RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 PSKH1P11801 424 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 KCTD19Q17RG1 926 aaPredicted RBP8.29□□□□□ -1.08
HTT-208ENST00000510626 C1orf189Q5VU69 101 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 LPGAT1Q92604 370 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 SLC6A16Q9GZN6 736 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 DPAGT1Q9H3H5 408 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 SIAEQ9HAT2 523 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 MYNNQ9NPC7 610 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 POLR3BQ9NW08 1133 aaPredicted RBP8.29□□□□□ -1.08
HTT-208ENST00000510626 TRAPPC13A5PLN9 417 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 NARSO43776 548 aaKnown RBP8.29□□□□□ -1.08
HTT-208ENST00000510626 ZNF33AQ06730 810 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 SMU1Q2TAY7 513 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 SERPINA13PQ6UXR4 307 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 MARK4Q96L34 752 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 C12orf65Q9H3J6 166 aaKnown RBP8.29□□□□□ -1.08
HTT-208ENST00000510626 ARMC1Q9NVT9 282 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 MAU2Q9Y6X3 613 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 PGDP52209 483 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 CYP4F8P98187 520 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 BCL2L1Q07817 233 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 WSCD2Q2TBF2 565 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 CRTC2Q53ET0 693 aaPredicted RBP8.29□□□□□ -1.08
HTT-208ENST00000510626 TRNT1Q96Q11 434 aaKnown RBP8.29□□□□□ -1.08
HTT-208ENST00000510626 TM9SF2Q99805 663 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 SNTG2Q9NY99 539 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 GTF2A2P52657 109 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 C15orf52Q6ZUT6 534 aaKnown RBP8.28□□□□□ -1.08
HTT-208ENST00000510626 UTS2BQ765I0 119 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 DNAJC19Q96DA6 116 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 DCSTAMPQ9H295 470 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 DGKBQ9Y6T7 804 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 ACSBG2Q5FVE4 666 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 KDM1BQ8NB78 822 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 REPS2Q8NFH8 660 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 CEP76Q8TAP6 659 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 COPS4Q9BT78 406 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 TTLL2Q9BWV7 592 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 ITPAQ9BY32 194 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 KMOO15229 486 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 PEX11AO75192 247 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 GMPRP36959 345 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 NRIP1P48552 1158 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 DCLRE1AQ6PJP8 1040 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 RANBP3LQ86VV4 465 aaPredicted RBP8.28□□□□□ -1.08
HTT-208ENST00000510626 TNS4Q8IZW8 715 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 CARNMT1Q8N4J0 409 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 NPAS2Q99743 824 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 REXO2Q9Y3B8 237 aaKnown RBP8.28□□□□□ -1.08
HTT-208ENST00000510626 IL7P13232 177 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 CYCSP99999 105 aaKnown RBP8.28□□□□□ -1.08
HTT-208ENST00000510626 NKX1-1Q15270 411 aaPredicted RBP8.28□□□□□ -1.08
HTT-208ENST00000510626 ASTE1Q2TB18 679 aaPredicted RBP8.28□□□□□ -1.08
HTT-208ENST00000510626 FAM129BQ96TA1 746 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 POFUT2Q9Y2G5 429 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 ASTN1O14525 1302 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 CDKN2BP42772 138 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 HERVK_113P63132 956 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 SLC25A52Q3SY17 297 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 KLHL26Q53HC5 615 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 DAW1Q8N136 415 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 TCEAL4Q96EI5 215 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 NSMCE3Q96MG7 304 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 PFDN5Q99471 154 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 CIB1Q99828 191 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 ERVK-6Q9BXR3 956 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 FBXO9Q9UK97 447 aaPredicted RBP8.28□□□□□ -1.08
HTT-208ENST00000510626 NID2Q14112 1375 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 TSTD3H0UI37 97 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 AGPSO00116 658 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 SLC13A2Q13183 592 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 STARD3Q14849 445 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 DLG2Q15700 870 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 CAPN13Q6MZZ7 669 aaPredicted RBP8.28□□□□□ -1.08
HTT-208ENST00000510626 MRPS33Q9Y291 106 aaKnown RBP8.28□□□□□ -1.08
HTT-208ENST00000510626 APLP1P51693 650 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 PTPN5P54829 565 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 NADK2Q4G0N4 442 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 STOML3Q8TAV4 291 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 DUSP16Q9BY84 665 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 TRIM36Q9NQ86 728 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 ACSL5Q9ULC5 683 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 ASB4Q9Y574 426 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 ACSL4O60488 711 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 FCER2P06734 321 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 MAGEA3P43357 314 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 PLPPR4Q7Z2D5 763 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 SLC38A4Q969I6 547 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 DNMT3LQ9UJW3 386 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 HLA-DQA2P01906 255 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 RB1P06400 928 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 C8GP07360 202 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 EIF2S3LQ2VIR3 472 aaKnown RBP8.28□□□□□ -1.08
HTT-208ENST00000510626 SH3PXD2AQ5TCZ1 1133 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 ATCAYQ86WG3 371 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 MRM3Q9HC36 420 aaKnown RBP8.28□□□□□ -1.08
HTT-208ENST00000510626 MARK1Q9P0L2 795 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 SLC17A7Q9P2U7 560 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 C2orf71A6NGG8 1288 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 STK16O75716 305 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms