RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 HID1Q8IV36 788 aa14.72□□□□□ -0.05
USP38-202ENST00000510377 HS3ST5Q8IZT8 346 aa14.72□□□□□ -0.05
USP38-202ENST00000510377 CGREF1Q99674 301 aa14.72□□□□□ -0.05
USP38-202ENST00000510377 NPLQ9BXD5 320 aaPredicted RBP14.72□□□□□ -0.05
USP38-202ENST00000510377 RNF208Q9H0X6 261 aa14.72□□□□□ -0.05
USP38-202ENST00000510377 MFSD1Q9H3U5 465 aa14.72□□□□□ -0.05
USP38-202ENST00000510377 ASB8Q9H765 288 aa14.72□□□□□ -0.05
USP38-202ENST00000510377 RPF2Q9H7B2 306 aaKnown RBP14.72□□□□□ -0.05
USP38-202ENST00000510377 TMEM161AQ9NX61 479 aa14.72□□□□□ -0.05
USP38-202ENST00000510377 ARL15Q9NXU5 204 aa14.72□□□□□ -0.05
USP38-202ENST00000510377 SH3BP4Q9P0V3 963 aa14.72□□□□□ -0.05
USP38-202ENST00000510377 TMEM181Q9P2C4 612 aa14.72□□□□□ -0.05
USP38-202ENST00000510377 PGAP2Q9UHJ9 254 aa14.72□□□□□ -0.05
USP38-202ENST00000510377 NBNO60934 754 aa14.72□□□□□ -0.05
USP38-202ENST00000510377 CLPXO76031 633 aa14.72□□□□□ -0.05
USP38-202ENST00000510377 ITGALP20701 1170 aa14.72□□□□□ -0.05
USP38-202ENST00000510377 SOAT1P35610 550 aa14.72□□□□□ -0.05
USP38-202ENST00000510377 SEMG2Q02383 582 aa14.72□□□□□ -0.05
USP38-202ENST00000510377 HSPA14Q0VDF9 509 aa14.72□□□□□ -0.05
USP38-202ENST00000510377 NFATC3Q12968 1075 aa14.72□□□□□ -0.05
USP38-202ENST00000510377 HMBOX1Q6NT76 420 aa14.72□□□□□ -0.05
USP38-202ENST00000510377 LRRC49Q8IUZ0 686 aa14.72□□□□□ -0.05
USP38-202ENST00000510377 RBM12BQ8IXT5 1001 aaKnown RBP14.72□□□□□ -0.05
USP38-202ENST00000510377 SVOPQ8N4V2 548 aa14.72□□□□□ -0.05
USP38-202ENST00000510377 CDKN2AIPNLQ96HQ2 116 aa14.72□□□□□ -0.05
USP38-202ENST00000510377 PPP3R2Q96LZ3 170 aa14.72□□□□□ -0.05
USP38-202ENST00000510377 BIRC8Q96P09 236 aa14.72□□□□□ -0.05
USP38-202ENST00000510377 REEP1Q9H902 201 aa14.72□□□□□ -0.05
USP38-202ENST00000510377 SLAMF8Q9P0V8 285 aa14.72□□□□□ -0.05
USP38-202ENST00000510377 TCRBV3S1A0A5B6 114 aa14.72□□□□□ -0.05
USP38-202ENST00000510377 RHOQP17081 205 aa14.72□□□□□ -0.05
USP38-202ENST00000510377 GPR15P49685 360 aa14.72□□□□□ -0.05
USP38-202ENST00000510377 ERVK-8P63133 956 aa14.72□□□□□ -0.05
USP38-202ENST00000510377 SP3Q02447 781 aa14.72□□□□□ -0.05
USP38-202ENST00000510377 TAF10Q12962 218 aa14.72□□□□□ -0.05
USP38-202ENST00000510377 ZNF773Q6PK81 442 aa14.72□□□□□ -0.05
USP38-202ENST00000510377 CYP20A1Q6UW02 462 aa14.72□□□□□ -0.05
USP38-202ENST00000510377 PHACTR4Q8IZ21 702 aa14.72□□□□□ -0.05
USP38-202ENST00000510377 AURKBQ96GD4 344 aaPredicted RBP14.72□□□□□ -0.05
USP38-202ENST00000510377 SPASTQ9UBP0 616 aa14.72□□□□□ -0.05
USP38-202ENST00000510377 TBX1O43435 398 aa14.71□□□□□ -0.05
USP38-202ENST00000510377 AP1G1O43747 822 aa14.71□□□□□ -0.05
USP38-202ENST00000510377 RASAL1O95294 804 aa14.71□□□□□ -0.05
USP38-202ENST00000510377 NDST3O95803 873 aa14.71□□□□□ -0.05
USP38-202ENST00000510377 S1PR4O95977 384 aa14.71□□□□□ -0.05
USP38-202ENST00000510377 ZNF7P17097 686 aaPredicted RBP14.71□□□□□ -0.05
USP38-202ENST00000510377 PRDX3P30048 256 aaKnown RBP14.71□□□□□ -0.05
USP38-202ENST00000510377 GDF5P43026 501 aa14.71□□□□□ -0.05
USP38-202ENST00000510377 TTPAP49638 278 aa14.71□□□□□ -0.05
USP38-202ENST00000510377 CDH18Q13634 790 aa14.71□□□□□ -0.05
USP38-202ENST00000510377 PDCD4Q53EL6 469 aaKnown RBP14.71□□□□□ -0.05
USP38-202ENST00000510377 TAPT1Q6NXT6 567 aa14.71□□□□□ -0.05
USP38-202ENST00000510377 MON1AQ86VX9 555 aa14.71□□□□□ -0.05
USP38-202ENST00000510377 DENND1CQ8IV53 801 aa14.71□□□□□ -0.05
USP38-202ENST00000510377 FAM126AQ9BYI3 521 aaPredicted RBP14.71□□□□□ -0.05
USP38-202ENST00000510377 MIR1-1HGQ9H1L0 117 aa14.71□□□□□ -0.05
USP38-202ENST00000510377 SYNDIG1LA6NDD5 238 aa14.71□□□□□ -0.05
USP38-202ENST00000510377 SOCS7O14512 581 aa14.71□□□□□ -0.05
USP38-202ENST00000510377 MYF6P23409 242 aa14.71□□□□□ -0.05
USP38-202ENST00000510377 TOP3AQ13472 1001 aaPredicted RBP14.71□□□□□ -0.05
USP38-202ENST00000510377 INTS11Q5TA45 600 aaKnown RBP14.71□□□□□ -0.05
USP38-202ENST00000510377 MFSD6LQ8IWD5 586 aa14.71□□□□□ -0.05
USP38-202ENST00000510377 RBM4BQ9BQ04 359 aaKnown RBP14.71□□□□□ -0.05
USP38-202ENST00000510377 RBM4Q9BWF3 364 aaKnown RBP14.71□□□□□ -0.05
USP38-202ENST00000510377 WDR12Q9GZL7 423 aaKnown RBP14.71□□□□□ -0.05
USP38-202ENST00000510377 MTRRQ9UBK8 725 aa14.71□□□□□ -0.05
USP38-202ENST00000510377 ZNF490Q9ULM2 529 aaPredicted RBP14.71□□□□□ -0.05
USP38-202ENST00000510377 GOLGB1Q14789 3259 aaKnown RBP14.71□□□□□ -0.05
USP38-202ENST00000510377 ATAD5Q96QE3 1844 aa14.71□□□□□ -0.05
USP38-202ENST00000510377 A0A1W2PQ67 120 aa14.71□□□□□ -0.06
USP38-202ENST00000510377 ARVCFO00192 962 aa14.71□□□□□ -0.06
USP38-202ENST00000510377 CXCR6O00574 342 aa14.71□□□□□ -0.06
USP38-202ENST00000510377 OTCP00480 354 aa14.71□□□□□ -0.06
USP38-202ENST00000510377 SERPINA1P01009 418 aa14.71□□□□□ -0.06
USP38-202ENST00000510377 KCNE1P15382 129 aa14.71□□□□□ -0.06
USP38-202ENST00000510377 PRIM2P49643 509 aa14.71□□□□□ -0.06
USP38-202ENST00000510377 EEFSECP57772 596 aaKnown RBP14.71□□□□□ -0.06
USP38-202ENST00000510377 TTLL9Q3SXZ7 439 aa14.71□□□□□ -0.06
USP38-202ENST00000510377 PABPC1LQ4VXU2 614 aaKnown RBP14.71□□□□□ -0.06
USP38-202ENST00000510377 P2RY8Q86VZ1 359 aa14.71□□□□□ -0.06
USP38-202ENST00000510377 ADGRG5Q8IZF4 528 aa14.71□□□□□ -0.06
USP38-202ENST00000510377 EEF1AKMT1Q8WVE0 214 aa14.71□□□□□ -0.06
USP38-202ENST00000510377 TUBA8Q9NY65 449 aaPredicted RBP14.71□□□□□ -0.06
USP38-202ENST00000510377 FAM234BA2RU67 622 aa14.7□□□□□ -0.06
USP38-202ENST00000510377 CDH1P12830 882 aa14.7□□□□□ -0.06
USP38-202ENST00000510377 CD1DP15813 335 aa14.7□□□□□ -0.06
USP38-202ENST00000510377 LEPRP48357 1165 aaKnown RBP14.7□□□□□ -0.06
USP38-202ENST00000510377 KCNC1P48547 511 aa14.7□□□□□ -0.06
USP38-202ENST00000510377 VBP1P61758 197 aa14.7□□□□□ -0.06
USP38-202ENST00000510377 FKBP1BP68106 108 aa14.7□□□□□ -0.06
USP38-202ENST00000510377 KCNAB2Q13303 367 aa14.7□□□□□ -0.06
USP38-202ENST00000510377 APOFQ13790 326 aa14.7□□□□□ -0.06
USP38-202ENST00000510377 PLA2G4EQ3MJ16 856 aa14.7□□□□□ -0.06
USP38-202ENST00000510377 TMEM236Q5W0B7 351 aa14.7□□□□□ -0.06
USP38-202ENST00000510377 TXNDC11Q6PKC3 985 aa14.7□□□□□ -0.06
USP38-202ENST00000510377 PAQR9Q6ZVX9 377 aa14.7□□□□□ -0.06
USP38-202ENST00000510377 SLC13A3Q8WWT9 602 aa14.7□□□□□ -0.06
USP38-202ENST00000510377 TSEN34Q9BSV6 310 aaKnown RBP14.7□□□□□ -0.06
USP38-202ENST00000510377 EPS8L2Q9H6S3 715 aa14.7□□□□□ -0.06
USP38-202ENST00000510377 GIN1Q9NXP7 522 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms