RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 HDAC7Q8WUI4 952 aa6.6□□□□□ -1.35
USP53-206ENST00000510737 DUX5Q96PT3 197 aa6.6□□□□□ -1.35
USP53-206ENST00000510737 RPS6KC1Q96S38 1066 aa6.6□□□□□ -1.35
USP53-206ENST00000510737 MRPL9Q9BYD2 267 aaKnown RBP6.6□□□□□ -1.35
USP53-206ENST00000510737 TBC1D13Q9NVG8 400 aa6.6□□□□□ -1.35
USP53-206ENST00000510737 RCE1Q9Y256 329 aa6.6□□□□□ -1.35
USP53-206ENST00000510737 DOCK8Q8NF50 2099 aa6.59□□□□□ -1.35
USP53-206ENST00000510737 FRMPD4Q14CM0 1322 aa6.59□□□□□ -1.35
USP53-206ENST00000510737 MYO18BQ8IUG5 2567 aa6.59□□□□□ -1.35
USP53-206ENST00000510737 IGHV4-28A0A0C4DH34 117 aa6.59□□□□□ -1.35
USP53-206ENST00000510737 CDX4O14627 284 aaPredicted RBP6.59□□□□□ -1.35
USP53-206ENST00000510737 BUB3O43684 328 aa6.59□□□□□ -1.35
USP53-206ENST00000510737 DHX16O60231 1041 aaKnown RBP6.59□□□□□ -1.35
USP53-206ENST00000510737 DDHD2O94830 711 aa6.59□□□□□ -1.35
USP53-206ENST00000510737 ZFYP08048 801 aaPredicted RBP6.59□□□□□ -1.35
USP53-206ENST00000510737 MYZAPP0CAP1 466 aa6.59□□□□□ -1.35
USP53-206ENST00000510737 LYL1P12980 280 aa6.59□□□□□ -1.35
USP53-206ENST00000510737 PRKCHP24723 683 aa6.59□□□□□ -1.35
USP53-206ENST00000510737 AK2P54819 239 aa6.59□□□□□ -1.35
USP53-206ENST00000510737 KRTAP10-12P60413 245 aa6.59□□□□□ -1.35
USP53-206ENST00000510737 CDK18Q07002 472 aa6.59□□□□□ -1.35
USP53-206ENST00000510737 MRGPRG-AS1Q2M3A8 158 aa6.59□□□□□ -1.35
USP53-206ENST00000510737 MTSS1LQ765P7 747 aa6.59□□□□□ -1.35
USP53-206ENST00000510737 CACNA2D4Q7Z3S7 1137 aa6.59□□□□□ -1.35
USP53-206ENST00000510737 WDR5BQ86VZ2 330 aa6.59□□□□□ -1.35
USP53-206ENST00000510737 SPEM1Q8N4L4 309 aa6.59□□□□□ -1.35
USP53-206ENST00000510737 DEFB124Q8NES8 71 aa6.59□□□□□ -1.35
USP53-206ENST00000510737 STYXQ8WUJ0 223 aa6.59□□□□□ -1.35
USP53-206ENST00000510737 FAM3CQ92520 227 aa6.59□□□□□ -1.35
USP53-206ENST00000510737 MUL1Q969V5 352 aa6.59□□□□□ -1.35
USP53-206ENST00000510737 EDEM2Q9BV94 578 aa6.59□□□□□ -1.35
USP53-206ENST00000510737 PLEKHA4Q9H4M7 779 aa6.59□□□□□ -1.35
USP53-206ENST00000510737 DONSONQ9NYP3 566 aa6.59□□□□□ -1.35
USP53-206ENST00000510737 TICRRQ7Z2Z1 1910 aa6.58□□□□□ -1.36
USP53-206ENST00000510737 ANKRD17O75179 2603 aaKnown RBP6.58□□□□□ -1.36
USP53-206ENST00000510737 NPIPB13A6NJU9 1138 aa6.58□□□□□ -1.36
USP53-206ENST00000510737 NPIPB5A8MRT5 1133 aa6.58□□□□□ -1.36
USP53-206ENST00000510737 NPIPB4C9JG80 1138 aa6.58□□□□□ -1.36
USP53-206ENST00000510737 TNFRSF6BO95407 300 aa6.58□□□□□ -1.36
USP53-206ENST00000510737 VTNP04004 478 aa6.58□□□□□ -1.36
USP53-206ENST00000510737 FCGR2AP12318 317 aa6.58□□□□□ -1.36
USP53-206ENST00000510737 HOXA6P31267 233 aa6.58□□□□□ -1.36
USP53-206ENST00000510737 MYBPC2Q14324 1141 aa6.58□□□□□ -1.36
USP53-206ENST00000510737 TANGO2Q6ICL3 276 aa6.58□□□□□ -1.36
USP53-206ENST00000510737 PLPPR4Q7Z2D5 763 aa6.58□□□□□ -1.36
USP53-206ENST00000510737 CHCHD4Q8N4Q1 142 aa6.58□□□□□ -1.36
USP53-206ENST00000510737 TMEM163Q8TC26 289 aa6.58□□□□□ -1.36
USP53-206ENST00000510737 WBP1Q96G27 269 aa6.58□□□□□ -1.36
USP53-206ENST00000510737 SLC25A33Q9BSK2 321 aa6.58□□□□□ -1.36
USP53-206ENST00000510737 PDE11AQ9HCR9 933 aa6.58□□□□□ -1.36
USP53-206ENST00000510737 ECHDC1Q9NTX5 307 aa6.58□□□□□ -1.36
USP53-206ENST00000510737 LIN7CQ9NUP9 197 aaKnown RBP6.58□□□□□ -1.36
USP53-206ENST00000510737 AGO1Q9UL18 857 aaKnown RBP6.58□□□□□ -1.36
USP53-206ENST00000510737 PCDHGA5Q9Y5G8 931 aa6.58□□□□□ -1.36
USP53-206ENST00000510737 RALGAPA1Q6GYQ0 2036 aa6.58□□□□□ -1.36
USP53-206ENST00000510737 CFAP46Q8IYW2 2715 aa6.57□□□□□ -1.36
USP53-206ENST00000510737 COL12A1Q99715 3063 aa6.57□□□□□ -1.36
USP53-206ENST00000510737 SPAARA0A1B0GVQ0 90 aa6.57□□□□□ -1.36
USP53-206ENST00000510737 LNP1A1A4G5 178 aa6.57□□□□□ -1.36
USP53-206ENST00000510737 J3QKU1 62 aa6.57□□□□□ -1.36
USP53-206ENST00000510737 ZBTB5O15062 677 aa6.57□□□□□ -1.36
USP53-206ENST00000510737 ECI2O75521 394 aa6.57□□□□□ -1.36
USP53-206ENST00000510737 SP1P08047 785 aa6.57□□□□□ -1.36
USP53-206ENST00000510737 CYP21A2P08686 494 aa6.57□□□□□ -1.36
USP53-206ENST00000510737 F7P08709 466 aaPredicted RBP6.57□□□□□ -1.36
USP53-206ENST00000510737 ABCB4P21439 1286 aa6.57□□□□□ -1.36
USP53-206ENST00000510737 POU3F1Q03052 451 aaPredicted RBP6.57□□□□□ -1.36
USP53-206ENST00000510737 ASPRV1Q53RT3 343 aa6.57□□□□□ -1.36
USP53-206ENST00000510737 RETSATQ6NUM9 610 aa6.57□□□□□ -1.36
USP53-206ENST00000510737 Q6ZS52 159 aa6.57□□□□□ -1.36
USP53-206ENST00000510737 RNF168Q8IYW5 571 aaPredicted RBP6.57□□□□□ -1.36
USP53-206ENST00000510737 ZNF843Q8N446 348 aa6.57□□□□□ -1.36
USP53-206ENST00000510737 TEX45Q8NA69 505 aa6.57□□□□□ -1.36
USP53-206ENST00000510737 CCDC138Q96M89 665 aa6.57□□□□□ -1.36
USP53-206ENST00000510737 GFM1Q96RP9 751 aaKnown RBP6.57□□□□□ -1.36
USP53-206ENST00000510737 AZI2Q9H6S1 392 aa6.57□□□□□ -1.36
USP53-206ENST00000510737 SEL1LQ9UBV2 794 aa6.57□□□□□ -1.36
USP53-206ENST00000510737 SLC25A13Q9UJS0 675 aa6.57□□□□□ -1.36
USP53-206ENST00000510737 SRPRBQ9Y5M8 271 aaKnown RBP6.57□□□□□ -1.36
USP53-206ENST00000510737 ZNF462Q96JM2 2506 aa6.57□□□□□ -1.36
USP53-206ENST00000510737 DOCK5Q9H7D0 1870 aa6.57□□□□□ -1.36
USP53-206ENST00000510737 TEP1Q99973 2627 aaKnown RBP6.56□□□□□ -1.36
USP53-206ENST00000510737 BMPR1BO00238 502 aa6.56□□□□□ -1.36
USP53-206ENST00000510737 CSDE1O75534 798 aaKnown RBP6.56□□□□□ -1.36
USP53-206ENST00000510737 KRT38O76015 456 aa6.56□□□□□ -1.36
USP53-206ENST00000510737 DDAH2O95865 285 aa6.56□□□□□ -1.36
USP53-206ENST00000510737 CGAP01215 116 aa6.56□□□□□ -1.36
USP53-206ENST00000510737 NLRP11P59045 1033 aaKnown RBP6.56□□□□□ -1.36
USP53-206ENST00000510737 ALX1Q15699 326 aa6.56□□□□□ -1.36
USP53-206ENST00000510737 MON1BQ7L1V2 547 aa6.56□□□□□ -1.36
USP53-206ENST00000510737 ITPRIPQ8IWB1 547 aa6.56□□□□□ -1.36
USP53-206ENST00000510737 SPATA20Q8TB22 786 aa6.56□□□□□ -1.36
USP53-206ENST00000510737 FAR1Q8WVX9 515 aa6.56□□□□□ -1.36
USP53-206ENST00000510737 DNASE1L2Q92874 299 aa6.56□□□□□ -1.36
USP53-206ENST00000510737 B3GALT6Q96L58 329 aa6.56□□□□□ -1.36
USP53-206ENST00000510737 FRG2BQ96QU4 278 aa6.56□□□□□ -1.36
USP53-206ENST00000510737 HERC2P3Q9BVR0 1158 aa6.56□□□□□ -1.36
USP53-206ENST00000510737 TCF7L2Q9NQB0 619 aa6.56□□□□□ -1.36
USP53-206ENST00000510737 MARCH5Q9NX47 278 aa6.56□□□□□ -1.36
USP53-206ENST00000510737 STK39Q9UEW8 545 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms