RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 ESRRBO95718 433 aa14.73□□□□□ -0.05
VCAN-211ENST00000513984 PRNPP04156 253 aa14.73□□□□□ -0.05
VCAN-211ENST00000513984 OR56A5P0C7T3 313 aa14.73□□□□□ -0.05
VCAN-211ENST00000513984 XPAP23025 273 aaPredicted RBP14.73□□□□□ -0.05
VCAN-211ENST00000513984 FCHO2Q0JRZ9 810 aa14.73□□□□□ -0.05
VCAN-211ENST00000513984 CDC16Q13042 620 aa14.73□□□□□ -0.05
VCAN-211ENST00000513984 CUL3Q13618 768 aa14.73□□□□□ -0.05
VCAN-211ENST00000513984 CYLC2Q14093 348 aaPredicted RBP14.73□□□□□ -0.05
VCAN-211ENST00000513984 SQLEQ14534 574 aa14.73□□□□□ -0.05
VCAN-211ENST00000513984 HNRNPA1L2Q32P51 320 aaKnown RBP14.73□□□□□ -0.05
VCAN-211ENST00000513984 FAM219BQ5XKK7 198 aa14.73□□□□□ -0.05
VCAN-211ENST00000513984 TANGO2Q6ICL3 276 aa14.73□□□□□ -0.05
VCAN-211ENST00000513984 VITQ6UXI7 678 aa14.73□□□□□ -0.05
VCAN-211ENST00000513984 PARS2Q7L3T8 475 aaKnown RBP14.73□□□□□ -0.05
VCAN-211ENST00000513984 OR56A4Q8NGH8 313 aa14.73□□□□□ -0.05
VCAN-211ENST00000513984 NUSAP1Q9BXS6 441 aaKnown RBP14.73□□□□□ -0.05
VCAN-211ENST00000513984 SLC28A3Q9HAS3 691 aa14.73□□□□□ -0.05
VCAN-211ENST00000513984 RNPEPL1Q9HAU8 725 aa14.73□□□□□ -0.05
VCAN-211ENST00000513984 ZFP14Q9HCL3 533 aa14.73□□□□□ -0.05
VCAN-211ENST00000513984 UTP6Q9NYH9 597 aaKnown RBP14.73□□□□□ -0.05
VCAN-211ENST00000513984 EIF2B4Q9UI10 523 aaKnown RBP14.73□□□□□ -0.05
VCAN-211ENST00000513984 CDH7Q9ULB5 785 aa14.73□□□□□ -0.05
VCAN-211ENST00000513984 ASB1Q9Y576 335 aa14.73□□□□□ -0.05
VCAN-211ENST00000513984 TNPO3Q9Y5L0 923 aaKnown RBP14.73□□□□□ -0.05
VCAN-211ENST00000513984 ENTPD5O75356 428 aa14.72□□□□□ -0.05
VCAN-211ENST00000513984 S100BP04271 92 aaPredicted RBP14.72□□□□□ -0.05
VCAN-211ENST00000513984 CD1EP15812 388 aa14.72□□□□□ -0.05
VCAN-211ENST00000513984 ATP4BP51164 291 aa14.72□□□□□ -0.05
VCAN-211ENST00000513984 GBX1Q14549 363 aa14.72□□□□□ -0.05
VCAN-211ENST00000513984 KPNB1Q14974 876 aaKnown RBP14.72□□□□□ -0.05
VCAN-211ENST00000513984 FNDC3BQ53EP0 1204 aaKnown RBP14.72□□□□□ -0.05
VCAN-211ENST00000513984 SYCE2Q6PIF2 218 aa14.72□□□□□ -0.05
VCAN-211ENST00000513984 Q6ZVL8 140 aa14.72□□□□□ -0.05
VCAN-211ENST00000513984 NET1Q7Z628 596 aaPredicted RBP14.72□□□□□ -0.05
VCAN-211ENST00000513984 TECPR1Q7Z6L1 1165 aa14.72□□□□□ -0.05
VCAN-211ENST00000513984 TRAM1L1Q8N609 369 aa14.72□□□□□ -0.05
VCAN-211ENST00000513984 ENDOVQ8N8Q3 282 aaKnown RBP14.72□□□□□ -0.05
VCAN-211ENST00000513984 TERB1Q8NA31 727 aa14.72□□□□□ -0.05
VCAN-211ENST00000513984 TMIEQ8NEW7 156 aa14.72□□□□□ -0.05
VCAN-211ENST00000513984 WDR60Q8WVS4 1066 aa14.72□□□□□ -0.05
VCAN-211ENST00000513984 SCAMP4Q969E2 229 aa14.72□□□□□ -0.05
VCAN-211ENST00000513984 C3orf30Q96M34 536 aa14.72□□□□□ -0.05
VCAN-211ENST00000513984 KCNA7Q96RP8 456 aa14.72□□□□□ -0.05
VCAN-211ENST00000513984 ZNF382Q96SR6 550 aa14.72□□□□□ -0.05
VCAN-211ENST00000513984 HGH1Q9BTY7 390 aa14.72□□□□□ -0.05
VCAN-211ENST00000513984 ZSCAN5AQ9BUG6 496 aa14.72□□□□□ -0.05
VCAN-211ENST00000513984 RDH14Q9HBH5 336 aa14.72□□□□□ -0.05
VCAN-211ENST00000513984 CD248Q9HCU0 757 aa14.72□□□□□ -0.05
VCAN-211ENST00000513984 SLC7A8Q9UHI5 535 aa14.72□□□□□ -0.05
VCAN-211ENST00000513984 ZNF225Q9UK10 706 aa14.72□□□□□ -0.05
VCAN-211ENST00000513984 ADAMTS6Q9UKP5 1117 aa14.72□□□□□ -0.05
VCAN-211ENST00000513984 ZFC3H1O60293 1989 aaKnown RBP14.72□□□□□ -0.05
VCAN-211ENST00000513984 CKAP5Q14008 2032 aa14.71□□□□□ -0.05
VCAN-211ENST00000513984 PSMD11O00231 422 aa14.71□□□□□ -0.05
VCAN-211ENST00000513984 PIP5K1BO14986 540 aa14.71□□□□□ -0.05
VCAN-211ENST00000513984 LMNAP02545 664 aaKnown RBP14.71□□□□□ -0.05
VCAN-211ENST00000513984 ENO3P13929 434 aaPredicted RBP14.71□□□□□ -0.05
VCAN-211ENST00000513984 ATP1B2P14415 290 aaPredicted RBP14.71□□□□□ -0.05
VCAN-211ENST00000513984 AOAHP28039 575 aa14.71□□□□□ -0.05
VCAN-211ENST00000513984 ETV3P41162 512 aa14.71□□□□□ -0.05
VCAN-211ENST00000513984 PKNOX1P55347 436 aa14.71□□□□□ -0.05
VCAN-211ENST00000513984 PTK2BQ14289 1009 aa14.71□□□□□ -0.05
VCAN-211ENST00000513984 TRMT5Q32P41 509 aaKnown RBP14.71□□□□□ -0.05
VCAN-211ENST00000513984 C9orf64Q5T6V5 341 aa14.71□□□□□ -0.05
VCAN-211ENST00000513984 ANKRD54Q6NXT1 300 aa14.71□□□□□ -0.05
VCAN-211ENST00000513984 ERAP2Q6P179 960 aa14.71□□□□□ -0.05
VCAN-211ENST00000513984 LIPIQ6XZB0 460 aa14.71□□□□□ -0.05
VCAN-211ENST00000513984 EFL1Q7Z2Z2 1120 aaKnown RBP14.71□□□□□ -0.05
VCAN-211ENST00000513984 SYVN1Q86TM6 617 aa14.71□□□□□ -0.05
VCAN-211ENST00000513984 RAVER1Q8IY67 606 aaKnown RBP14.71□□□□□ -0.05
VCAN-211ENST00000513984 CPA6Q8N4T0 437 aa14.71□□□□□ -0.05
VCAN-211ENST00000513984 DDHD1Q8NEL9 900 aa14.71□□□□□ -0.05
VCAN-211ENST00000513984 HMGCLL1Q8TB92 370 aa14.71□□□□□ -0.05
VCAN-211ENST00000513984 OR8D1Q8WZ84 308 aa14.71□□□□□ -0.05
VCAN-211ENST00000513984 CLPTM1LQ96KA5 538 aa14.71□□□□□ -0.05
VCAN-211ENST00000513984 ABCG8Q9H221 673 aa14.71□□□□□ -0.05
VCAN-211ENST00000513984 TMEM245Q9H330 911 aa14.71□□□□□ -0.05
VCAN-211ENST00000513984 TUBB1Q9H4B7 451 aa14.71□□□□□ -0.05
VCAN-211ENST00000513984 TSR3Q9UJK0 312 aaKnown RBP14.71□□□□□ -0.05
VCAN-211ENST00000513984 PTBP2Q9UKA9 531 aaKnown RBP14.71□□□□□ -0.05
VCAN-211ENST00000513984 SARDHQ9UL12 918 aa14.71□□□□□ -0.05
VCAN-211ENST00000513984 KPNA3O00505 521 aaPredicted RBP14.71□□□□□ -0.06
VCAN-211ENST00000513984 LINC01565O15544 149 aa14.71□□□□□ -0.06
VCAN-211ENST00000513984 GPC4O75487 556 aa14.71□□□□□ -0.06
VCAN-211ENST00000513984 CIB2O75838 187 aa14.71□□□□□ -0.06
VCAN-211ENST00000513984 UROSP10746 265 aa14.71□□□□□ -0.06
VCAN-211ENST00000513984 ITGB7P26010 798 aa14.71□□□□□ -0.06
VCAN-211ENST00000513984 PRDX3P30048 256 aaKnown RBP14.71□□□□□ -0.06
VCAN-211ENST00000513984 CCR7P32248 378 aa14.71□□□□□ -0.06
VCAN-211ENST00000513984 OPRD1P41143 372 aa14.71□□□□□ -0.06
VCAN-211ENST00000513984 HYAL1Q12794 435 aa14.71□□□□□ -0.06
VCAN-211ENST00000513984 ZNF234Q14588 700 aa14.71□□□□□ -0.06
VCAN-211ENST00000513984 RBBP7Q16576 425 aa14.71□□□□□ -0.06
VCAN-211ENST00000513984 PGM2L1Q6PCE3 622 aa14.71□□□□□ -0.06
VCAN-211ENST00000513984 GPRIN3Q6ZVF9 776 aa14.71□□□□□ -0.06
VCAN-211ENST00000513984 PHYKPLQ8IUZ5 450 aa14.71□□□□□ -0.06
VCAN-211ENST00000513984 DEFB107AQ8IZN7 70 aa14.71□□□□□ -0.06
VCAN-211ENST00000513984 UBTD2Q8WUN7 234 aa14.71□□□□□ -0.06
VCAN-211ENST00000513984 DLG3Q92796 817 aa14.71□□□□□ -0.06
VCAN-211ENST00000513984 ESAMQ96AP7 390 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms