RNA–Protein interactions for RNA: ENST00000509368.6

PDE4D-218, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-218ENST00000509368 MS4A10Q96PG2 267 aa2.24□□□□□ -2.05
PDE4D-218ENST00000509368 CDRT15Q96T59 188 aa2.24□□□□□ -2.05
PDE4D-218ENST00000509368 GAD1Q99259 594 aa2.24□□□□□ -2.05
PDE4D-218ENST00000509368 SEPHS2Q99611 448 aa2.24□□□□□ -2.05
PDE4D-218ENST00000509368 C1QTNF5Q9BXJ0 243 aa2.24□□□□□ -2.05
PDE4D-218ENST00000509368 ABCG8Q9H221 673 aa2.24□□□□□ -2.05
PDE4D-218ENST00000509368 EPB41L5Q9HCM4 733 aa2.24□□□□□ -2.05
PDE4D-218ENST00000509368 PAG1Q9NWQ8 432 aa2.24□□□□□ -2.05
PDE4D-218ENST00000509368 MTMR10Q9NXD2 777 aa2.24□□□□□ -2.05
PDE4D-218ENST00000509368 ACTR3BQ9P1U1 418 aa2.24□□□□□ -2.05
PDE4D-218ENST00000509368 LARSQ9P2J5 1176 aaKnown RBP2.24□□□□□ -2.05
PDE4D-218ENST00000509368 NDRG3Q9UGV2 375 aa2.24□□□□□ -2.05
PDE4D-218ENST00000509368 ITGA11Q9UKX5 1188 aa2.24□□□□□ -2.05
PDE4D-218ENST00000509368 MAP3K2Q9Y2U5 619 aa2.24□□□□□ -2.05
PDE4D-218ENST00000509368 HEMK1Q9Y5R4 338 aaPredicted RBP2.24□□□□□ -2.05
PDE4D-218ENST00000509368 A3GALT2U3KPV4 340 aa2.24□□□□□ -2.05
PDE4D-218ENST00000509368 MAST3O60307 1309 aa2.24□□□□□ -2.05
PDE4D-218ENST00000509368 NHSQ6T4R5 1651 aa2.24□□□□□ -2.05
PDE4D-218ENST00000509368 KIF13BQ9NQT8 1826 aa2.24□□□□□ -2.05
PDE4D-218ENST00000509368 ABCC11Q96J66 1382 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 PAPPAQ13219 1627 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 KRT87PA6NCN2 255 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 YDJCA8MPS7 323 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 KLRF2D3W0D1 207 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 UBE2Q2LH0YL09 131 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 CLDN4O14493 209 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 SOCS5O75159 536 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 TADA2AO75478 443 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 NCR1O76036 304 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 PENKP01210 267 aaPredicted RBP2.23□□□□□ -2.05
PDE4D-218ENST00000509368 ERBB2P04626 1255 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 HEXBP07686 556 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 PDGFRAP16234 1089 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 ITGAXP20702 1163 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 CCND2P30279 289 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 DEKP35659 375 aaKnown RBP2.23□□□□□ -2.05
PDE4D-218ENST00000509368 SUOXP51687 545 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 CASP9P55211 416 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 ST8SIA6P61647 398 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 ECT2LQ008S8 904 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 ZBTB16Q05516 673 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 LRRC74AQ0VAA2 488 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 TMED1Q13445 227 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 SGO1Q5FBB7 561 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.23□□□□□ -2.05
PDE4D-218ENST00000509368 METTL2BQ6P1Q9 378 aaKnown RBP2.23□□□□□ -2.05
PDE4D-218ENST00000509368 TMEM65Q6PI78 240 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 PAPD4Q6PIY7 484 aaKnown RBP2.23□□□□□ -2.05
PDE4D-218ENST00000509368 RANBP10Q6VN20 620 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 TRIM72Q6ZMU5 477 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 RNF207Q6ZRF8 634 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 OTUD6AQ7L8S5 288 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 SPATA21Q7Z572 469 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 PATL1Q86TB9 770 aaKnown RBP2.23□□□□□ -2.05
PDE4D-218ENST00000509368 DENND6AQ8IWF6 608 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 CNTN4Q8IWV2 1026 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 PEX5LQ8IYB4 626 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 CADM3Q8N126 398 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 IL17DQ8TAD2 202 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 KIAA1524Q8TCG1 905 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 ZNF398Q8TD17 642 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 NEU4Q8WWR8 484 aaPredicted RBP2.23□□□□□ -2.05
PDE4D-218ENST00000509368 ZNF606Q8WXB4 792 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 EXTL1Q92935 676 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 PABPC5Q96DU9 382 aaKnown RBP2.23□□□□□ -2.05
PDE4D-218ENST00000509368 C14orf79Q96F83 325 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 METTL2AQ96IZ6 378 aaKnown RBP2.23□□□□□ -2.05
PDE4D-218ENST00000509368 TEPSINQ96N21 525 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 MYADMQ96S97 322 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 KLC2Q9H0B6 622 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 RBM28Q9NW13 759 aaKnown RBP2.23□□□□□ -2.05
PDE4D-218ENST00000509368 ARMCX3Q9UH62 379 aaPredicted RBP2.23□□□□□ -2.05
PDE4D-218ENST00000509368 HACL1Q9UJ83 578 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 DBNLQ9UJU6 430 aaKnown RBP2.23□□□□□ -2.05
PDE4D-218ENST00000509368 LSM4Q9Y4Z0 139 aaKnown RBP2.23□□□□□ -2.05
PDE4D-218ENST00000509368 DDX49Q9Y6V7 483 aaKnown RBP2.23□□□□□ -2.05
PDE4D-218ENST00000509368 LMO7Q8WWI1 1683 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 TMEM8BA6NDV4 472 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 DVL1O14640 695 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 PTGESO14684 152 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 WNT9BO14905 357 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 NDUFS4O43181 175 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 MSI1O43347 362 aaKnown RBP2.23□□□□□ -2.05
PDE4D-218ENST00000509368 TLR2O60603 784 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 ZNF623O75123 536 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 SPDEFO95238 335 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 NDUFA10O95299 355 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 C9P02748 559 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 OPN1MWP04001 364 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 ITGB3P05106 788 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 OPN1MW2P0DN77 364 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 OPN1MW3P0DN78 364 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 UROSP10746 265 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 ETFAP13804 333 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 ENO3P13929 434 aaPredicted RBP2.23□□□□□ -2.05
PDE4D-218ENST00000509368 GRIA3P42263 894 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 HMGA2P52926 109 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 COPB1P53618 953 aaKnown RBP2.23□□□□□ -2.05
PDE4D-218ENST00000509368 PLP2Q04941 152 aa2.23□□□□□ -2.05
PDE4D-218ENST00000509368 PPATQ06203 517 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms