RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 SETD9Q8NE22 299 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 ARRDC3Q96B67 414 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 ZNF570Q96NI8 536 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 REEP2Q9BRK0 252 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 ISCUQ9H1K1 167 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 ADAM7Q9H2U9 754 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 PABPC3Q9H361 631 aaKnown RBP3.88□□□□□ -1.79
NEDD4-209ENST00000508871 ABHD16BQ9H3Z7 469 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 TRPV5Q9NQA5 729 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 NINJ2Q9NZG7 142 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 BFARQ9NZS9 450 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 TSPAN16Q9UKR8 245 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 PLEKHM1Q9Y4G2 1056 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 NFS1Q9Y697 457 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 STON1Q9Y6Q2 735 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 TMEM82A0PJX8 343 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 CYTH3O43739 400 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 TBX10O75333 385 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 GCNT3O95395 438 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 FCER2P06734 321 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 PTBP1P26599 531 aaKnown RBP eCLIP3.88□□□□□ -1.79
NEDD4-209ENST00000508871 GNA11P29992 359 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 RRM2P31350 389 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 GCKP35557 465 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 FDFT1P37268 417 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 NSFP46459 744 aaKnown RBP3.88□□□□□ -1.79
NEDD4-209ENST00000508871 GAD2Q05329 585 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 SNTB2Q13425 540 aaKnown RBP3.88□□□□□ -1.79
NEDD4-209ENST00000508871 TRIM25Q14258 630 aaKnown RBP3.88□□□□□ -1.79
NEDD4-209ENST00000508871 R3HDM1Q15032 1099 aaKnown RBP3.88□□□□□ -1.79
NEDD4-209ENST00000508871 DUSP28Q4G0W2 176 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 C4orf48Q5BLP8 95 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 ZNF529Q6P280 563 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 MEX3BQ6ZN04 569 aaKnown RBP3.88□□□□□ -1.79
NEDD4-209ENST00000508871 TMEM179Q6ZVK1 233 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 EFCAB13Q8IY85 973 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 ABI1Q8IZP0 508 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 IL31RAQ8NI17 732 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 TCP11Q8WWU5 503 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 RAB7BQ96AH8 199 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 SDCCAG3Q96C92 435 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 KREMEN1Q96MU8 473 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 METTL8Q9H825 291 aaKnown RBP3.88□□□□□ -1.79
NEDD4-209ENST00000508871 SMURF1Q9HCE7 757 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 C6orf50Q9HD87 102 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 IL17RBQ9NRM6 502 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 KLC4Q9NSK0 619 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 MYOTQ9UBF9 498 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 CDC42EP3Q9UKI2 254 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 VPS9D1Q9Y2B5 631 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 EMC9Q9Y3B6 208 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 ITGB1P05556 798 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 GALTP07902 379 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 KRT16P08779 473 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 GPR3P46089 330 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 NR2C2P49116 596 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 PGDP52209 483 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 RAD23AP54725 363 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 C21orf59P57076 290 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 SSTP61278 116 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 PRKCZQ05513 592 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 ZNF844Q08AG5 666 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 ALCAMQ13740 583 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 DGCR6Q14129 220 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 LARS2Q15031 903 aaKnown RBP3.88□□□□□ -1.79
NEDD4-209ENST00000508871 MAN2A1Q16706 1144 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 DGKDQ16760 1214 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 FUT11Q495W5 492 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 TTMPQ5BVD1 217 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 ZNF484Q5JVG2 852 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 CEP85LQ5SZL2 805 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 NAIF1Q69YI7 327 aaPredicted RBP3.88□□□□□ -1.79
NEDD4-209ENST00000508871 APOBEC3HQ6NTF7 200 aaKnown RBP3.88□□□□□ -1.79
NEDD4-209ENST00000508871 SLC15A3Q8IY34 581 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 RTL3Q8N8U3 475 aaKnown RBP3.88□□□□□ -1.79
NEDD4-209ENST00000508871 SPATA4Q8NEY3 305 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 DNAJB14Q8TBM8 379 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 GIMAP1Q8WWP7 306 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 LPGAT1Q92604 370 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 LENG1Q96BZ8 264 aaPredicted RBP3.88□□□□□ -1.79
NEDD4-209ENST00000508871 SMOQ99835 787 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 PARVGQ9HBI0 331 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 MED4Q9NPJ6 270 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 HAO1Q9UJM8 370 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 NUDT5Q9UKK9 219 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 AMFRQ9UKV5 643 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 CBLCQ9ULV8 474 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 PCDHA7Q9UN72 937 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 TNFSF13BQ9Y275 285 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 CDY2AQ9Y6F7 541 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 ZSWIM8A7E2V4 1837 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 E5RGE8 158 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 TNFAIP8O95379 198 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 LDLRP01130 860 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 TK1P04183 234 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 ADSSP30520 456 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 SERPINB1P30740 379 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 ARL4AP40617 200 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 CCR4P51679 360 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 EMP3P54852 163 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms