RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 TPSAB1Q15661 275 aa7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 DBN1Q16643 649 aa7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 C14orf28Q4W4Y0 310 aa7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 RNASEH2BQ5TBB1 312 aaKnown RBP7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 TMPRSS7Q7RTY8 843 aa7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 PHYKPLQ8IUZ5 450 aa7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 SDR16C5Q8N3Y7 309 aa7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 FSTL5Q8N475 847 aaPredicted RBP7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 NAT8LQ8N9F0 302 aa7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 BRSK1Q8TDC3 778 aa7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 SKA1Q96BD8 255 aa7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 PBKQ96KB5 322 aa7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 CNTNAP3BQ96NU0 1288 aa7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 CDC6Q99741 560 aa7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 NAPGQ99747 312 aaPredicted RBP7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 ZSCAN5AQ9BUG6 496 aa7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 CNTNAP3Q9BZ76 1288 aa7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 SLC32A1Q9H598 525 aa7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 TREX1Q9NSU2 369 aa7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 NLE1Q9NVX2 485 aaPredicted RBP7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 TRNAU1APQ9NX07 287 aaKnown RBP7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 IL1RAPL1Q9NZN1 696 aa7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 HACD3Q9P035 362 aa7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 TMEM9Q9P0T7 183 aa7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 PAK5Q9P286 719 aa7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 MOSPD1Q9UJG1 213 aa7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 GPR34Q9UPC5 381 aa7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 DRG1Q9Y295 367 aaKnown RBP7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 WDR37Q9Y2I8 494 aa7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 ZKSCAN5Q9Y2L8 839 aa7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 AAR2Q9Y312 384 aaKnown RBP7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 PCDHGA1Q9Y5H4 931 aa7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 NBEAQ8NFP9 2946 aa7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 TAF4O00268 1085 aa7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 NTN3O00634 580 aaPredicted RBP7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 PPM1DO15297 605 aa7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 OPA1O60313 960 aa7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 CPNE3O75131 537 aaKnown RBP7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 STK10O94804 968 aaKnown RBP7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 ECEL1O95672 775 aa7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 TNFP01375 233 aa7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 KRT14P02533 472 aa7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 APRTP07741 180 aa7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 ANXA6P08133 673 aa7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 PCSK2P16519 638 aa7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 LPOP22079 712 aaPredicted RBP7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 MGAT1P26572 445 aa7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 HTR1BP28222 390 aa7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 NMBRP28336 390 aa7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 FDFT1P37268 417 aa7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 ACTR1BP42025 376 aa7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 FNTAP49354 379 aa7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 ACTR1AP61163 376 aa7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 BASP1P80723 227 aaKnown RBP7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 C2orf54Q08AI8 447 aa7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 PTK6Q13882 451 aa7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 ELOCQ15369 112 aa7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 NR0B2Q15466 257 aa7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 HIF1AQ16665 826 aa7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 INAVAQ3KP66 663 aa7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 C4orf17Q53FE4 359 aa7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 UBAP2Q5T6F2 1119 aaKnown RBP7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 TSTD2Q5T7W7 516 aa7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 PDPK2PQ6A1A2 396 aa7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 CCDC137Q6PK04 289 aaKnown RBP7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 CES3Q6UWW8 571 aa7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 CCNI2Q6ZMN8 369 aaPredicted RBP7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 DET1Q7L5Y6 550 aa7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 SPRED1Q7Z699 444 aa7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 TAF8Q7Z7C8 310 aa7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 LDB1Q86U70 411 aaPredicted RBP7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 GALNT13Q8IUC8 556 aa7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 IGDCC3Q8IVU1 814 aa7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 SLITRK4Q8IW52 837 aa7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 NXPE1Q8N323 547 aa7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 DCBLD1Q8N8Z6 715 aa7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 CCHCR1Q8TD31 782 aa7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 DTX3LQ8TDB6 740 aa7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 SLCO2A1Q92959 643 aa7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 PMEPA1Q969W9 287 aa7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 MAGOHBQ96A72 148 aaKnown RBP7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 PRR11Q96HE9 360 aaPredicted RBP7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 CDKN2AIPNLQ96HQ2 116 aa7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 RMDN2Q96LZ7 410 aa7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 FCRL3Q96P31 734 aaPredicted RBP7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 SERPINB12Q96P63 405 aa7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 RANBP9Q96S59 729 aa7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 CCDC3Q9BQI4 270 aa7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 SLC13A1Q9BZW2 595 aa7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 ACBD3Q9H3P7 528 aa7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 TRIM39Q9HCM9 518 aa7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 SRA1Q9HD15 236 aaKnown RBP7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 PRDM8Q9NQV8 689 aa7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 HAUS2Q9NVX0 235 aa7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 OGFRQ9NZT2 677 aa7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 SLC17A6Q9P2U8 582 aa7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 ATXN7L1Q9ULK2 861 aaPredicted RBP7.09□□□□□ -1.27
TOPBP1-207ENST00000509162 NEUROG3Q9Y4Z2 214 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms