RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 NKAIN2Q5VXU1 208 aa7.11□□□□□ -1.27
USP46-208ENST00000512656 TXNRD3NBQ6F5E7 133 aa7.11□□□□□ -1.27
USP46-208ENST00000512656 CAVIN1Q6NZI2 390 aaKnown RBP7.11□□□□□ -1.27
USP46-208ENST00000512656 ALKBH5Q6P6C2 394 aaKnown RBP7.11□□□□□ -1.27
USP46-208ENST00000512656 WDR74Q6RFH5 385 aaPredicted RBP7.11□□□□□ -1.27
USP46-208ENST00000512656 MARK2Q7KZI7 788 aaKnown RBP7.11□□□□□ -1.27
USP46-208ENST00000512656 SLC9B2Q86UD5 537 aa7.11□□□□□ -1.27
USP46-208ENST00000512656 FAM129CQ86XR2 697 aa7.11□□□□□ -1.27
USP46-208ENST00000512656 CACNA2D3Q8IZS8 1091 aa7.11□□□□□ -1.27
USP46-208ENST00000512656 SFRP1Q8N474 314 aa7.11□□□□□ -1.27
USP46-208ENST00000512656 CCNYQ8ND76 341 aa7.11□□□□□ -1.27
USP46-208ENST00000512656 LPCAT1Q8NF37 534 aa7.11□□□□□ -1.27
USP46-208ENST00000512656 ZNF564Q8TBZ8 553 aaPredicted RBP7.11□□□□□ -1.27
USP46-208ENST00000512656 EPS8L3Q8TE67 593 aaKnown RBP7.11□□□□□ -1.27
USP46-208ENST00000512656 SLC37A2Q8TED4 501 aa7.11□□□□□ -1.27
USP46-208ENST00000512656 PATE1Q8WXA2 126 aa7.11□□□□□ -1.27
USP46-208ENST00000512656 CTNNBL1Q8WYA6 563 aaPredicted RBP7.11□□□□□ -1.27
USP46-208ENST00000512656 ART4Q93070 314 aa7.11□□□□□ -1.27
USP46-208ENST00000512656 NKD1Q969G9 470 aa7.11□□□□□ -1.27
USP46-208ENST00000512656 KIAA1143Q96AT1 154 aaPredicted RBP7.11□□□□□ -1.27
USP46-208ENST00000512656 COX14Q96I36 57 aa7.11□□□□□ -1.27
USP46-208ENST00000512656 CATSPER2Q96P56 530 aa7.11□□□□□ -1.27
USP46-208ENST00000512656 FANCD2OSQ96PS1 177 aa7.11□□□□□ -1.27
USP46-208ENST00000512656 LYSMD1Q96S90 227 aa7.11□□□□□ -1.27
USP46-208ENST00000512656 ZNF670Q9BS34 389 aa7.11□□□□□ -1.27
USP46-208ENST00000512656 ZPBPQ9BS86 351 aa7.11□□□□□ -1.27
USP46-208ENST00000512656 HERPUD2Q9BSE4 406 aa7.11□□□□□ -1.27
USP46-208ENST00000512656 ANP32EQ9BTT0 268 aa7.11□□□□□ -1.27
USP46-208ENST00000512656 EFHD1Q9BUP0 239 aa7.11□□□□□ -1.27
USP46-208ENST00000512656 MLPHQ9BV36 600 aaPredicted RBP7.11□□□□□ -1.27
USP46-208ENST00000512656 RIOK2Q9BVS4 552 aaKnown RBP7.11□□□□□ -1.27
USP46-208ENST00000512656 TDRD1Q9BXT4 1180 aaKnown RBP7.11□□□□□ -1.27
USP46-208ENST00000512656 ADGRE3Q9BY15 652 aa7.11□□□□□ -1.27
USP46-208ENST00000512656 ADNPQ9H2P0 1102 aa7.11□□□□□ -1.27
USP46-208ENST00000512656 FAM83DQ9H4H8 585 aa7.11□□□□□ -1.27
USP46-208ENST00000512656 PCDH9Q9HC56 1237 aa7.11□□□□□ -1.27
USP46-208ENST00000512656 LRRC4CQ9HCJ2 640 aa7.11□□□□□ -1.27
USP46-208ENST00000512656 SARS2Q9NP81 518 aaKnown RBP7.11□□□□□ -1.27
USP46-208ENST00000512656 STARD5Q9NSY2 213 aa7.11□□□□□ -1.27
USP46-208ENST00000512656 PKD2L2Q9NZM6 624 aa7.11□□□□□ -1.27
USP46-208ENST00000512656 CTTNBP2NLQ9P2B4 639 aa7.11□□□□□ -1.27
USP46-208ENST00000512656 PDP2Q9P2J9 529 aa7.11□□□□□ -1.27
USP46-208ENST00000512656 UVRAGQ9P2Y5 699 aa7.11□□□□□ -1.27
USP46-208ENST00000512656 CAPN11Q9UMQ6 739 aa7.11□□□□□ -1.27
USP46-208ENST00000512656 CHKBQ9Y259 395 aa7.11□□□□□ -1.27
USP46-208ENST00000512656 ST14Q9Y5Y6 855 aa7.11□□□□□ -1.27
USP46-208ENST00000512656 TRBV23OR9-2A0A075B6M9 112 aa7.1□□□□□ -1.27
USP46-208ENST00000512656 A0A087X0T9 212 aa7.1□□□□□ -1.27
USP46-208ENST00000512656 C1orf232A0A0U1RR37 186 aa7.1□□□□□ -1.27
USP46-208ENST00000512656 EFCAB7A8K855 629 aa7.1□□□□□ -1.27
USP46-208ENST00000512656 ZNF891A8MT65 544 aaPredicted RBP7.1□□□□□ -1.27
USP46-208ENST00000512656 GPR89AB7ZAQ6 455 aa7.1□□□□□ -1.27
USP46-208ENST00000512656 GOLGA6L19H0YKK7 550 aa7.1□□□□□ -1.27
USP46-208ENST00000512656 RAD1O60671 282 aa7.1□□□□□ -1.27
USP46-208ENST00000512656 PROSCO94903 275 aa7.1□□□□□ -1.27
USP46-208ENST00000512656 CLDN7O95471 211 aa7.1□□□□□ -1.27
USP46-208ENST00000512656 SOD1P00441 154 aa7.1□□□□□ -1.27
USP46-208ENST00000512656 TPM3P06753 285 aa7.1□□□□□ -1.27
USP46-208ENST00000512656 CD48P09326 243 aa7.1□□□□□ -1.27
USP46-208ENST00000512656 H2AFZP0C0S5 128 aa7.1□□□□□ -1.27
USP46-208ENST00000512656 FAM228BP0C875 321 aa7.1□□□□□ -1.27
USP46-208ENST00000512656 GPR89BP0CG08 455 aa7.1□□□□□ -1.27
USP46-208ENST00000512656 UGT1A3P35503 534 aa7.1□□□□□ -1.27
USP46-208ENST00000512656 SPINT3P49223 89 aa7.1□□□□□ -1.27
USP46-208ENST00000512656 ARSEP51690 589 aa7.1□□□□□ -1.27
USP46-208ENST00000512656 UBASH3AP57075 661 aa7.1□□□□□ -1.27
USP46-208ENST00000512656 DSC2Q02487 901 aa7.1□□□□□ -1.27
USP46-208ENST00000512656 HHEXQ03014 270 aa7.1□□□□□ -1.27
USP46-208ENST00000512656 SRSF6Q13247 344 aaKnown RBP7.1□□□□□ -1.27
USP46-208ENST00000512656 IQCB1Q15051 598 aa7.1□□□□□ -1.27
USP46-208ENST00000512656 PTPRRQ15256 657 aa7.1□□□□□ -1.27
USP46-208ENST00000512656 SNAP47Q5SQN1 464 aa7.1□□□□□ -1.27
USP46-208ENST00000512656 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.1□□□□□ -1.27
USP46-208ENST00000512656 NCBP2-AS2Q69YL0 99 aa7.1□□□□□ -1.27
USP46-208ENST00000512656 CCDC70Q6NSX1 233 aa7.1□□□□□ -1.27
USP46-208ENST00000512656 BORAQ6PGQ7 559 aa7.1□□□□□ -1.27
USP46-208ENST00000512656 IYDQ6PHW0 289 aa7.1□□□□□ -1.27
USP46-208ENST00000512656 CEACAM20Q6UY09 585 aa7.1□□□□□ -1.27
USP46-208ENST00000512656 RFLNAQ6ZTI6 216 aa7.1□□□□□ -1.27
USP46-208ENST00000512656 H2AFVQ71UI9 128 aa7.1□□□□□ -1.27
USP46-208ENST00000512656 CHST15Q7LFX5 561 aaPredicted RBP7.1□□□□□ -1.27
USP46-208ENST00000512656 TRIM74Q86UV6 250 aa7.1□□□□□ -1.27
USP46-208ENST00000512656 PLXDC1Q8IUK5 500 aa7.1□□□□□ -1.27
USP46-208ENST00000512656 PHYKPLQ8IUZ5 450 aa7.1□□□□□ -1.27
USP46-208ENST00000512656 CCDC13Q8IYE1 715 aa7.1□□□□□ -1.27
USP46-208ENST00000512656 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.1□□□□□ -1.27
USP46-208ENST00000512656 JPH3Q8WXH2 748 aaPredicted RBP7.1□□□□□ -1.27
USP46-208ENST00000512656 SRPK1Q96SB4 655 aaKnown RBP7.1□□□□□ -1.27
USP46-208ENST00000512656 AGAP2Q99490 1192 aa7.1□□□□□ -1.27
USP46-208ENST00000512656 SLC25A18Q9H1K4 315 aa7.1□□□□□ -1.27
USP46-208ENST00000512656 CARD9Q9H257 536 aa7.1□□□□□ -1.27
USP46-208ENST00000512656 TRIT1Q9H3H1 467 aaKnown RBP7.1□□□□□ -1.27
USP46-208ENST00000512656 GEMIN8Q9NWZ8 242 aaKnown RBP7.1□□□□□ -1.27
USP46-208ENST00000512656 IL17BQ9UHF5 180 aa7.1□□□□□ -1.27
USP46-208ENST00000512656 TUBD1Q9UJT1 453 aa7.1□□□□□ -1.27
USP46-208ENST00000512656 DCTN4Q9UJW0 460 aa7.1□□□□□ -1.27
USP46-208ENST00000512656 SLC5A6Q9Y289 635 aa7.1□□□□□ -1.27
USP46-208ENST00000512656 PLEKHM1Q9Y4G2 1056 aa7.1□□□□□ -1.27
USP46-208ENST00000512656 B3GALT1Q9Y5Z6 326 aa7.1□□□□□ -1.27
USP46-208ENST00000512656 SCN8AQ9UQD0 1980 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms