RNA–Protein interactions for RNA: ENST00000513405.1

AP001999.1-201, humanhuman

TSL 2 BASIC

Gene AP001999.1, Length 3,684 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001999.1-201ENST00000513405 NANOGQ9H9S0 305 aa13.51□□□□□ -0.25
AP001999.1-201ENST00000513405 PTTG2Q9NZH5 202 aa13.51□□□□□ -0.25
AP001999.1-201ENST00000513405 ZNF490Q9ULM2 529 aaPredicted RBP13.51□□□□□ -0.25
AP001999.1-201ENST00000513405 ARID1BQ8NFD5 2236 aaPredicted RBP13.51□□□□□ -0.25
AP001999.1-201ENST00000513405 BCL10O95999 233 aa13.51□□□□□ -0.25
AP001999.1-201ENST00000513405 OCM2P0CE71 109 aa13.51□□□□□ -0.25
AP001999.1-201ENST00000513405 OCMP0CE72 109 aaPredicted RBP13.51□□□□□ -0.25
AP001999.1-201ENST00000513405 ITGALP20701 1170 aa13.51□□□□□ -0.25
AP001999.1-201ENST00000513405 IL10RBQ08334 325 aa13.51□□□□□ -0.25
AP001999.1-201ENST00000513405 UAP1L1Q3KQV9 507 aa13.51□□□□□ -0.25
AP001999.1-201ENST00000513405 RTP2Q5QGT7 225 aa13.51□□□□□ -0.25
AP001999.1-201ENST00000513405 CACHD1Q5VU97 1274 aa13.51□□□□□ -0.25
AP001999.1-201ENST00000513405 TXNDC8Q6A555 127 aa13.51□□□□□ -0.25
AP001999.1-201ENST00000513405 PRR23BQ6ZRT6 265 aa13.51□□□□□ -0.25
AP001999.1-201ENST00000513405 MICU2Q8IYU8 434 aa13.51□□□□□ -0.25
AP001999.1-201ENST00000513405 OR4F6Q8NGB9 312 aa13.51□□□□□ -0.25
AP001999.1-201ENST00000513405 CENPNQ96H22 339 aaPredicted RBP13.51□□□□□ -0.25
AP001999.1-201ENST00000513405 SUCOQ9UBS9 1254 aaKnown RBP13.51□□□□□ -0.25
AP001999.1-201ENST00000513405 RAD51BO15315 384 aa13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 SMIM18P0DKX4 95 aa13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 PPM1FP49593 454 aaPredicted RBP13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 ANKS3Q6ZW76 656 aa13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 SERPINA9Q86WD7 417 aa13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 FIBCD1Q8N539 461 aa13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 NKAPQ8N5F7 415 aaKnown RBP13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 COMMD8Q9NX08 183 aa13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 SMPD3Q9NY59 655 aaPredicted RBP13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 MAP10Q9P2G4 905 aa13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 MYO10Q9HD67 2058 aa13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 PRSS51A0A1B0GVH4 220 aa13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 CLDN7O95471 211 aa13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 GLUD1P00367 558 aa13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 ZNF7P17097 686 aaPredicted RBP13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 INHBCP55103 352 aa13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 C21orf59P57076 290 aa13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 UBE3AQ05086 875 aa13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 ABRQ12979 859 aa13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 SF1Q15637 639 aaKnown RBP13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 TRIP4Q15650 581 aaPredicted RBP13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 SPANXN4Q5MJ08 99 aa13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 FAM171BQ6P995 826 aa13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 LRRC8DQ7L1W4 858 aa13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 SERINC5Q86VE9 423 aa13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 RNF175Q8N4F7 328 aa13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 TMEM102Q8N9M5 508 aaPredicted RBP13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 PSD4Q8NDX1 1056 aa13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 PTCD2Q8WV60 388 aaKnown RBP13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 SMAD5Q99717 465 aaKnown RBP13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 HOPXQ9BPY8 73 aaPredicted RBP13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 MAF1Q9H063 256 aa13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 MEAF6Q9HAF1 191 aa13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 PRMT5O14744 637 aaPredicted RBP13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 SERPIND1P05546 499 aa13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 ZNF26P17031 533 aaPredicted RBP13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 TTPAP49638 278 aa13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 BCL2L1Q07817 233 aa13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 IHHQ14623 411 aa13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 MEP1AQ16819 746 aa13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 C6orf136Q5SQH8 315 aa13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 ANKRD26P1Q6NSI1 321 aa13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 ZCCHC8Q6NZY4 707 aaKnown RBP13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 LARP4Q71RC2 724 aaKnown RBP eCLIP13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 ERMP1Q7Z2K6 904 aa13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 C11orf96Q7Z7L8 435 aa13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 PATL1Q86TB9 770 aaKnown RBP13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 TMEM173Q86WV6 379 aaPredicted RBP13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 LIX1Q8N485 282 aa13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 LMNTD1Q8N9Z9 388 aa13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 TMEM169Q96HH4 297 aa13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 FEM1AQ9BSK4 669 aa13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 TUBB1Q9H4B7 451 aa13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 ZDHHC6Q9H6R6 413 aa13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 IKZF3Q9UKT9 509 aa13.5□□□□□ -0.25
AP001999.1-201ENST00000513405 OR2AG2A6NM03 316 aa13.49□□□□□ -0.25
AP001999.1-201ENST00000513405 PRKD3O94806 890 aa13.49□□□□□ -0.25
AP001999.1-201ENST00000513405 ARHGDIAP52565 204 aa13.49□□□□□ -0.25
AP001999.1-201ENST00000513405 HK2P52789 917 aa13.49□□□□□ -0.25
AP001999.1-201ENST00000513405 TGFBIQ15582 683 aa13.49□□□□□ -0.25
AP001999.1-201ENST00000513405 SNX29P2Q8IUI4 249 aa13.49□□□□□ -0.25
AP001999.1-201ENST00000513405 ARRDC2Q8TBH0 407 aa13.49□□□□□ -0.25
AP001999.1-201ENST00000513405 SOCS4Q8WXH5 440 aa13.49□□□□□ -0.25
AP001999.1-201ENST00000513405 TMBIM1Q969X1 311 aa13.49□□□□□ -0.25
AP001999.1-201ENST00000513405 TRNAU1APQ9NX07 287 aaKnown RBP13.49□□□□□ -0.25
AP001999.1-201ENST00000513405 PCDHB8Q9UN66 801 aa13.49□□□□□ -0.25
AP001999.1-201ENST00000513405 TMA7Q9Y2S6 64 aaKnown RBP13.49□□□□□ -0.25
AP001999.1-201ENST00000513405 C2orf78A6NCI8 922 aa13.49□□□□□ -0.25
AP001999.1-201ENST00000513405 ESRRBO95718 433 aa13.49□□□□□ -0.25
AP001999.1-201ENST00000513405 BMP1P13497 986 aa13.49□□□□□ -0.25
AP001999.1-201ENST00000513405 ADRA1AP35348 466 aa13.49□□□□□ -0.25
AP001999.1-201ENST00000513405 POLR2IP36954 125 aaKnown RBP13.49□□□□□ -0.25
AP001999.1-201ENST00000513405 RECQLP46063 649 aaPredicted RBP13.49□□□□□ -0.25
AP001999.1-201ENST00000513405 PARP15Q460N3 678 aa13.49□□□□□ -0.25
AP001999.1-201ENST00000513405 RFTN2Q52LD8 501 aaPredicted RBP13.49□□□□□ -0.25
AP001999.1-201ENST00000513405 FGD3Q5JSP0 725 aa13.49□□□□□ -0.25
AP001999.1-201ENST00000513405 CLLU1OSQ5K130 101 aa13.49□□□□□ -0.25
AP001999.1-201ENST00000513405 HMBOX1Q6NT76 420 aa13.49□□□□□ -0.25
AP001999.1-201ENST00000513405 GALNT18Q6P9A2 607 aa13.49□□□□□ -0.25
AP001999.1-201ENST00000513405 CYP20A1Q6UW02 462 aa13.49□□□□□ -0.25
AP001999.1-201ENST00000513405 MDGA1Q8NFP4 955 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms