RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 ZDHHC5Q9C0B5 715 aa11.15□□□□□ -0.62
HTT-213ENST00000513806 PHACTR1Q9C0D0 580 aa11.15□□□□□ -0.62
HTT-213ENST00000513806 P2RY12Q9H244 342 aa11.15□□□□□ -0.62
HTT-213ENST00000513806 EPB41L4BQ9H329 900 aa11.15□□□□□ -0.62
HTT-213ENST00000513806 SARS2Q9NP81 518 aaKnown RBP11.15□□□□□ -0.62
HTT-213ENST00000513806 PRDM8Q9NQV8 689 aa11.15□□□□□ -0.62
HTT-213ENST00000513806 SPATS2LQ9NUQ6 558 aaKnown RBP11.15□□□□□ -0.62
HTT-213ENST00000513806 SPASTQ9UBP0 616 aa11.15□□□□□ -0.62
HTT-213ENST00000513806 GULP1Q9UBP9 304 aa11.15□□□□□ -0.62
HTT-213ENST00000513806 CFAP54Q96N23 3096 aa11.14□□□□□ -0.63
HTT-213ENST00000513806 PRAMEF33A0A0G2JMD5 474 aa11.14□□□□□ -0.63
HTT-213ENST00000513806 FAM159BA6NKW6 160 aa11.14□□□□□ -0.63
HTT-213ENST00000513806 B4DGG1 531 aa11.14□□□□□ -0.63
HTT-213ENST00000513806 CFAP99D6REC4 459 aa11.14□□□□□ -0.63
HTT-213ENST00000513806 PRMT5O14744 637 aaPredicted RBP11.14□□□□□ -0.63
HTT-213ENST00000513806 KMOO15229 486 aa11.14□□□□□ -0.63
HTT-213ENST00000513806 CASC3O15234 703 aaKnown RBP11.14□□□□□ -0.63
HTT-213ENST00000513806 YY2O15391 372 aa11.14□□□□□ -0.63
HTT-213ENST00000513806 SH3BP5O60239 455 aa11.14□□□□□ -0.63
HTT-213ENST00000513806 TRIM16O95361 564 aa11.14□□□□□ -0.63
HTT-213ENST00000513806 RALBP11234 206 aa11.14□□□□□ -0.63
HTT-213ENST00000513806 CD59P13987 128 aa11.14□□□□□ -0.63
HTT-213ENST00000513806 RPL10P27635 214 aaKnown RBP11.14□□□□□ -0.63
HTT-213ENST00000513806 GMPRP36959 345 aa11.14□□□□□ -0.63
HTT-213ENST00000513806 ACTR1BP42025 376 aa11.14□□□□□ -0.63
HTT-213ENST00000513806 NSG1P42857 185 aa11.14□□□□□ -0.63
HTT-213ENST00000513806 PREPP48147 710 aa11.14□□□□□ -0.63
HTT-213ENST00000513806 PRLHRP49683 370 aa11.14□□□□□ -0.63
HTT-213ENST00000513806 ACTR1AP61163 376 aa11.14□□□□□ -0.63
HTT-213ENST00000513806 UAP1Q16222 522 aaPredicted RBP11.14□□□□□ -0.63
HTT-213ENST00000513806 BCL7AQ4VC05 210 aa11.14□□□□□ -0.63
HTT-213ENST00000513806 AARS2Q5JTZ9 985 aaKnown RBP11.14□□□□□ -0.63
HTT-213ENST00000513806 LYPLAL1Q5VWZ2 237 aa11.14□□□□□ -0.63
HTT-213ENST00000513806 ARMC3Q5W041 872 aa11.14□□□□□ -0.63
HTT-213ENST00000513806 PTRHD1Q6GMV3 140 aaKnown RBP11.14□□□□□ -0.63
HTT-213ENST00000513806 PACS1Q6VY07 963 aa11.14□□□□□ -0.63
HTT-213ENST00000513806 CERS6Q6ZMG9 384 aa11.14□□□□□ -0.63
HTT-213ENST00000513806 STRA8Q7Z7C7 330 aa11.14□□□□□ -0.63
HTT-213ENST00000513806 CNTN4Q8IWV2 1026 aa11.14□□□□□ -0.63
HTT-213ENST00000513806 CTAGE3PQ8IX95 158 aa11.14□□□□□ -0.63
HTT-213ENST00000513806 CFAP206Q8IYR0 622 aa11.14□□□□□ -0.63
HTT-213ENST00000513806 OXR1Q8N573 874 aa11.14□□□□□ -0.63
HTT-213ENST00000513806 PPM1NQ8N819 430 aa11.14□□□□□ -0.63
HTT-213ENST00000513806 GPBAR1Q8TDU6 330 aa11.14□□□□□ -0.63
HTT-213ENST00000513806 SETD7Q8WTS6 366 aaKnown RBP11.14□□□□□ -0.63
HTT-213ENST00000513806 UBLCP1Q8WVY7 318 aaPredicted RBP11.14□□□□□ -0.63
HTT-213ENST00000513806 FAM122AQ96E09 287 aa11.14□□□□□ -0.63
HTT-213ENST00000513806 SLC30A3Q99726 388 aa11.14□□□□□ -0.63
HTT-213ENST00000513806 ZCCHC2Q9C0B9 1178 aaKnown RBP11.14□□□□□ -0.63
HTT-213ENST00000513806 DNAAF2Q9NVR5 837 aaKnown RBP11.14□□□□□ -0.63
HTT-213ENST00000513806 SCHIP1Q9P0W5 487 aaPredicted RBP11.14□□□□□ -0.63
HTT-213ENST00000513806 TAAR2Q9P1P5 351 aa11.14□□□□□ -0.63
HTT-213ENST00000513806 ZFATQ9P243 1243 aa11.14□□□□□ -0.63
HTT-213ENST00000513806 TBC1D29Q9UFV1 150 aa11.14□□□□□ -0.63
HTT-213ENST00000513806 RABGEF1Q9UJ41 708 aa11.14□□□□□ -0.63
HTT-213ENST00000513806 PSMD13Q9UNM6 376 aa11.14□□□□□ -0.63
HTT-213ENST00000513806 DOLKQ9UPQ8 538 aa11.14□□□□□ -0.63
HTT-213ENST00000513806 WDR37Q9Y2I8 494 aa11.14□□□□□ -0.63
HTT-213ENST00000513806 PCNX2A6NKB5 2137 aa11.14□□□□□ -0.63
HTT-213ENST00000513806 RIPK2O43353 540 aa11.13□□□□□ -0.63
HTT-213ENST00000513806 ANXA6P08133 673 aa11.13□□□□□ -0.63
HTT-213ENST00000513806 SAT1P21673 171 aa11.13□□□□□ -0.63
HTT-213ENST00000513806 PDHA2P29803 388 aa11.13□□□□□ -0.63
HTT-213ENST00000513806 CCR7P32248 378 aa11.13□□□□□ -0.63
HTT-213ENST00000513806 LEPRP48357 1165 aaKnown RBP11.13□□□□□ -0.63
HTT-213ENST00000513806 BLKP51451 505 aa11.13□□□□□ -0.63
HTT-213ENST00000513806 CDKN2DP55273 166 aa11.13□□□□□ -0.63
HTT-213ENST00000513806 MAZP56270 477 aaKnown RBP11.13□□□□□ -0.63
HTT-213ENST00000513806 ARHGAP8P85298 464 aa11.13□□□□□ -0.63
HTT-213ENST00000513806 TIAL1Q01085 375 aaKnown RBP eCLIP11.13□□□□□ -0.63
HTT-213ENST00000513806 BOP1Q14137 746 aaKnown RBP11.13□□□□□ -0.63
HTT-213ENST00000513806 DUS1LQ6P1R4 473 aaKnown RBP11.13□□□□□ -0.63
HTT-213ENST00000513806 WDR93Q6P2C0 686 aa11.13□□□□□ -0.63
HTT-213ENST00000513806 PIM3Q86V86 326 aa11.13□□□□□ -0.63
HTT-213ENST00000513806 AMZ2Q86W34 360 aa11.13□□□□□ -0.63
HTT-213ENST00000513806 RELL1Q8IUW5 271 aa11.13□□□□□ -0.63
HTT-213ENST00000513806 VRK3Q8IV63 474 aa11.13□□□□□ -0.63
HTT-213ENST00000513806 KYQ8NBH2 561 aa11.13□□□□□ -0.63
HTT-213ENST00000513806 FAM46DQ8NEK8 389 aa11.13□□□□□ -0.63
HTT-213ENST00000513806 SPDYE1Q8NFV5 336 aaPredicted RBP11.13□□□□□ -0.63
HTT-213ENST00000513806 CALML6Q8TD86 181 aa11.13□□□□□ -0.63
HTT-213ENST00000513806 AENQ8WTP8 325 aaKnown RBP11.13□□□□□ -0.63
HTT-213ENST00000513806 ELMO1Q92556 727 aa11.13□□□□□ -0.63
HTT-213ENST00000513806 CCM2Q9BSQ5 444 aa11.13□□□□□ -0.63
HTT-213ENST00000513806 RMI1Q9H9A7 625 aa11.13□□□□□ -0.63
HTT-213ENST00000513806 TRNAU1APQ9NX07 287 aaKnown RBP11.13□□□□□ -0.63
HTT-213ENST00000513806 MED16Q9Y2X0 877 aa11.13□□□□□ -0.63
HTT-213ENST00000513806 CFAP20Q9Y6A4 193 aaKnown RBP11.13□□□□□ -0.63
HTT-213ENST00000513806 CEP250Q9BV73 2442 aa11.12□□□□□ -0.63
HTT-213ENST00000513806 LMO7DNF2Z398 122 aa11.12□□□□□ -0.63
HTT-213ENST00000513806 POC1B-GALNT4F8VUJ3 575 aa11.12□□□□□ -0.63
HTT-213ENST00000513806 SIGLEC6O43699 453 aa11.12□□□□□ -0.63
HTT-213ENST00000513806 AP2A2O94973 939 aa11.12□□□□□ -0.63
HTT-213ENST00000513806 SHBGP04278 402 aa11.12□□□□□ -0.63
HTT-213ENST00000513806 GSTA2P09210 222 aa11.12□□□□□ -0.63
HTT-213ENST00000513806 OR56A5P0C7T3 313 aa11.12□□□□□ -0.63
HTT-213ENST00000513806 PKMP14618 531 aaKnown RBP11.12□□□□□ -0.63
HTT-213ENST00000513806 STX2P32856 288 aa11.12□□□□□ -0.63
HTT-213ENST00000513806 PLA2G5P39877 138 aa11.12□□□□□ -0.63
HTT-213ENST00000513806 CD151P48509 253 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms