RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 ZCCHC8Q6NZY4 707 aaKnown RBP13.01□□□□□ -0.33
TCOF1-213ENST00000514442 PRR23CQ6ZRP0 262 aa13.01□□□□□ -0.33
TCOF1-213ENST00000514442 HFE2Q6ZVN8 426 aa13.01□□□□□ -0.33
TCOF1-213ENST00000514442 CYP4V2Q6ZWL3 525 aaPredicted RBP13.01□□□□□ -0.33
TCOF1-213ENST00000514442 SLC35B2Q8TB61 432 aa13.01□□□□□ -0.33
TCOF1-213ENST00000514442 COPS8Q99627 209 aa13.01□□□□□ -0.33
TCOF1-213ENST00000514442 RERGLQ9H628 205 aa13.01□□□□□ -0.33
TCOF1-213ENST00000514442 INTS10Q9NVR2 710 aaKnown RBP13.01□□□□□ -0.33
TCOF1-213ENST00000514442 RABL2AQ9UBK7 228 aaPredicted RBP13.01□□□□□ -0.33
TCOF1-213ENST00000514442 GPSM3Q9Y4H4 160 aa13.01□□□□□ -0.33
TCOF1-213ENST00000514442 C4BP0C0L5 1744 aa13.01□□□□□ -0.33
TCOF1-213ENST00000514442 PRKD3O94806 890 aa13.01□□□□□ -0.33
TCOF1-213ENST00000514442 SLC25A14O95258 325 aaPredicted RBP13.01□□□□□ -0.33
TCOF1-213ENST00000514442 NTRK1P04629 796 aa13.01□□□□□ -0.33
TCOF1-213ENST00000514442 HNRNPFP52597 415 aaKnown RBP13.01□□□□□ -0.33
TCOF1-213ENST00000514442 CYP4F8P98187 520 aa13.01□□□□□ -0.33
TCOF1-213ENST00000514442 TGM3Q08188 693 aa13.01□□□□□ -0.33
TCOF1-213ENST00000514442 CPSF6Q16630 551 aaKnown RBP eCLIP13.01□□□□□ -0.33
TCOF1-213ENST00000514442 ZYG11AQ6WRX3 759 aa13.01□□□□□ -0.33
TCOF1-213ENST00000514442 GALNT6Q8NCL4 622 aa13.01□□□□□ -0.33
TCOF1-213ENST00000514442 ROPN1LQ96C74 230 aa13.01□□□□□ -0.33
TCOF1-213ENST00000514442 SLC39A8Q9C0K1 460 aa13.01□□□□□ -0.33
TCOF1-213ENST00000514442 CDV3Q9UKY7 258 aaKnown RBP13.01□□□□□ -0.33
TCOF1-213ENST00000514442 CDC14AQ9UNH5 594 aa13.01□□□□□ -0.33
TCOF1-213ENST00000514442 RPP40O75818 363 aaKnown RBP13□□□□□ -0.33
TCOF1-213ENST00000514442 RPN2P04844 631 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 ELFN1P0C7U0 828 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 CDH1P12830 882 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 RRM2P31350 389 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 NDST2P52849 883 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 OGDHQ02218 1023 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 GRM3Q14832 879 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 ARHGAP36Q6ZRI8 547 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 GPRIN3Q6ZVF9 776 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 GALNT12Q8IXK2 581 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 REM2Q8IYK8 340 aaPredicted RBP13□□□□□ -0.33
TCOF1-213ENST00000514442 GPR156Q8NFN8 814 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 SMG7Q92540 1137 aaKnown RBP13□□□□□ -0.33
TCOF1-213ENST00000514442 MYDGFQ969H8 173 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 ZFYVE1Q9HBF4 777 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 MPPE1Q53F39 396 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 ESRP1Q6NXG1 681 aaKnown RBP13□□□□□ -0.33
TCOF1-213ENST00000514442 C16orf62Q7Z3J2 963 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 RASAL3Q86YV0 1011 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 RTL3Q8N8U3 475 aaKnown RBP13□□□□□ -0.33
TCOF1-213ENST00000514442 REPS1Q96D71 796 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 OR52B2Q96RD2 323 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 GATA5Q9BWX5 397 aaPredicted RBP13□□□□□ -0.33
TCOF1-213ENST00000514442 BRD9Q9H8M2 597 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 CNTN3Q9P232 1028 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 SRRDQ9UH36 339 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 PCDHGA3Q9Y5H0 932 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 PCDHGA10Q9Y5H3 936 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 MYH15Q9Y2K3 1946 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 NUP98P52948 1817 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 A0A0J9YYE9 177 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 AQP12BA6NM10 295 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 FAM47E-STBD1D6RA91 191 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 FAM187BQ17R55 369 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 ERMP1Q7Z2K6 904 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 OSTM1Q86WC4 334 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 AQP12AQ8IXF9 295 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 TMEM132CQ8N3T6 1108 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 PIK3R3Q92569 461 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 TCF25Q9BQ70 676 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 RHBGQ9H310 441 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 TPK1Q9H3S4 243 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 SIX4Q9UIU6 781 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 ADAM30Q9UKF2 790 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 GABRQQ9UN88 632 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 ING4Q9UNL4 249 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 INVSQ9Y283 1065 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 PEX16Q9Y5Y5 336 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 CXorf49A8MYA2 514 aaPredicted RBP13□□□□□ -0.33
TCOF1-213ENST00000514442 MATN3O15232 486 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 METTL18O95568 372 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 F2P00734 622 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 TLE2Q04725 743 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 CANT1Q8WVQ1 401 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 RPL10LQ96L21 214 aaKnown RBP13□□□□□ -0.33
TCOF1-213ENST00000514442 BBS4Q96RK4 519 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 PIGVQ9NUD9 493 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 CD84Q9UIB8 345 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 MAGEL2Q9UJ55 1249 aa13□□□□□ -0.33
TCOF1-213ENST00000514442 ANKDD1BA6NHY2 528 aa12.99□□□□□ -0.33
TCOF1-213ENST00000514442 ZSCAN5BA6NJL1 495 aa12.99□□□□□ -0.33
TCOF1-213ENST00000514442 ULK1O75385 1050 aa12.99□□□□□ -0.33
TCOF1-213ENST00000514442 RNASEH2AO75792 299 aaKnown RBP12.99□□□□□ -0.33
TCOF1-213ENST00000514442 YES1P07947 543 aa12.99□□□□□ -0.33
TCOF1-213ENST00000514442 F7P08709 466 aaPredicted RBP12.99□□□□□ -0.33
TCOF1-213ENST00000514442 ZNF37AP17032 561 aaPredicted RBP12.99□□□□□ -0.33
TCOF1-213ENST00000514442 ZNF460Q14592 562 aa12.99□□□□□ -0.33
TCOF1-213ENST00000514442 PLA2G4EQ3MJ16 856 aa12.99□□□□□ -0.33
TCOF1-213ENST00000514442 ELMOD2Q8IZ81 293 aa12.99□□□□□ -0.33
TCOF1-213ENST00000514442 RBFAQ8N0V3 343 aa12.99□□□□□ -0.33
TCOF1-213ENST00000514442 FAM124BQ9H5Z6 455 aaPredicted RBP12.99□□□□□ -0.33
TCOF1-213ENST00000514442 TSPAN4O14817 238 aa12.99□□□□□ -0.33
TCOF1-213ENST00000514442 GRM6O15303 877 aa12.99□□□□□ -0.33
TCOF1-213ENST00000514442 AP1G1O43747 822 aa12.99□□□□□ -0.33
TCOF1-213ENST00000514442 TRIP4Q15650 581 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms