 ADAMTS9Q9P2N4 1935 aa11.79□□□□□ -0.52
PDLIM5-220ENST00000514830 IQANK1A0A1B0GTG1 560 aa11.78□□□□□ -0.52
PDLIM5-220ENST00000514830 A0A1B0GVT2 93 aa11.78□□□□□ -0.52
PDLIM5-220ENST00000514830 FAM95CA0A1B0GW59 222 aa11.78□□□□□ -0.52
PDLIM5-220ENST00000514830 MGAT4DA6NG13 374 aa11.78□□□□□ -0.52
PDLIM5-220ENST00000514830 OR2AG2A6NM03 316 aa11.78□□□□□ -0.52
PDLIM5-220ENST00000514830 MAP2K7O14733 419 aa11.78□□□□□ -0.52
PDLIM5-220ENST00000514830 LIN7AO14910 233 aaPredicted RBP11.78□□□□□ -0.52
PDLIM5-220ENST00000514830 YKT6O15498 198 aa11.78□□□□□ -0.52
PDLIM5-220ENST00000514830 WISP3O95389 354 aaPredicted RBP11.78□□□□□ -0.52
PDLIM5-220ENST00000514830 TNFP01375 233 aa11.78□□□□□ -0.52
PDLIM5-220ENST00000514830 SNRPAP09012 282 aaKnown RBP11.78□□□□□ -0.52
PDLIM5-220ENST00000514830 AOAHP28039 575 aa11.78□□□□□ -0.52
PDLIM5-220ENST00000514830 MPLP40238 635 aa11.78□□□□□ -0.52
PDLIM5-220ENST00000514830 SLC26A3P40879 764 aa11.78□□□□□ -0.52
PDLIM5-220ENST00000514830 CLCN7P51798 805 aa11.78□□□□□ -0.52
PDLIM5-220ENST00000514830 ARHGAP8P85298 464 aa11.78□□□□□ -0.52
PDLIM5-220ENST00000514830 TIAL1Q01085 375 aaKnown RBP eCLIP11.78□□□□□ -0.524e-8■■■■□ 22.5
PDLIM5-220ENST00000514830 ZNF844Q08AG5 666 aa11.78□□□□□ -0.52
PDLIM5-220ENST00000514830 IFFO1Q0D2I5 559 aa11.78□□□□□ -0.52
PDLIM5-220ENST00000514830 RPA4Q13156 261 aa11.78□□□□□ -0.52
PDLIM5-220ENST00000514830 PLEKHS1Q5SXH7 462 aa11.78□□□□□ -0.52
PDLIM5-220ENST00000514830 RBM20Q5T481 1227 aaKnown RBP11.78□□□□□ -0.52
PDLIM5-220ENST00000514830 HECTD2Q5U5R9 776 aa11.78□□□□□ -0.52
PDLIM5-220ENST00000514830 UGT3A1Q6NUS8 523 aa11.78□□□□□ -0.52
PDLIM5-220ENST00000514830 DOK6Q6PKX4 331 aa11.78□□□□□ -0.52
PDLIM5-220ENST00000514830 AMZ2Q86W34 360 aa11.78□□□□□ -0.52
PDLIM5-220ENST00000514830 TRAPPC5Q8IUR0 188 aa11.78□□□□□ -0.52
PDLIM5-220ENST00000514830 PHACTR4Q8IZ21 702 aa11.78□□□□□ -0.52
PDLIM5-220ENST00000514830 HM13Q8TCT9 377 aa11.78□□□□□ -0.52
PDLIM5-220ENST00000514830 GPBAR1Q8TDU6 330 aa11.78□□□□□ -0.52
PDLIM5-220ENST00000514830 MZB1Q8WU39 189 aa11.78□□□□□ -0.52
PDLIM5-220ENST00000514830 TSPAN17Q96FV3 270 aa11.78□□□□□ -0.52
PDLIM5-220ENST00000514830 CYP4F12Q9HCS2 524 aa11.78□□□□□ -0.52
PDLIM5-220ENST00000514830 SPATS2LQ9NUQ6 558 aaKnown RBP11.78□□□□□ -0.52
PDLIM5-220ENST00000514830 GULP1Q9UBP9 304 aa11.78□□□□□ -0.52
PDLIM5-220ENST00000514830 MTO1Q9Y2Z2 717 aaKnown RBP11.78□□□□□ -0.52
PDLIM5-220ENST00000514830 DHRS7Q9Y394 339 aa11.78□□□□□ -0.52
PDLIM5-220ENST00000514830 PCYT1BQ9Y5K3 369 aaPredicted RBP11.78□□□□□ -0.52
PDLIM5-220ENST00000514830 OTOGLQ3ZCN5 2332 aa11.78□□□□□ -0.52
PDLIM5-220ENST00000514830 ATXN2Q99700 1313 aaKnown RBP11.78□□□□□ -0.52
PDLIM5-220ENST00000514830 ARHGEF17Q96PE2 2063 aaPredicted RBP11.77□□□□□ -0.52
PDLIM5-220ENST00000514830 FRYLO94915 3013 aa11.77□□□□□ -0.52
PDLIM5-220ENST00000514830 SLC5A10A0PJK1 596 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms